Procambarus clarkii (red swamp crayfish): 123768257
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Entry
123768257 CDS
T07930
Name
(RefSeq) polycystin-1-like
KO
K04985
polycystin 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcla03037
]
123768257
04812 Cytoskeleton proteins [BR:
pcla04812
]
123768257
04040 Ion channels [BR:
pcla04040
]
123768257
04091 Lectins [BR:
pcla04091
]
123768257
Cilium and associated proteins [BR:
pcla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123768257
Cytoskeleton proteins [BR:
pcla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
123768257
Ion channels [BR:
pcla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123768257
Lectins [BR:
pcla04091
]
C-Type lectins
Others
123768257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
REJ
PKD_channel
Ion_trans
PLAT
PKD
WSC
GPS
Motif
Other DBs
NCBI-GeneID:
123768257
NCBI-ProteinID:
XP_045614675
LinkDB
All DBs
Position
59:complement(21253269..21290356)
Genome browser
AA seq
3030 aa
AA seq
DB search
MRQMAYRLPTLLLQLLVAVASASAGVAFIEGGCYKDNIVQPWVTLSGGGYSPEDLSPETC
KDFCGRLHFCYCAVDEGQYCYCLQTLGTLVSATGECTAVCADGSECGGLTAGVLTVWQTS
VLSGHLNFTLNLNTTVIAVGTNVVLSVYATGAWVTNWGDGAIFVTNGTTHTYNTPGEFTI
VAFLEKVPNVWDGVIVTVISKPNATLLCPPYMTVGEPSVCPLVTSSQGVDSVLTATFNEP
GVPQTSYRIPAGRTLSYGAILNNLTYYNSEYVNTPTAIMIHTDPVRTGYLTKIRIWAASA
GWVVLYALSPTCDTGTYYCSETQLCNADCSPEYFNQTCSSHLCAMQGKCSGPACTEGTVP
AWSTMQYRLVHSFYVSTLNVEFSYVLDTTLVEVYDDELLAVGCLDASHCASDPLDIKTRA
RHPTEDPDLIFSYVDGTTATVVGNITGKLLVNVDVSEHVLVNMSYRVNCSTASSMSSVPT
PYTATTAAYSLMGVYNLSYVIVSDLWGAASAWTGKAAVSCQDLVGDPVLEEEVWIPLLIN
TPFVITFTQGAPLFSSLDWGLGIMYTYYPNATNVDWTLHLNYTKTGNFTFIGNASNAVSW
VNYTSLIHVVPVVSNKWNATTLCPCLAVAEGFNISLDLPSAPNPPFSAYIYATYANGMLF
PNETLEFGTSGGGGAAQALKKLFHTTILQPGNYTLTFLLRNEVSNTTVTTTVMVEEGLAN
VSFTTKFILDGVTMPGMGPLNNIFMDNTTIFFTPACLKGFPSVVKWRLTLFPSGQVLYTT
ANRNQTLTHVFNTSGEYYTVVSGYNPVQGWVNSDPVLMVVLSQLEGFVLNDDGRVIEPNN
TKIVNANFTVLPPLSCMLISYCDGCADQTFGYKDMCLARFPTINYGGGPLTNPMSLPRVY
TQEGIYTVKGLAWDLRVSYTSELQVVIAVLPCSMPEVEIVDRYKLFSQPQVNQRSMPLVK
ATKAKIECNGTVPVSRWWNILKVEDTTGLPQKTIQVEGLLSSWNNAQLDLSPLFLDLGLY
KLSYWIRLNASKIFPLQREDYTYLKIIPTPLRAVMMGGSVFSVSRGFGQTLDLDPQGLST
DPDNPDDKNFTVTWWCRQVSPVLETFAVTSSGKIAVFNLQLIPAPKTAENLTEGGCFGKG
PGTIQYSGGSMTLVTSSFVKASATYEVYVRITKDTREANTSIQVEVTRFPPPSVQVKCVD
