Procambarus clarkii (red swamp crayfish): 123768167
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Entry
123768167 CDS
T07930
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123768167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123768167
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123768167
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123768167
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
123768167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Motif
Other DBs
NCBI-GeneID:
123768167
NCBI-ProteinID:
XP_045614521
LinkDB
All DBs
Position
59:22430046..22447028
Genome browser
AA seq
1716 aa
AA seq
DB search
MDTLYRFIMGSQETECSQWEHLPSETRNTNGAVSVQAISDVQSNEEQDSASEMKMSLMPS
NNILRNLLSGGGESNNMAAIGNKSSVAQELQDQDDELRALGISVVDQLSLERDVEAAVDK
AVTKHTRKQRLQILKKEIKDIHMNVKQADNKLLELKNRLAGMRQRVVDPRMTIGVEKEVK
DKARDLGVLRAREIYLRRKLSSAEVNEEELDDYDLEDGEICDDDCDDIGEGQIAPRLSGN
ERARLIREGQMTPFGTTMTSGASRTVSVRPGQAVMKEGRTVLTSQEKSIKKGPTKAELIS
SGEMTPFGTVIKMSNNNSAKTPIRSPEKLQGGFSDFEKYLKDQIDRQKQHSQANKGSRPK
KSSGDAKYGVPKKRKRKIKEYIGNFDNEEVDDEEEDDGTSLSSIKKCAKEGYESKLNKIR
DLEEKTKKSAKKNPLKMHILHPKKKKIEKVSGSITSYLESDQLKRTPRKILSERVSLGGS
ESEDFDVESGSGSEYVPSDQDILEEDGDLWDEKSNVENADIDKRENHHKKKLSKRIKKLK
KKIDKDEDEWSEDDIPKSKGQKVCKSRDDGNLDEYVRRIENWKEERLKRKQDKILRGEDL
DSEEEEEEGYEEFDGGFKIPLLIWNKLYKYQRTCVKWLWELHMQSCGGILGDEMGLGKTI
QIIAFLVGLSYSRLTSRQAPWKGLGPVLIVCPATVLHQWVKEFHKWWPPFRVAVLHESGT
FIGTRSALIHNINRYEGILVTSYTGARDQLETMLQYSWHYIILDEGHKIRNPEAQITVAL
KRFQCPHRLILSGSPIQNSLKELWSLFDFVFPGKLGTLPVFLQQFAVPITQGGYANASKL
EVQTAFKCASVLRDTINPYLLRRMKNDVRNHLNLPDKNEQVLFCGLSEEQRKIYREYIEG
DQVKRILGGRMKVFVGLINLRKICNHPDLYTGGPHTFDDNYDFNLQPELKYGWWARSGKM
HVLHSVLHLWLRQGHRVLLFTQSRQMMCILEKFLMDEHYCYLKMDGTTSVSSRQPLIEKF
NNDPSYFVFLLTTRVGGLGINLTGADRVVIFDPDWNPSTDSQARERAWRIGQLRHVTIYR
LVTAGTIEEKIYHRQIFKQFLTNRVLKDPKQQRFFKTNDLYELFSLNEGDKEKTESSAIF
AGTGSEIKVELKEKTSNVQTRPSGALSNNKSGSHQRMEARTEKAPSRQLNNNQIEYENKK
IKFEERSSDKNKEQGSVAQNTKMEQMRELAKRLSQKIGVKVLPKQEKQKTEEQEGNSKAE
IANASDSSVNDVDSVKGKNQIVIGEDVQKAELHNMMQAKTTEAAPVFTKDPCEVSTSNLE
NTCITLNCDIKDSEDLSNASVKFSTEMNKNASTFSDNSHKMHKAVINSDIKGKDVCQPGG
LKCTSNSGMLISEIPEKHKKKHKKKDKHREREKKEYIKKKGRKFEGERIEFLVKKRAYRK
TEEEEEAEKKSAMSQDQYVLEKLFRKSGVHTALSHDAILSNDDPDYLLLEGEAERVAKEA
VKAVRASRAQCFRPQLPDGSSQSLKRKPKFGNKKSTMFMDVDKDTSEGKERKKDKKRPMF
SGCIDESDDDDTSNTNDGKELGSFSKLKSKAEGSSGLLSSSQLLSRMRERNKGISTDCDN
DDSDYDPEYPSTATVSIESIEPEIQNNIDILTDIRNFVAFQAEVDGKASTQEIINRFKDR
LPPQQTPFFKALLTQICDFHREVSGKGIWSLKGEFR
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggacacattatacagattcatcatgggaagccaagagacagaatgttctcagtgggaa
cacttgccctctgaaaccagaaatacaaatggggctgtaagcgtgcaggcaatttcagat
