Procambarus clarkii (red swamp crayfish): 123768488
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Entry
123768488 CDS
T07930
Symbol
smid
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123768488 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcla03009
]
123768488 (smid)
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123768488 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
AAA_22
AAA_28
AAA_5
AAA_33
RuvB_N
nSTAND3
NACHT
AAA_18
RNA_helicase
AAA_14
Zeta_toxin
ABC_tran
Mg_chelatase
Rad17
nSTAND_NTPase5
AAA_24
TsaE
Sigma54_activ_2
TIP49
AAA_2
DUF815
IstB_IS21
Sigma54_activat
ATPase
AAA_17
AAA_29
AAA_30
AAA_19
AAA_7
NTPase_1
NPHP3_N
AAA_25
PduV-EutP
Parvo_NS1
AAA_23
Vps4_C
Cytidylate_kin
T2SSE
RsgA_GTPase
CobU
APS_kinase
ATP_bind_1
PRK
Motif
Other DBs
NCBI-GeneID:
123768488
NCBI-ProteinID:
XP_045615041
LinkDB
All DBs
Position
35:30694527..30715844
Genome browser
AA seq
787 aa
AA seq
DB search
MKRPYFQERTLPARVEKYMNENKYIDVEEMTDYLVNTYREFRGKNKKAFMKSVEKAYEWQ
LYCCQQTEDTSDIEDIMDSDGGGPDIMEIIDPEPPAKANGLNTMLTKMYKSPAVSSPASK
HKISARASQDFFVLDTNGDLGTMSPEKSIKKKRKKDKEGDIEEIIKRKKKKQLLPEQPTI
TFANMAGIESLKDQICDLIGNLKWPGILQPLQKSVLITGPSGSGKTTFAQALAGTTESAI
LRVTATELVGGVSGESEERINEIFEQAASLSPCVLLIEKIDVVAPREGNTKSLEKRIGTQ
LASCLTNLKSKHKDKQVIVIGETSRPENLDWDLRSSFDGEMFMAIPTEIARAQILQLLCN
EALFVGDFDELAHRTPGYVAGDLRKLLEKAQSLAWKRKKDLLYGDTVGSLMEQVRSFINH
FEKMCETEKVNSMATINMEDFLEALMHITPALKREGFPTVPDVTWQDIGGLEEIKRELRE
KILEPIQYSKLHEEFGASRPNGILMWGPPGCGKTLLAKAVANEAGINLLPIMGPELLNMY
QGESERAVREVFKRARNVAPCVIFFDEFDSLCPVRSKGAESGSKTTIVNTLLTEMNGFTK
REDVYVIAATNRPDILDPAVTRPGRFDTLLYVDVPDHLGRVSIFQARTKNGTCPHLASDV
DLEEVSRLCDNFSGADCDQLVYLASKEAIREVIHNSAACIPPTTPAAINNEPAVQRFVAK
RHFAAALRKIKPSVTLEEQKRYKKLHSKLEASKVRGELPGFPDDVSSLAGNIDEQLQFTE
AADNNVQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaccatattttcaagagaggaccctgccggccagggtcgagaagtatatgaat
gaaaataaatatattgatgtggaggagatgacagactacctggtcaacacttatcgggag
tttcgaggcaaaaataaaaaggccttcatgaagagtgttgagaaagcctatgagtggcag
ctgtactgttgtcagcagactgaagacacaagtgatattgaagatataatggatagtgat
ggaggagggccagatatcatggaaatcattgatcctgaacccccagctaaggctaatggt
ttgaacaccatgctgacaaagatgtacaagtcgccagcagtttcatcacctgcttcaaaa
cacaaaatttcggcaagggcaagtcaagatttctttgtgttggacactaatggtgatctt
ggaaccatgtctcctgagaaaagtattaagaagaaacgaaaaaaagataaagaaggtgac
atagaagaaataatcaagaggaaaaagaaaaagcaattgcttccagaacaacctaccata
acatttgccaatatggcaggaatagaatctctgaaggatcaaatttgtgaccttattggc
aatcttaagtggccaggtattctgcaacctcttcagaagtcagttctaataacaggacca
tctggcagtggtaaaacaacctttgctcaggctctggctgggacaacagaatcggccatt
cttcgggtcacagcaacagagttagtgggaggggtttctggagagagtgaggagaggatt
aatgaaatatttgaacaggcagcctctctttccccttgtgtacttcttattgagaaaata
gatgttgttgcaccaagagaaggaaacacgaagagcttggaaaagagaattgggactcag
cttgcctcctgcttaaccaatttaaaaagtaagcacaaagacaaacaggttatagtcatt
ggagaaaccagtcgcccagaaaatttagactgggatcttcgtagcagctttgatggagaa
atgttcatggctataccaacagagattgcccgtgcacaaatactccagctgttatgtaat
gaagcattatttgttggtgattttgatgaattagcccatagaactccagggtatgtagct
ggagacctgaggaagttgttggaaaaggctcagagcttggcatggaaaagaaaaaaagat
ttattgtatggtgacacagtaggaagcttaatggagcaagtaagaagtttcataaaccat
tttgaaaaaatgtgtgaaacagagaaagttaattcaatggctacaatcaacatggaagat
ttcttggaagccttaatgcacatcactcctgcactgaagagagagggcttcccgacagtg
ccagatgttacatggcaggatattggaggtcttgaggagatcaaaagagaactgcgagaa
aaaattcttgagcccatccaatattcgaaattacatgaagaatttggagcaagtcgcccc
aatggaatcttgatgtggggtcctcctggatgtggaaagaccttgctggccaaagctgtt
gcaaatgaggcaggcattaatttgttgccaataatgggaccggagcttttaaatatgtat
caaggcgagagtgaaagagccgtacgagaagtattcaaacgtgcacgcaatgtggcccca
tgtgtcatcttctttgatgaatttgattcactctgtccagtcagaagtaaaggagctgaa
agtggcagtaaaaccaccatagtaaacacactactgacggagatgaatggatttacaaag
cgagaggatgtttatgttatagccgctaccaatcgtcccgacattcttgatccagcagta
actcggccgggaaggtttgacacacttctatatgtagatgtgcctgatcatcttggaaga
gtgtcaatttttcaggctcgaacaaagaatgggacatgtcctcacttggcctccgatgtc
gaccttgaggaagtgtcccgtctctgcgacaacttctcgggtgctgactgtgaccagttg
gtgtacttagccagcaaggaagccatcagagaggtgatacacaactctgcagcttgcata
ccaccaacaactccagcagcaataaataatgaacctgcagtacagcgctttgttgcaaag
agacattttgctgctgcacttagaaagattaaaccatcagtaacattggaggaacaaaag
cgatataagaagctgcacagcaaattggaggcatccaaagtgcgtggagaacttccagga
tttcctgatgatgtaagttcacttgctggaaatatagatgaacagttgcagttcacagag
gctgcagataacaacgtacaataa
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