EKLCMPFNGGLLVNPSSRLALVGACIADCDANMKQEWTIMDMAGNSVVETDTVNAGTVFM
TLKTTLDFAANPLFFDINPNVERFRFRLTMTKETLTSGFAEVIVIPNGPPKSGTCSLNTN
TLRALLDSTMASCNNWKDPEGIGITAYTFYYREKGQLKTMASSGFNSVNLIFPVGVFDVR
CKIEDKFGSYVDVAVGPVNASMISKEEFQSYNPSSVLRNLAAIGDQTTMAMALMAIASVK
EHADWLSLSDSSFGNMSDSEVNSRLSEVSNMNKEALDFAADTMDFASLSQLSVGAGVLKS
AACGVLTQEKAAFTVDMAFREKSLQFMKKMEAKLKVTPVYSPYDLRPFVTCILDAAVCLL
KSMNEVIENPILSPPGDLAKASSLDYETGIDKTRIGFAIPLDAATQMRLNVMEITRQRAK
TVVVQLFDVVDSLTTHILTKSVVGDEINELCESGAGLLAQKTSEIMLSDNEFEIRPENSL
NASVIFPKTFCPSQIIDKNTDCSQVAGFTAVVWPCLTHVYPESKTYLSKQTTVMTLKVFV
GNNNITISNETMPIILSIPRRPETLAQPQPVVGRTRVNSHVPFVYHSFNISSVDSAFTVE
ISPDGDVPPKLVILIDYLKFPTPSTYDMISFVKNLTRDENGTYSWFVNNIDNKNRTGSVS
LALAILTDSATLPKPRSNNTLQREDYSDNFNFNYKFRVITSGCYFYNDTIDIWSGIGMNV
VNANTTHTICKTNHLTSFGSGYFHSNDTFNYSYIFAAAGFINNLTVYLVLIFTLVWYILM
MIWARFKDRRDVQYRGVTALHDNNVKDKYLYEITFTTGPDKEAGTDSNIKFSISGEYDET
DVRTLPPSEGRRYHRYCVDAFVMSTPGPLGNIYNLRIWHDNTGRSPFDSWQLQTVVIRDL
QTREKYIIKANTWLAFDRGEKKIDALLEPSDSDAHETFVTDFYNKGNRSVNEDHMWLSIF
LRPTGSRFSRKERVSVVALYLYLSMLINAMWYQTCSDTPRTGIFEFSTFTFSYSQITVGL
VSGVVSYPVILLLIFIFKRARPLKLKKCRALEAAAKQRRNQQNESGIQIEDDDLLDNYDL
MSPQSSENRSKDVSPVICIPWWTRWLAWLVILGGMGACAFFVWSYAIMWGEIKTVKWFSS
FVISFFISILCTQWLKVIFATTIGVICCKAKDTLTQDIDCDEELPDLRYDEEWNNVQPMD
PSTHKVLGIGGVDASEPEIAALTTRLTKKREMNFVIRDVSMYCIFLVVLFVLVNGQTNYN
AFLLQAQMTNTFIRIGDKDFDFSAKVTTRDQFWHWAHNVILQQLRAQRWYNDDPPYGLRG
FLDDRANRLLGYGIIRQIRSDPNACRVPYLMRGFIKECSGRQGAIREETRNFCDGWSVLE
GASRLCRQDEFRYKTDSELRTFSTQGILSTYGGGGYVISLNSLQVDDAKKLKTMQEMGWI
DKYTRAVIVEFSVFNANVNLFATCSIMAEFNEGGGITPNWRFEPVQLLANTGFFGYIESL
CQILFVIATILFTLWELWKIKQMKCEYFSSYWNIAEICIILTSYATIYVFVERYFLTKAA
IEVFNNTYGDGYVRLDSAIEKYKVYLYLIAIIVFFSSLKLIKLLQFNKRMNGLALTIRGC
WDELSMFFIAFCIVFIAFCTLFYYMFMAAIIDFSSMVLSVETSFSMLLGKFDFDIMYQAN
SISPIMFFAFSIINTVILINIMLTIIMQAYTEVKKELENLENKYDVIDFVWTSMRQTLRL
EKEPDNSVAPKVLGVSLDKGDSDNTSAEELPDKVNQLMQYISDVYFDGRLNLNDQAAVKQ
IAQGQLPAAAFEPYTSKSLKGGQQFAAFSD
NT seq
9093 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagatggcatacagactgcccacgttgcttctgcagctgctggtggccgtagcc
tctgccagtgctggggtcgcttttatagaaggaggttgctacaaggataacatagtgcag
ccatgggtgactttgtcgggaggaggctacagccccgaagatctctccccagagacttgt
aaggacttctgcggccgtcttcacttttgttactgtgctgttgacgagggccaatattgc
tactgccttcagaccttgggaacgctggtgtctgccactggtgagtgtacagcagtgtgc
