Procambarus clarkii (red swamp crayfish): 123768702
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Entry
123768702 CDS
T07930
Symbol
PolE1
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03030
DNA replication
pcla03410
Base excision repair
pcla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123768702 (PolE1)
03410 Base excision repair
123768702 (PolE1)
03420 Nucleotide excision repair
123768702 (PolE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcla03032
]
123768702 (PolE1)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123768702 (PolE1)
Enzymes [BR:
pcla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123768702 (PolE1)
DNA replication proteins [BR:
pcla03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
123768702 (PolE1)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
123768702 (PolE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
123768702
NCBI-ProteinID:
XP_045615352
LinkDB
All DBs
Position
83:6149866..6181995
Genome browser
AA seq
2281 aa
AA seq
DB search
MVLQNSGRFRSDKFEKNKDGDASGQDEGSDRRLQQSLENDASDAKFGFSRYKEPQERVGW
LLNMHPTEILNEDKRLVSAVDYYFIQEDGSRFKVSLPYRPYFFVMTKKEVIQDVTTFLSK
KFSGQLASVEVVRKEDLDLDNHLTGLKQTLLKLSFMTVNDLIKVRQSIQSAVKRSKEAAK
SKTVYSEMFSAQFVGESSETNRRMQDHMENLLDMREYDVPYHVRVSIDCKIFVGLWYSVR
GGGTGSPIISRREDLLVWPDCIVLAYDIETTKLPLKFPDANTDQIMMISYMIDGQGYLIT
NREIVSEDVEDFEYTPRPEFEGPFMVFNEANEMALIQRFFDHILEVKPHIFVTYNGDFFD
WPFVEARAAFHNLDMFREIGFSKNREGVYFSRPCIHMDCLCWVKRDSYLPVGSQNLKAVA
KAKLRYDPVELDPEDMCPLAAEQPQILANYSVSDAVATYYLYMKYVHPFILALCTIIPME
PDEVLRKGSGTLCEALLMVEAYHVNIVYPNKQVSQYNKLTSDGRVLDQETYVGGHVEAIE
SGVFRADIPCRFRMVPEAFQKLLDNVDRTIKFCVEVEEGIPLEQVTNYSEVVDDIKKKLV
DLRDTPCRLENPLIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDFNKPGATCQRKMS
WIWRGDVIPASRSEFQRIQQQLETERFPPAFPGMKHRAFHELNKEDQATAEKKRLQEYCR
KAYKKIKETRTEERWQTICQRENSFYVNTVRSFRDRRYEYKGLLKVAKKELTEAQSKGDP
SEIKAANARAVLYDSLQLAHKCILNSFYGYVMRKGSRWHSMEMAGIVCYTGATIITRSRE
IVEQIGRPLELDTDGIWCILPSSFPENYVIKTNNPKKAKVTISFPGAILNVMVKDHYTNH
QYHDLVNPEKLEYSVRSENSIFFEVDGPYQAMILPASKEEGKKLKKRYAVFNFDGSLAEL
KGFEVKRRGELQLIKIFQSSVFEAFLKGDTLETCYASVAKVADYWLDVLYSKAANMPDSE
LFDLISENRSMSRKLEEYGDQKSKSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGAP
VTERAIPLGIFQAEPSVKHHYLRRWLKNPSLTNFDIRNILDWNYYIERLSGTVMKIITIP
AALQGIANPVPRVAHPDWLHKKVLERNDTFKQRRITDMFTAAPKTKPQRRLQTVQEDPDQ
DLFASQDAPDIEDVLAPQSQIPKALGPTVTSSKRKRASDLSKESDDLTKSWRDVLGNPPS
MGNSKEEIMAWITFQKKKWEFQRLQRENQSKRQRTGSYPTIGRVSGRGDTGVVRSGPATT
LGGFLRKTQRTLMDVPWQIIQLAETNTPGLYKLWALVGNDLHLIKLIVPRVFYVNQRVPK
PETEAGGVWRKANKTLPRSHPVYNLYEYTVPEEVFREHSNELMADLSTPDIEGIYETQVP
LEFRAVAQLGCVCVVDKTIARSDTDTFELGQLKFKTVAQFQYLEEGSLSHAYIYHHRSGN
KAMFGIFFYQSKKVHVFVLDTVRSNQMPNLNNLYNAERNAKIAKQCEEALLPESNFVFEI
