Procambarus clarkii (red swamp crayfish): 123768987
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Entry
123768987 CDS
T07930
Name
(RefSeq) uncharacterized protein isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04080
Neuroactive ligand-receptor interaction
pcla04082
Neuroactive ligand signaling
pcla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123768987
04082 Neuroactive ligand signaling
123768987
04519 Cadherin signaling
123768987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcla04040
]
123768987
Ion channels [BR:
pcla04040
]
Ligand-gated channels
GABA-A
123768987
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Ldl_recept_a
Lectin_C
Laminin_G_3
Pentaxin
Neur_chan_memb
DUF8320
LDLRAD1_C
Motif
Other DBs
NCBI-GeneID:
123768987
NCBI-ProteinID:
XP_045615865
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All DBs
Position
64:9873254..9887531
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AA seq
939 aa
AA seq
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MAYIYGEELAKLDTLNFTPVLNVTIFTKYLLTQGTNRPQDQHQPTNPKIAVTMPHKSLAE
FLQINNIETTWILILGVSVLVARCECLRVLTLQEDGVMSDSTWARSTRISPRTPSTSACI
RFKVFFFRPLTHVFSVASREETREMNGEIFVDYVRPIVSAAFYFLGISEPLQVLTWYHYC
LTYNHSVAQIAAYLDGQLQGIISRNTTRWFSEATMVLGQYSINYLSGYTKTRSFSGQVTQ
AGVWGRTLAPAEVSQLASCGSDPPGLAIPWNHEWILNNASFIEVPEYEVCEKKSKSSYIK
FLPMPFENARKFCAGLGGYMPVPQSLDHAKELLRIMFDPPVIKLIWLGATDELQEGVYIN
THTGEEQKWFKWGSNDPNGLKWQNCLALDSDYLHDYPCHITMEAMCFLESQREWTLKGPC
EEDKANYKYSLLHPAQGKVVFRGYYQYEIVEEDESWTWRNVIANKVVARLPFREARWPMG
RRNWTVVDEVCDNNGTQLLQLSSCTNHDFTCKDGSCVPRFQRCDRRPDCLDGSDEQECRL
VDRPLGYHHSLPPPNRIAGTPLPVGLKLKLVSLSLSDKDSYLDVTYHLNLTWWDLRIRFQ
NLKNASRLNQVPVTEYDSLWTPTLTLVNVRGTERTLVDNEAILTIHRQGHPLPDDLSIPE
DVDVYLGMENQLSVERKYTSQFLCDLNLHLYPFDEQRCFLNLEVLSAATDFLVLDTNSSS
VSYVGAELLIEYTVVSVSLRLDNNETLAKAEVDVVLQRRVGYPIISIYVPTVILLILAYL
SLIFRRDDFETRVASALTVLLVLASLFTQTSTSLPKTSYFKMVDVWLLFSISLIFFVIIY
HVVIDLALEGKLVGSSSKPPSPVKVVPLGVHADKREKLRKTASSSSHSPASLPGWLHSEG
GTAQQRNKKLSEKLSTQALVFIPCYFTAFNFVYWMYILT
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcatatatatatggcgaggagctcgctaaactcgacactctgaattttactcctgtc
ttgaacgttactatctttactaagtatttactaacacaggggactaataggcctcaagac
caacatcaacctacaaaccctaaaatcgcagtaactatgccacacaaatcgcttgctgaa
tttcttcaaataaataacatagagacgacttggattcttattttaggtgtgagtgtattg
gtggcgaggtgtgagtgtctgagggtcttgacgctgcaggaggacggcgttatgagtgac
tccacatgggctcggagtacacggatttcccctcgaacaccctccacctccgcctgcatt
aggttcaaggtgttcttctttagacccctgacgcatgtcttctccgtcgcctcccgtgag