gctgacggctcagagtgtggagggctgacagccggtgtgctgactgtttggcaaacgtca
gttctcagtggccacctcaactttacacttaaccttaacaccactgtcatcgcagtagga
acgaacgtggtgctgtcagtctacgccaccggggcctgggtcacgaactggggtgacgga
gccatctttgtcacgaatggcacgacgcatacttacaacactcctggagagtttacaatt
gttgctttcctggaaaaagttcccaatgtgtgggatggcgttatagtgactgtaatttcc
aagcctaatgccaccctgctgtgtccgccgtacatgactgttggggagccgtcagtgtgt
ccactggtaacatcaagccagggcgtggacagtgttctcacagctaccttcaatgaacca
ggcgtacctcagacgtcctaccgcattccggctggacgaacgctgtcgtatggagcgata
cttaataacctcacatattacaattctgagtatgtgaacacaccgacagccattatgata
catactgatcctgtccgcaccggctacctgaccaagattcgaatctgggctgcctccgct
ggctgggttgttctctatgcactaagcccgacgtgtgacaccggcacatactactgctcg
gagacacaactctgtaatgctgactgtagtcccgagtacttcaaccaaacctgttcatcc
cacctgtgtgccatgcagggcaagtgcagcggacctgcatgtactgagggtacagtaccg
gcatggtcgacgatgcagtacaggctggtgcactcgttctacgtgagcacgttgaatgtt
gagttcagctacgtgctggacaccacactggtggaggtgtacgacgatgagttgctggcc
gtgggctgcctcgacgcctcacactgcgctagtgatcccctcgatatcaaaacaagagcc
agacatcccaccgaggacccagacttgatattctcctatgtagacggaaccacagccaca
gtagtgggaaatattacaggcaaattgcttgtaaatgtagatgtgagtgaacatgtgctg
gtgaacatgagctacagagtgaactgttcaacagcttcctctatgtcatctgttcccaca
ccttacacagcgaccaccgccgcctactccctgatgggtgtctacaatctctcctacgtg
attgtgagcgacctttggggcgcggcgagtgcttggacaggcaaagctgccgtgtcgtgc
caggaccttgttggtgatcccgtgttggaggaggaagtgtggattcccctccttattaac
accccatttgtcatcaccttcacccagggtgctccactcttctctagcttggactggggc
ctcgggattatgtacacgtattatcctaatgcaacgaatgtggactggacgctccatcta
aactacacgaaaactggaaactttaccttcataggaaatgcttctaatgctgtcagttgg
gtaaactatacgagtttgatacacgtggtacctgtggtatccaacaagtggaacgccacg
actctgtgcccttgtttggctgttgccgaagggttcaacatttctctggatcttccatct
gctcctaacccccctttctcagcgtatatctatgccacatacgccaatggaatgcttttt
cccaacgagaccctggagttcggcacgtcgggtggcggaggtgcagctcaagccctcaag
aaactcttccacacgacaatcctgcagcctggcaactatacgctgaccttcctccttcgc
aacgaagtctccaacaccaccgtcactaccactgtgatggtcgaggagggtctggccaat
gtgtccttcacgacaaaatttatcctggatggcgtgacgatgccaggcatgggacctctt
aacaacatcttcatggacaacaccaccatattcttcacaccagcctgcctcaaaggtttt
ccctcagtggtgaagtggcgtctgaccctcttcccctctggccaggtcctctacacaact
gccaatagaaatcaaacacttactcacgtcttcaatacgagcggtgaatattatacggtg
gtgtccggctacaaccccgtccaaggctgggttaattctgaccccgtgttgatggtcgtc
ctcagccagctcgagggcttcgttcttaatgacgacggtcgcgtcatcgaaccgaataac