KFETELRQVYRQIQRVLQGYKDEKRGPTFLAIQSPHDMPTITALMPGLGDFPQVPIHIAD
VDTLYNVLDWQRVGARTMIRHFIGLKQLLHTAMEQSRYFHVPVGNLPRDATAFGADLFYV
RHLQKHNAVMWCSPGARPDLGGHEHDDNRLVAELEETVSAAQINSPGCYSTVCVELDLDA
LAVTTLLQAHHINEMEGTSSSVAFDAAPQASLQDMMGGAESSLTAYDETARCAPAFRILR
QMVAAWLRDVSIYQNVFADFQIIHFYRWLRDSSSLMYDPALHRILHTHMHKLFLHLVAEF
KRLGSIIVFANFNKIVLCTKKRRVEDAIAYVQYIVNSIRGKELFHSIDISFNQCWEYLMW
LDPANHGGIKGKLPKDLSQTEGKDPDENKESDDEGEDQERQKNTDNSEETEDEDGPVIEM
NWNMAEFLPEWCGCQSSFNNVIASYMNAVYEKLQEESGRFTPGNTPMKRKVSSQISRKPA
DALQGFEEFAQDLVSGELAQKLFFITQKIHKKGTSGREEEDDSSSVIISSDSHSIPALEF
VKSITKVLSLDSAVTEQVCKLRRDLLKLLNIGEFSPEAEWKDPCVSYVLPEVICRSCNHC
RNIDLCKDAHQSLENGIHVWLCPVCNTNYASGEIQHQLIDLIHTNSMAHVLQDLQCDRCS
QVKQPNMALYCTCGGLFKTLLKREEFSQKLRVFSRIATIYNMPLLKETIEWMITNNTWIQ
T
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttcaaaactctgggaggtttcgatctgacaagttcgaaaagaacaaggatgga
gatgccagtggacaagatgagggatctgacagacgtctgcagcagagtttggaaaatgat
gctagtgatgccaaatttggcttcagccgttacaaggagccacaggagagggtgggatgg
ctcctcaacatgcaccctacagaaattcttaatgaagacaagcgacttgtgagtgctgtt
gactactactttatccaagaagatggatccagatttaaggtgtctctaccatatcgtcct
tatttctttgtcatgacaaagaaagaagttatacaagatgtgactacttttttgagtaaa
aagttctcaggacaattagccagtgttgaagttgtcaggaaagaagatttggatttagat
aaccatcttactggcttgaagcagacattactgaagctgtcttttatgactgtcaatgac
ttgatcaaggtacggcaatcaattcagtcagctgttaaaaggagcaaagaagcagccaag
tcaaagacagtttactcagagatgttttctgctcagtttgttggagagtcaagtgaaact
aacaggcgcatgcaggaccacatggaaaatctacttgatatgagagaatatgatgtccct
taccatgttcgagtttcaatcgattgtaaaatttttgttggcttgtggtactccgtccga
ggtggtggaacgggatcgccaattattagccgacgggaagacctgttggtgtggccggat
tgtattgtcttggcttacgatattgaaactaccaagttgccacttaagtttcctgatgca
aatactgaccagattatgatgatatcttacatgattgatggccagggttacctcataact
aaccgagagattgtcagtgaagatgttgaagattttgaatacacccctcgaccagagttt
gaaggacccttcatggttttcaatgaagctaatgaaatggcgctcattcaaagattcttt
gatcacatcttagaggtgaaacctcatatctttgtcacatacaatggagacttttttgat
tggccatttgtggaggcacgtgcagcattccacaatttagacatgttccgtgagattggc
ttctccaaaaatcgggaaggagtgtacttctctcgtccctgcattcacatggactgcttg
tgttgggtgaagcgagattcttacctacctgtaggatcacagaatttgaaggctgtggcc
aaagccaagttgcgatatgatcctgtggagcttgacccagaagatatgtgccctcttgca
gcagaacagccgcagatcttggcgaattattcggtatcagatgctgtggccacatattac
ctgtatatgaaatacgtccacccattcatccttgctctctgcactattattcccatggaa
ccagatgaggtgctacgcaagggatcaggcacgctgtgtgaggctctgttgatggtagaa
gcttatcatgttaacattgtgtacccaaataaacaagtgtcccaatataacaagcttact
tctgatggtcgtgttttagatcaagagacctatgttggaggacacgtagaagctatagaa
tcgggagtatttcgtgcagatattccttgtagatttaggatggttccagaagccttccaa
aagttgttggacaatgtggaccgcacaattaagttttgtgttgaagtagaagaaggtatc
ccattagaacaggtgacaaattattctgaagtggtggatgatattaagaagaaactagtg