gagaccagggagatgaatggagagatcttcgtggactatgtgcgtcctatcgtgtcggcg
gcgttctacttcctgggtatctctgagcccctacaggtgctcacctggtaccactactgc
ctcacctacaaccactccgtcgcccagatagctgcctacctcgatggccagctccagggc
atcatctccaggaataccaccaggtggttctcagaggctacaatggtacttggccagtac
agcatcaactacctcagcgggtacacaaagactcgaagcttcagcggacaagttacacag
gctggtgtatgggggcgaaccttggcaccagcagaggtgtctcagcttgcatcttgtggg
tccgatcccccaggactcgccatcccctggaatcacgagtggatcctcaataacgcctcc
ttcatcgaggtccccgagtatgaggtttgcgagaagaagagcaaatcatcatatattaaa
ttccttcccatgccattcgaaaacgctcgtaagttttgtgctggtcttgggggttatatg
cctgttcctcagtctctcgaccacgccaaagagctgctgcgaatcatgtttgatccgcct
gtgatcaaactcatctggctgggggccacggatgagcttcaggagggcgtctacataaac
acacacactggagaggaacaaaagtggtttaagtggggtagcaacgatcccaatgggctt
aagtggcaaaactgtctcgcccttgattcggattatctacacgactatccttgccatatt
accatggaagccatgtgttttctcgagtcccagagggaatggacgctcaaaggcccctgc
gaagaggacaaggccaactacaagtatagtctgctgcatccggcgcaaggtaaggtggtg
tttcggggttactaccaatacgaaatcgtagaggaggatgaatcttggacctggagaaac
gtaattgccaacaaagtcgtggctcgattacctttccgcgaggcacgctggcccatgggg
aggagaaactggacggtggttgacgaagtctgtgataataatggaacgcaactccttcag
ctaagctcgtgcacaaatcacgatttcacgtgtaaggacggctcgtgtgtgccccgcttc
cagcgctgcgaccgtcgtccagattgtctggacggaagcgacgagcaggagtgtcgcctg
gttgatcgaccactcggctaccaccacagtcttccacctccaaacagaattgctggaact
cccttgcctgtgggccttaaacttaagttggtgagcctctccttaagtgacaaggacagt
tacctggatgtcacctaccacctgaacctcacctggtgggacctacgtattcgtttccag
aatctcaagaatgcttcacgtctcaatcaggttcccgtgacggagtacgacagcctgtgg
actccaacgctcactctggtcaacgtgagggggacggaaaggacgctggtggacaatgag
gccatcctcactatccaccgccagggacaccctctgcctgacgacctgtctatcccggaa
gatgtcgacgtatacctggggatggagaaccagctgagcgtggagcggaagtacacttcg
cagttcctgtgtgacctcaacctccacctgtaccccttcgacgagcaacgctgcttcttg
aacctcgaagtcctctcggctgccacggacttcttggtgctggatacgaactcgtcttca
gtctcctacgtcggtgctgagctgctgattgagtacacggttgtgagtgtatcacttcga
cttgacaacaacgagacactggctaaagcggaggtagatgtggtactgcagcgtcgagtg
ggatatcctatcatctccatctatgtccctacagtcatcctcctcatcctggcctacctc
tccctaatcttcaggagggacgacttcgagacgagggtggcctcagcgttgaccgtactt
ctggttctcgcttctctcttcactcagacatcaacatcacttcccaagacttcctacttc
aagatggtggacgtgtggttgctgttcagcatctccctcatcttcttcgttatcatctac
cacgtcgtaatcgacttggctctcgaagggaagctcgtcggctcctcctccaagccccct
tccccggtgaaagtcgttccacttggcgtgcatgcagataaacgagagaagctacgcaag
acagcatcttcctcaagtcattcccctgcttctctacccggctggttacactccgaaggc
ggaacggcgcagcagagaaataagaagctctctgagaagctgtccacacaggcgctggtc
ttcatcccatgctactttaccgccttcaatttcgtctactggatgtatattttgacttga
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