accaaaatagtgaatgcaaacttcacagtgttgccaccactatcatgcatgttgatcagt
tattgcgacggctgcgccgaccagaccttcggctacaaggacatgtgcctcgccaggttc
cccaccatcaactatggcggcggcccactcactaaccctatgagtttacctcgtgtctat
acgcaggagggaatatacacggtgaaaggtcttgcctgggacttgagagtgtcgtacact
tcagagttgcaggtggtcatcgcagtattgccttgcagcatgccagaggtagagattgtt
gataggtacaagctcttctcccagcctcaggtcaaccaacgctccatgccgcttgttaag
gccaccaaagctaaaattgagtgcaatggtactgtacccgtgagccgctggtggaatata
ctcaaagtagaagacacaaccggtctgccacagaaaactattcaagtggagggtttgttg
tcgtcgtggaacaatgctcagctagacctgtcaccgctcttcctggacctgggcctctac
aagctctcctactggatccggctcaacgcctccaagatcttccctcttcagcgggaggac
tacacatatcttaagattatcccgaccccactcagagctgtgatgatgggcgggtccgtg
tttagtgtgagtcgtggctttggtcagaccttggacctcgacccgcaaggcctctccacc
gacccggataacccagacgataagaactttaccgtgacgtggtggtgtcgacaagtgtcc
ccggtactggaaaccttcgccgttaccagcagcgggaagatagccgtctttaacctgcag
ctgattccagcccctaagacggctgagaacctcaccgagggaggatgcttcggcaagggt
ccaggtaccatacagtacagtggaggcagcatgacgctggtgacctcgagcttcgtcaag
gccagcgccacctacgaggtctacgtaaggatcaccaaagacaccagagaggccaacacc
tccatacaagtcgaagtgacaaggttccctcccccgagcgttcaggtcaagtgtgtggac
gagaagctgtgcatgccctttaatggcgggctgctggtcaacccgtcgtcccgtctggcg
ctggtcggggcgtgtatcgccgactgtgacgccaacatgaagcaggagtggaccatcatg
gacatggcagggaacagtgtggtggagacggacactgttaatgcaggcacagtattcatg
acattaaaaacgacgctggattttgctgccaatcctctcttctttgacatcaacccaaac
gtggagaggtttcgcttcagactcactatgactaaagaaactctcacaagcgggttcgca
gaggtcatagtgattccaaacggtccaccgaagagtgggacatgttcactgaataccaat
actctacgagcactgctggattctacaatggcaagttgtaacaactggaaggacccggag
ggtataggcattacggcttataccttctattaccgtgaaaagggtcaactgaaaacaatg
gcatcatccggttttaattctgtgaatctgatctttccagtgggtgtttttgatgttagg
tgtaagattgaagataaatttggaagttacgtagatgtggctgttggtcccgtaaatgcc
tcgatgatctcaaaggaagagttccagtcctacaatccttcaagtgttcttcgtaacttg
gcagcaataggtgatcagacaacgatggcgatggcgttgatggcgattgcatcagttaaa
gaacatgctgactggctttcattaagtgacagttcattcggtaacatgtcagatagtgaa
gtgaacagcaggctcagtgaagtatctaacatgaataaagaggcccttgattttgcagca
gatactatggactttgcttcactttctcaactcagtgtcggggctggagtcttgaagtcg
gctgcttgtggcgtcttgactcaagaaaaggcagcatttacagtcgacatggcattcaga
gagaaaagtctccagttcatgaaaaaaatggaagcaaagttgaaagtgactcctgtttat
tccccatatgatttaagaccatttgttacttgcattttggatgcagccgtttgcctcctt
aaaagtatgaatgaagttattgagaatccaattcttagtcctcccggagacctggcgaag