gatttacgggataccccttgccggttagaaaatcccctgatttaccatcttgatgttgga
gctatgtatccaaatatcattctcaccaatcgacttcaaccatcagctatggttgatgaa
actgtgtgtgctgcctgtgacttcaacaaaccaggtgcaacatgtcaacgcaagatgtct
tggatctggcgaggtgatgtcataccggcatctcgtagtgaatttcagaggattcagcag
cagttagaaactgagcgttttcctcctgcttttcctggcatgaaacacagagctttccat
gagcttaacaaagaggatcaagctactgctgaaaagaagcgtctccaagagtactgtcgt
aaagcctataagaaaattaaggaaacaagaactgaggagcgttggcagaccatatgtcag
cgggaaaacagcttttatgtcaacactgtgagatctttccgagatcgccgatatgaatac
aaaggccttctgaaagtggctaaaaaagagttaacagaggcacaatcaaagggggatcct
tcagaaatcaaggcagcgaatgctcgagctgtgttatatgactccctacagcttgctcat
aagtgtattctcaactcattctatggttatgtcatgagaaaaggatctcgttggcactcc
atggagatggctggtattgtctgctatactggagccactatcatcacccgatctagggaa
attgttgagcagattggtcgtccattggagttagacactgatggcatttggtgcatcctc
ccgtcttcgtttccagagaactatgtcatcaaaaccaataatcctaagaaggctaaagta
accatatcttttccaggagctattcttaatgttatggtgaaagatcattatacaaatcac
caatatcatgaccttgtgaatccagaaaagttggagtactctgtacgatcagaaaactct
attttctttgaggtggatggcccatatcaggcaatgatactcccagcatctaaggaagaa
ggcaagaaactaaagaaacgttatgctgtattcaattttgatggctcattggctgaactt
aaaggatttgaagttaagcgccgtggagaattacagctgattaagattttccagtcatct
gtttttgaagctttcctgaagggggatactctggaaacatgctatgctagtgttgctaag
gttgcagattattggcttgatgtcttgtacagtaaagctgccaatatgcctgattcagaa
ttgttcgacttaatctcggagaatcggtcaatgagtcgcaaactggaggaatacggagac
caaaagtccaagtccatttccacagccaagcgacttgcagagttcttaggagaccagatg
gtgaaggatgcaggtctcagttgtaggtttattatctcaaagaaacctgaaggtgcacca
gttactgaaagggccattccacttggcatctttcaagcagagccatcagtgaaacatcac
tatttgcgccgctggctgaagaatccttcactgactaactttgatatcaggaatattctt
gattggaattactacatagaaagattgtcaggaacagtaatgaaaattattaccatccct
gcagcccttcagggcattgctaatccagtgcctagagtggctcatcctgattggctccac
aagaaggtacttgaaaggaatgacaccttcaagcagcgccgcatcacagacatgttcact
gctgctccaaaaacaaaacctcagagacggctacagactgtgcaggaggatcctgatcag
gatctctttgcatcacaagatgcaccagatatagaagatgttttggcaccacagtcacag
attccaaaagctctggggccaactgtaacaagttccaaacgcaagagagcatcagacttg
agtaaagaaagtgatgacttgactaaaagttggcgagatgtcctgggcaaccctcccagc
atgggtaactctaaggaagaaataatggcatggatcacctttcaaaaaaaaaagtgggag
ttccagcgtttacagcgagaaaatcagtcgaaaagacagcgaacaggaagctacccaacc
attggtagagttagtgggaggggtgacacgggagtagttaggtcaggacctgccaccaca
cttggaggattcctccgcaaaacacagcgtactctgatggatgttccctggcagatcatt
cagcttgcagaaacaaacacaccaggactgtacaaactgtgggcgttggtaggcaacgac
cttcatctcataaagttaattgttccccgtgtgttttatgtcaatcaacgagtgcctaaa
ccagagaccgaggcaggtggtgtatggcgcaaagcaaacaaaacccttcctcgctcacac
cctgtctacaacctgtatgagtacacggttccagaagaggtgtttcgggagcatagcaat
gaacttatggctgacctctccactcccgatattgagggaatttatgaaacacaggttcct
ctggagtttagagcagtggctcagctagggtgtgtatgcgtggttgataaaacaatagct
