Procambarus clarkii (red swamp crayfish): 123768828
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Entry
123768828 CDS
T07930
Symbol
mor
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123768828 (mor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123768828 (mor)
03036 Chromosome and associated proteins [BR:
pcla03036
]
123768828 (mor)
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123768828 (mor)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123768828 (mor)
PBAF complex
123768828 (mor)
GBAF(ncBAF) complex
123768828 (mor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
123768828
NCBI-ProteinID:
XP_069172417
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All DBs
Position
83:complement(4769756..4887141)
Genome browser
AA seq
968 aa
AA seq
DB search
MAINPRKDGGPNVKYYESTETVSQFEHVKTWLMKNAKKHVQADPPNNKGLSQLVVQLLQF
MEDNFGPKVTKAPMTKLPMKCFLDFKPGGGLCHILSTVYKFKSDQGWRRFDFQSPSRKDA
NVELFREIEKSLLSNKCWSKPSVFIHGEVDKELRNELKDIVKRHDGKIVDEEEEASHIVY
DEQDPLDDEFARAAMRRDRQTLFHFYYMPDSYDSWASGVELDYDPPESPQFFDGQWKVCA
NWLQDLESYNEWMNEEDYEVDDNGTKKKHRGCLSVDDTMGLSDPDKKKKAKKRPRSPPSP
RSKRKGSRNTTTPGKPVKKTKMEEEEEDLTRDMEDPAPEPTVTEVTTGSKVQPSKGGNYM
DLDEETTEKTEKIEGPGESESADHTAAASYSAQFAAIVKEGGYSPEQPVPDSEDTATDQT
HHIIVPSYAAWFDYNAIHAIEKRGLPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYL
TSTACRRNLAGDVCAVMRVHAFLEQWGLINYQVDADARPTPMGPPPTSHFHVLADTPAGL
QSINPPKVNQPIAAKHMMDFDKKPIDKKPDFSIGTDFGLKLDQYSKKTGALKNKSAASQA
REWTEQETLLLLEALEMYKDDWNKVCEHVGTRTQDECILQFLRLPIEDPYLEDSEVGSGA
TPNALGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRIAASAAKAAMDEFCRIKDEVPAAL
LDSHIKNVADHAATNEGKVDPTAGLGKSGIAGTEPEGEEKKEGEPETEKKDDAKKDSEKK
EEEKKDEGEKEKKDESMEVDKSDEKKTEEKKEGEEEDKKDEKGETKDERKEEISPEEKKL
DAERERLRKDASVQQAASAALGSAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRH
FEELETIMDRERESLELQRQQLLQERQQFHLEQLKAAEMRARQHALHQLTQGASPAHSPA
PSMAQVHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaccccaggaaggatggaggccctaatgtcaaatactacgagtccaccgag
actgtttctcagttcgagcacgttaagacgtggctaatgaaaaatgcgaaaaagcatgtg
caagctgatcccccaaacaacaaggggctgtcacagctggtggtacagctgcttcaattc
atggaagataattttggtccaaaggttaccaaggcccctatgaccaagctgcctatgaaa
tgtttcctggacttcaaacctggcggtggactatgtcacattctaagtacagtgtataaa
ttcaaaagtgaccaaggttggcgtaggttcgactttcagtctccatcccgcaaagatgca
aatgtagaactctttcgggaaattgagaagagtttgctttctaacaaatgttggagtaaa
ccatcagtcttcattcatggtgaagtagataaggaactccgcaatgaacttaaagacatt
gtcaagagacatgacggaaagattgtggatgaagaagaagaagcatcacacattgtatat
gatgaacaagacccacttgatgatgaatttgcacgtgcagcaatgcgtcgtgatcgtcag
actttgttccatttctactacatgcctgattcttatgactcttgggcatctggtgtggaa
ctggactatgaccctccagaatcaccacagttctttgatggccagtggaaggtgtgtgcc
aactggttgcaagacttggaatcttacaacgagtggatgaatgaagaagattatgaggta
gatgacaatggcaccaagaaaaaacatcgtggatgcctgagtgtcgatgacacgatgggc
cttagtgatccagataaaaagaaaaaagccaaaaagagaccacgatcgccaccgtcacct
cgttccaaaaggaaaggatcacgaaacactaccacaccgggaaaaccagtcaaaaagacc
aaaatggaagaggaggaggaagatctcaccagggacatggaggaccctgcccctgaacct
acagtcactgaggttactacaggttctaaagtacaaccgagtaaaggtggaaattacatg
gatctagatgaagaaactacagagaagacagaaaaaattgaaggaccaggagagagcgag
agcgctgatcacactgctgcggcgtcttactctgcccagtttgcagcgatcgtcaaggaa
ggaggctattctccagagcagccggtcccagacagcgaggataccgccacagaccagacc
caccacattattgtcccaagctatgctgcttggtttgattacaatgccattcatgctatt
gagaagagaggacttcctgaattttttaatggcaagaacaagtcaaaaacacctgaaata
tacctggcatacagaaatttcatgattgatacttacagattaaacccaactgaatattta
acatccactgcatgtcgtcgcaaccttgctggagatgtatgtgcggtgatgcgtgtgcac
gcatttcttgaacagtgggggctgattaactaccaggttgatgccgatgccagacctaca
ccaatggggcctccacccacttctcacttccatgttttagcagacactccagctgggctt
cagtccatcaaccctcccaaggtaaatcagcctattgcagctaaacatatgatggatttt
gacaagaagcctatagataaaaagccagatttcagtattggcactgactttggattgaag
cttgaccagtattccaagaaaacaggagctctcaaaaacaaatcggcagccagtcaagct
cgtgaatggacagagcaagaaactctacttcttctggaagctcttgaaatgtacaaagat
gactggaacaaagtatgtgaacatgtaggaaccagaacacaggatgaatgtatccttcaa
ttccttcgtcttcccattgaggacccatatttggaagattctgaagttggttcgggagca
acaccaaatgcactaggacctttggcatatcagcctattcctttcagtaaatcaggcaac
ccaattatgtccactgttgcctttctagcttcagtagttgatcctcgaattgcagcttca
gctgcaaaagcagccatggatgaattttgcagaattaaagatgaagttcctgcggccctt
ctcgattctcatattaagaatgttgctgatcatgcagccactaatgagggcaaagtggat
ccaactgctggtttgggtaaatcaggtattgctggaactgagccagagggagaggaaaag
aaggaaggtgaaccagagacagaaaagaaagatgatgccaaaaaggattctgagaagaaa
gaagaagaaaagaaggatgaaggtgagaaagaaaagaaagacgagtcaatggaagttgat
aaatcagatgagaaaaaaacagaggagaaaaaagagggtgaagaagaagacaagaaggat
gaaaagggggaaaccaaagacgagaggaaagaagagatcagccctgaagaaaagaaatta
gatgcagagcgtgagaggttacgtaaggatgcttctgtccagcaagcagccagtgctgct
ttgggatcagctgctgtaaaagcaaaacatctagctgcagtagaagaaagaaaaataaaa
tctttggttgcacttctggttgagacgcaaatgaagaagcttgaaatcaaactccgccac
tttgaagaactcgagaccataatggatagggaacgagagagcttggagctgcagcgtcag
caattattacaggaacgtcaacagtttcatctggaacagttgaaagctgcagagatgcga
gcacgtcagcatgccttacatcagctgacgcaaggggcaagtccagctcattccccagcg
ccttccatggcacaggttcaccagtag
DBGET
integrated database retrieval system
