Procambarus clarkii (red swamp crayfish): 123768204
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Entry
123768204 CDS
T07930
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123768204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcla02000
]
123768204
Transporters [BR:
pcla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123768204
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123768204
NCBI-ProteinID:
XP_069163049
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Position
59:complement(21127193..21212792)
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AA seq
719 aa
AA seq
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MAARANQDREAALLPARVRPSLPNLASTPAGVGASALSTTIHVTENPLAAPSTKTHKGKA
DSKLPPLTTTTNASITTTTVNATSNSTSNDASPNSDSKPNLPLSDSSRPDVTQCDQSKAT
ATTLPPTALPPTVLPPTTSPNSDPPPPYQLASDKVPQCPKWTENEPERDTWGKKVEFLLA
VVGFAVDLGNVWRFPYICYQNGGGAFLVPYVIMLVFGGLPLFFMELALGQYHRSGCLTVW
RRICPMLKGIGYAICIIDLYMAMYYNTILAWSVYYLVASFGSELPWTSCDNDWNTPNCTL
TANVHNATDKSSTVSPAKEFFRKEVLEVDKSTGLGDLGPVKGSLALCLFSVFVLVYFSLW
KGVKSSGKAVWVTALMPYVVLLILLVRGVTLPGATSGILYYLTPRFQMLDKPKVWVDAAT
QIFFSLGPGFGTLLALSSYNKFHNNCYRDALLTSSINCLTSFLAGFVIFSVLGYMAHVQN
KDISEVGEEGPGLVFTVYPEAIATMTGSVFWSIIFFLMLITLGLDSTFGGLEAMITGLCD
EYPRLLGRHREIFVLCLLIFIYVCALPTTTYGGMYIVDLLNIFGTGNPILFIVFVEATAV
CWFYGAERFADDIEKMLGFRPGRFWIVCWKFISPTFIFVLFVCSFALGDGAAYLNLPPWA
VVLAWVLTCSSIVCIPLYIIYMFIITPGTFKERIKAMIKPEEYNPPQLSQINSNYGTHV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgcgcaaaccaggatcgcgaggccgccctcctccccgcccgcgtacgccca
tcgctccctaacctcgcctctactcctgcgggcgtgggcgcctccgctctctccaccacc
atccacgtcaccgagaaccccctggccgcgccttccaccaagacgcacaagggcaaggct
gacagcaagttacctccgctcaccaccaccaccaacgcctctatcaccaccactaccgtc
aacgccacctccaattccacctccaacgatgcctccccgaactctgactccaagcccaat
ctccccttgtccgattcgtctcgccccgacgtgacgcaatgtgatcagagcaaggctaca
gccaccaccctgccgcccaccgccctgccgcccaccgtcctgccgcccaccacctcgccc
aactccgacccgccgccaccctaccagctcgccagcgacaaagtcccccagtgcccgaag
tggacggagaacgagccggagcgggacacctggggcaagaaggtggagttcctgctggcc
gtggtgggcttcgctgtcgacctcggcaacgtctggaggttcccctacatctgttaccag
aacggcggaggggccttcctggtgccgtacgtgatcatgctggtgtttgggggacttcca
ctgttcttcatggagctggcgcttggtcagtaccaccgtagtggctgtctcactgtctgg
cgtcgtatctgtcccatgctcaaaggcatcgggtacgccatctgcatcatcgacctgtac
atggctatgtactacaacaccatcctggcgtggagcgtgtactacctggtggcctccttc
gggagcgagctgccctggacctcgtgtgacaacgactggaacaccccaaactgtaccctc
actgccaacgtccacaacgccactgacaagtcctccaccgtctcccctgccaaggagttc
ttcaggaaggaggtgctggaggtcgacaagtcaacgggactcggggacctcgggccggtc
aagggctccctggctctctgcctcttctcagtcttcgtcctcgtctacttctccctctgg
aagggagtcaagtctagtggaaaggcagtgtgggtgacggcgctgatgccgtacgtggtg
ctgctgatcctgctggtgcgaggcgtcaccctgccgggggccaccagcggcatactctac
tacctcactccgcgcttccaaatgctcgataaacccaaggtctgggtcgacgccgccacc
cagatcttcttcagtctgggacctggttttggcaccctgctggccctctcctcctacaac
aagttccacaataactgctacagggacgcgctgctgacctcctccatcaactgtctgacc
agcttcttagcggggttcgtgatcttctcagtcttgggctacatggcacacgtccagaac
aaggacatctctgaggtcggcgaggaaggtcccgggctggtgttcacggtgtatcctgaa
gccatagccacaatgaccggttcagtcttctggtccatcatcttcttccttatgctcatt
acgctcggtctggacagcaccttcgggggcctggaggcgatgatcaccggcctctgtgat
gagtaccctcgcctcctaggtcgccacagggagatcttcgtgctgtgtctcctcatcttc
atctacgtctgcgccctgcccaccaccacctacggcggcatgtacatcgtggacctgctg
aacatcttcggaacagggaaccccatcttgttcattgtgttcgtggaggcgacggctgtc
tgctggttctacggcgccgagcggttcgccgacgatatcgagaagatgctggggttccgt
cccgggcggttctggatcgtctgctggaagttcatctccccgactttcatcttcgtgctg
ttcgtgtgctcgtttgcgctgggtgacggggcggcgtacctcaacctcccgccgtgggct
gtggtcttggcctgggtcctcacctgctcctccatcgtctgcatccctctctacatcatc
tacatgttcatcatcaccccgggcaccttcaaggagcgcatcaaagccatgatcaagcct
gaggagtacaacccaccacagctcagccagatcaactccaattacggaacacatgtttaa
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