cgttctgataccgacacatttgaattaggccaacttaagtttaagactgtggcccagttc
caatatttagaagaaggcagcctgtctcatgcatatatttatcatcatcgaagtggcaac
aaagccatgtttggtatcttcttctaccagagtaagaaggtacacgtttttgtgttagat
acagtacgaagtaatcagatgccaaatttaaataatctctataatgctgagagaaatgcc
aaaattgccaaacaatgtgaggaagccctgttaccagaatccaattttgtatttgagatt
aaatttgaaactgaattaaggcaagtttaccgccaaattcaacgtgttttacaagggtac
aaagatgagaagagagggccaacttttctggccattcagtctccacatgacatgcccacc
ataacagctctcatgccaggtttaggagattttcctcaagtgcctatccatatcgctgat
gttgatacattatataatgtccttgactggcaacgggtgggtgctaggacaatgatacga
catttcattggactgaaacaattattacatactgcaatggagcagagtcgatatttccat
gtgcctgttggaaacttgcctcgtgacgccactgcttttggtgccgacctgttctatgtg
aggcacttacagaaacacaatgctgtcatgtggtgctcgccaggtgcgagacctgacttg
ggtgggcatgagcatgacgacaatcgcctggtagcagagctagaagaaactgtgtctgct
gctcagataaacagtcctggttgttactcaacagtttgtgtagagctggatttggatgca
ttagcagtgactacactcttacaggcacatcacattaatgaaatggaaggaacaagtagc
agtgtggcctttgatgctgcacctcaagcttctttgcaagacatgatgggtggggctgaa
tcctctctcacagcttatgatgaaactgcccgttgtgctccagcattcaggattctccgg
cagatggtagctgcttggcttcgtgacgtttccatctaccaaaatgtatttgccgacttc
cagataatacacttctaccgatggttacgagattcaagctcgctaatgtacgaccctgcc
cttcatcgtattcttcacacacacatgcacaaattgttccttcatcttgttgccgagttt
aagcgattgggatctatcattgtatttgctaattttaataaaattgttttgtgtactaaa
aagagaagagtggaggatgctattgcttatgttcagtatatagtaaacagcattcggggt
aaggaactatttcattctattgatatatcttttaatcagtgttgggaatatcttatgtgg
ctggatccagcaaaccatggtggcattaagggaaaactacccaaggatctctctcaaacg
gaaggtaaagatcctgatgaaaataaagaatctgatgatgaaggtgaggaccaagaaagg
caaaagaacacagataatagtgaggaaacagaggatgaggatggtcccgttattgaaatg
aattggaatatggctgaattccttcccgagtggtgtggttgtcaaagcagcttcaataat
gttattgcctcatatatgaatgccgtctatgaaaaattgcaggaagaaagtggccgattt
acgccaggcaatacacccatgaaacgtaaagtgtccagccagatcagtcgaaaacctgca
gatgctctccaaggttttgaagagtttgcccaagatcttgtgtctggagaattggcacaa
aaactgttctttatcactcagaaaattcataaaaaaggaacaagtggaagagaggaagag
gatgactcgagctctgtgattatatcttcagactcgcacagcattccagcactggagttt
gtgaagagcattactaaagttttgtccctggactcggctgttacagaacaggtttgcaaa
cttcgtagggacctcttgaaactcttgaatattggagaattttctccagaggcagagtgg
aaagacccatgtgtttcctatgtgctgccagaggtcatctgccgttcctgtaatcactgc
cgtaacatagacctctgtaaagacgctcatcagtctttggagaatggaatacatgtatgg
ctttgccctgtatgcaacacaaactatgcttctggtgaaatacagcatcagttgattgat
cttatccacaccaactccatggcacatgttctacaggaccttcagtgtgatcgctgctca
caggtgaagcagcccaatatggccttatactgtacgtgtggaggacttttcaagacactc
ctgaagcgtgaagagttcagtcagaaattaagagtcttcagcagaattgcaactatatac
aatatgccattactgaaggaaaccattgaatggatgataacaaataatacttggattcaa
acatag
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integrated database retrieval system