gcctcgtctcttgactatgaaacggggattgataaaactcgcataggtttcgcaattcca
ttagacgctgcaacacaaatgagactaaatgtgatggagatcacaagacagagagcgaag
accgtggttgtgcaactgtttgacgtggttgactctctcaccacacacattctaactaag
agtgttgttggcgatgaaataaatgaattatgtgaaagtggagcaggattgcttgctcag
aaaacgtcagaaataatgttatccgacaatgagtttgagatacgacctgaaaatagtttg
aatgcttcagtgatatttccaaagactttttgcccttctcagattattgataaaaacacc
gattgtagccaagttgcaggcttcacagctgtggtgtggccatgcttaactcatgtttat
ccagagagtaagacttacttatcaaagcagactactgtcatgacccttaaagtatttgtg
ggaaataataatattacgataagcaacgaaacaatgccaataatactgtcaattcctcga
cgtcccgagacactggcccagccgcaacccgtagtggggaggactcgggttaatagccat
gtaccctttgtgtatcattcctttaatatatctagtgttgattctgctttcactgtggag
atttctccagacggagatgtgccccccaaattggtcattctaatagattacttgaaattc
ccaaccccatccacgtatgacatgatttccttcgtgaaaaatcttactcgtgatgaaaat
ggaacatattcatggtttgtaaataacatagacaataaaaacagaaccggatccgtttcc
ctagcgttagccattcttacagatagtgctactcttccaaagcctagaagcaacaatacc
ttgcaaagagaggattatagcgataatttcaactttaactacaagttccgtgtgataacg
tccggctgttacttctacaacgatacaattgacatttggtcgggtattggcatgaacgta
gtcaacgctaacaccactcacaccatttgtaaaaccaatcacttgacctcatttggatct
ggatattttcattccaacgatacatttaactatagctacatctttgctgcagcgggtttc
attaacaacctgacagtgtacctggtgttgatattcactcttgtttggtatatattaatg
atgatatgggctcgttttaaggacagaagagatgtccagtatcgaggagttactgccctc
cacgataataatgttaaagataaatatttgtatgaaataactttcaccaccgggcccgac
aaagaggctggaactgactctaatatcaagttcagtatatcgggtgaatatgatgaaaca
gatgtcagaactctcccaccatcagaaggcagacgttatcatcgctattgtgttgatgcg
tttgtgatgagcacacctggacccttaggaaatatttacaacctccgtatttggcatgac
aacactggcaggtcgccatttgacagttggcagctgcagacagtagtgatccgtgacctt
caaacccgagaaaagtatataattaaagcaaacacatggcttgcatttgatcgaggagag
aagaaaattgacgcattgctagagccatcagacagcgatgctcacgagacatttgttaca
gatttctacaacaagggaaacagaagtgtaaatgaagaccacatgtggctatcaatattc
ttgcgacctacaggctccaggttcagtagaaaagagcgagtgtctgtggtggcattgtac
ctgtacctgtccatgttgatcaacgctatgtggtaccagacttgcagtgatacacctcgc
actgggatatttgagttcagcaccttcacattttcttactctcagatcaccgttggcttg
gtttctggcgttgtgagttatcccgtcattcttctactcatatttattttcaagagagca
agacctctgaaacttaagaaatgcagagctctagaagcggcagccaaacaacggagaaat
caacaaaacgaaagtgggatacaaattgaggatgacgacttgttggataattatgatttg
atgtcccctcagtcatccgagaaccgcagcaaagatgtcagtccggtgatttgcatccct
tggtggacacgatggttggcctggctggtcatactgggcggcatgggcgcctgtgcattc