gtgcagtcaaatgaagagcaggattctgcttcagaaatgaagatgagcttgatgccatct
aataacatccttcgcaacttgctaagtggaggaggggaaagtaacaacatggctgcaatc
ggtaataaaagttcagtagctcaggaacttcaggatcaggacgatgagctgagagccctt
gggatctcggttgtggatcagctgtcactggaacgtgacgtggaagcagcagttgacaaa
gcggttaccaaacacactcgtaagcagaggttacaaatactgaagaaagaaatcaaagac
attcatatgaatgtcaaacaggcagacaacaagttacttgaattaaaaaatagacttgca
ggaatgcggcagcgtgttgtggatcctcggatgactattggtgttgaaaaagaagttaaa
gataaagctcgggatcttggagtcctcagggcacgagaaatataccttcgccggaaactt
tcatctgctgaagtgaatgaggaagagcttgatgattatgacttagaagatggtgaaata
tgtgatgatgactgtgatgacattggggagggtcaaattgcaccaaggttgtctggaaat
gaaagggcgagactaattcgggaaggccagatgacaccctttgggacaacaatgacctct
ggggccagcagaacagtgtcagtcaggccaggccaagcagtaatgaaggagggtagaaca
gtgttaacctctcaagagaaatcaataaaaaaaggtccaaccaaagcagaactgattagt
tctggagaaatgactccatttgggactgttatcaaaatgtccaataacaacagtgctaaa
actccaataagatcgccagagaaactacaaggaggttttagtgactttgagaaataccta
aaagaccagattgatagacaaaagcaacacagtcaagctaacaaaggtagtagacccaaa
aagtcttcaggagacgcaaaatatggtgttccaaagaagagaaaacgaaaaattaaggaa
tatattggaaactttgacaatgaggaggttgatgatgaggaggaggatgatggcacttca
ctctcatcaataaagaaatgcgctaaggaaggctatgaatcaaagctcaataaaatccga
gatttggaagaaaaaacaaaaaagagtgcgaaaaaaaatccacttaaaatgcatatatta
catccaaagaagaagaagattgaaaaagtctcggggagcataaccagttatttggaatct
gatcagctcaagagaactcctcgtaaaattctatccgagagggtcagtttaggaggaagt
gagtcggaagactttgatgttgaaagtggaagtggctctgaatatgttccatcagaccag
gacattcttgaggaagatggtgacttatgggatgagaagtctaatgttgaaaatgctgac
attgacaagagagaaaatcatcataaaaagaaattgagtaaaagaattaaaaaacttaaa
aagaaaattgacaaagatgaagatgaatggtcagaggatgacattccaaaaagcaaaggg
caaaaggtttgcaaatcaagagatgatggcaatttagatgaatatgttagaagaatagaa
aattggaaggaagaaagacttaaaaggaaacaagataagattttgcgaggagaggatttg
gattcagaggaggaggaggaggaaggttacgaggaatttgatgggggtttcaaaattcca
ttactaatttggaataaactttacaaataccagcggacttgtgtgaaatggctttgggaa
cttcacatgcagagttgcggagggatccttggggatgaaatgggacttggcaaaactatc
cagataatagcctttttggttggattatcttattcccgcttgactagccgtcaagcacca
tggaagggcctgggtcctgtgttgatagtgtgcccagctacagtgcttcaccagtgggtg
aaggagttccataagtggtggccaccattcagagttgcggttttgcatgagtcgggaact
ttcattggaaccaggtctgctcttatacataatattaataggtatgaaggcatcctagtg
acatcttacaccggggcacgggaccagctggagacaatgctacagtacagttggcattac
attattcttgatgaaggacacaagattcgcaacccagaagcacagattactgttgctcta
aaaagattccaatgtcctcacaggctaattctctctggttcaccaattcaaaacagcttg
aaggagttgtggtcactatttgacttcgtatttccgggtaagctgggaacattgccagta
ttcctgcagcagtttgcagtacccatcacccaaggaggctatgctaatgcttccaagcta
gaggtacagacagcatttaaatgtgcctctgtgctgcgtgacaccatcaacccgtatttg
cttcgcaggatgaaaaatgacgttagaaaccatctcaacttgccagacaaaaatgaacag
gtgctcttttgtggactgagtgaggagcagaggaaaatatacagagagtacattgagggg