tttgtgtggtcctatgccattatgtggggagagatcaaaacagtaaagtggttctcatct
ttcgttatttccttcttcatatctattctttgtactcagtggctcaaggtgatttttgca
accactattggagtaatttgttgcaaggctaaggacaccctaactcaagatatagactgt
gatgaagaattgcctgacctccgctacgatgaggagtggaataatgttcagccaatggac
ccatctacacacaaggtgcttggcatcggaggggttgacgccagtgaaccagagattgct
gccctaaccacacgtcttacaaagaagagagagatgaacttcgtgatacgtgatgtcagc
atgtattgtatctttttggtggtgttattcgttttggtgaatggccagaccaactacaat
gccttcctcctgcaagcacagatgaccaatacattcatcaggattggagataaagatttt
gatttcagtgctaaggtaaccacaagagatcagttttggcactgggcacataacgtgatc
ttacagcaacttcgagctcagcgatggtacaacgacgatcctccttatggtctcagaggg
tttctagatgaccgagctaatagacttcttggttatggaataatacgacagataagaagt
gacccgaatgcatgtagagttccttacctgatgagaggtttcataaaagagtgttcagga
agacaaggggctatcagagaagagaccaggaatttctgtgatggatggtcagtattggag
ggcgctagcaggttatgtcgtcaggatgagttccgttataaaacagattcagagctacgc
acgttctcgacacaaggcattcttagtacttatggaggcggtggctatgtaatcagcctt
aattcactgcaagtagatgatgcaaaaaaactcaaaactatgcaggagatgggatggatt
gataaatacacacgtgcagtgattgtagaattttcagtcttcaacgcaaatgtaaatctc
tttgcaacttgctcaattatggcagagtttaatgagggtggaggtataacacctaactgg
agatttgagcctgtacaactcttggcaaatacaggattttttggatatattgaaagtctg
tgccaaatattatttgtaattgccacaatcttgtttactttatgggagctttggaagata
aagcaaatgaaatgtgaatacttttcatcatattggaacattgctgagatctgcattata
ctgacatcctatgcaacaatttatgtttttgttgagcgatatttcttgacaaaagcagca
attgaagtattcaacaacacctatggtgatggctatgtcagactcgactctgctatagaa
aagtataaagtgtatctctacttgattgccatcatagtatttttttcctctctgaaactg
ataaagctgctgcagtttaacaagagaatgaacgggctggccctcacaatacgaggctgc
tgggatgaactctccatgttcttcatagctttctgcatagttttcattgctttctgcact
ttgttttattatatgtttatggcggctataatagacttttccagcatggtactgtctgtt
gaaacaagcttctcaatgctacttggcaaatttgatttcgatataatgtatcaagccaat
tccatctccccaataatgttcttcgccttctccattatcaacaccgttatcctcatcaac
atcatgctcacaatcatcatgcaagcctacactgaagtaaagaaagagttagaaaatctc
gaaaataagtatgacgtcatcgattttgtatggacatcaatgcgtcaaacattgaggcta
gaaaaagaaccagacaacagcgtggctcccaaagttctgggcgtgtcattggataaaggt
gattcagataacactagtgcagaggaactcccagataaggtgaatcagctgatgcagtat
ataagtgatgtttactttgacggccgtcttaacctgaatgatcaggcagcagtgaagcag
attgctcaaggtcagttacctgctgcagccttcgagccttacacaagcaagtctcttaag
ggaggacaacaatttgctgcttttagtgattaa
DBGET
integrated database retrieval system