gatcaagtgaaacgcatactgggtggcagaatgaaggtttttgttgggttgattaatctt
cgcaaaatttgcaaccacccagacctttacacaggaggtccacacacctttgatgacaat
tatgattttaatcttcagccagagctaaaatatggttggtgggcacggtctggaaagatg
cacgtgttgcactccgttctgcacttatggctacgtcaaggtcatcgggtgctgctcttc
acacagtcacggcagatgatgtgcattcttgagaaattccttatggatgaacattattgc
tacttgaagatggatggaacaacatctgtgtcctctcgccagcctttgattgagaagttc
aacaatgacccttcatacttcgtatttctcttgacaactcgtgtgggtgggcttgggatt
aatctgacaggagccgatagagttgtaatatttgacccagactggaatccatcaacagac
tctcaagctagggaacgtgcttggaggattggacagttacgtcatgttaccatctatcga
ttagtgacagctggtacaattgaggagaaaatctatcacaggcaaatttttaagcagttt
ctaacaaaccgtgttctcaaggaccccaaacagcagcggttcttcaagacaaatgacttg
tatgaactgttctctttaaatgaaggcgataaagagaaaacagaatcttccgccatattt
gctggcactggctcggaaataaaagtggaactcaaagaaaaaacaagcaatgtacagact
cgaccatctggagctctgtctaataataaatctggaagtcatcagagaatggaagccaga
accgagaaagcaccttcaagacaacttaataataatcaaatagaatatgaaaacaagaaa
atcaaattcgaagaaaggtcaagtgataagaacaaagaacagggtagtgttgcacaaaat
accaagatggaacaaatgagagaacttgcaaagcgcctaagccagaaaattggagttaaa
gttttgccaaaacaggaaaaacaaaaaacagaggaacaagaaggaaattcaaaagctgaa
atagctaacgctagtgacagttcagtgaacgatgtggatagtgttaagggaaaaaatcaa
atagtcataggggaagatgtgcaaaaggcagaattgcacaatatgatgcaggccaaaact
acggaggcagcaccagtatttacaaaagatccatgtgaagttagtacaagtaatttggag
aatacatgtattacattaaattgtgacatcaaggatagtgaggatttgagcaatgcttct
gtaaagtttagtacagagatgaacaaaaatgcaagtacattttcagataatagtcacaaa
atgcacaaagctgtaatcaacagtgacattaaaggcaaggatgtctgtcagccaggtgga
cttaaatgtacaagcaactcgggtatgttaatctcagaaatacccgagaagcataaaaag
aagcataagaaaaaagacaaacacagagaaagagaaaaaaaagaatatattaaaaagaaa
ggtcgaaagtttgaaggagaacgcatagaattcttggttaagaaaagagcttaccgtaaa
acggaggaggaggaagaggcagaaaagaaaagtgcaatgtcacaggatcaatacgtgttg
gaaaaattattccgaaaatcaggtgttcacacagcactgagtcacgacgctatcttgagc
aacgacgaccctgattatttgctcctggagggggaggcagagcgtgttgccaaggaagcg
gtgaaagctgtgagagcatctcgggcacagtgtttcagacctcaacttcctgatggttct
tcacagtcacttaaaaggaaacctaaatttgggaataagaaaagtacaatgtttatggat
gtggataaagatacaagtgaggggaaggaaagaaagaaagataagaaaaggccgatgttc
agtggatgtatagacgagagtgacgatgatgacacttcaaacacaaatgatggcaaggaa
ctcggttcatttagcaagctgaaaagtaaggccgagggatcaagcggtttgttgtcgtct
tcacagcttctctctcgcatgcgtgagagaaacaagggcatttccacagactgtgataat
gatgacagtgattatgatcctgaatacccttcaacggctacagtcagtattgaaagcata
gaaccggagatacaaaataacattgacattttaacagacattcgtaattttgtggcattt
caggctgaagttgatgggaaagcctcgactcaagaaatcataaacagatttaaagaccgc
ttgcctcctcaacagacgccattcttcaaagctcttttgacacaaatatgtgattttcat
agggaagtatctgggaaaggaatctggtctcttaaaggagaatttagatag
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integrated database retrieval system
