Procambarus clarkii (red swamp crayfish): 123769091
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Entry
123769091 CDS
T07930
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123769091
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123769091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123769091
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123769091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
123769091
NCBI-ProteinID:
XP_045616002
LinkDB
All DBs
Position
86:complement(4133653..4203732)
Genome browser
AA seq
1477 aa
AA seq
DB search
MASDGPGKYRERKNRAAKPYDRPKGIIRRVTDSVTGLFSASWLSGWMGGEDDDESSDQQA
GSSQTSTVAPAGESFIFAQPITARRPFRPIYPEEGETEGNGQQSLGVNEGASTSSGVRMG
VSGTSSVGISATTSRSIQLSGDSPSPSLTGRRHPIISSTPAPMFVSRTKSQLESRSLPLL
TSSTPTGDDGSEVSESSVDTGIDASVIPRPDEREYQREILQLDDESLQTLRDSLTKSVPS
APVGQSSGALPSLEETRKRPRDFEPDHTSVRAEGSISSKSLFSESSDVILGQPQPSGVAS
KRPRFNASLYGSICLGEKSVLSDSSFKSSPFYPGKTMYGGASAYRRSRLQPRTPSQTPRV
QIRAKTPSESSNDGGLSQAARRILESLEQMSTPISDAKRIPTPTPGQRGSFLDANPSYTA
AFHRHRPVLRTSAPPTSRLLTPTKLTVQENLTTCLLPSSSASTSLSSGSPGPKKNANSEG
APRVISDTSISEKGQEKNPPKDSLETFSAFSKASAEAAVKFKPVEPSVSSITAADEPSDV
LKFGASSNISMSLNTFEFTPRSNTTMSSFTSDLPQLAKKVGGKMKSRVADSGRSSKRHND
DDVIVEVPRLPAVSLTMTTLPTINLPIHAPSTQGSHVKINSSPKGFTFSTPEIVDTHSDV
ETLANAPKFTFRNPALIGEVNSSVDDLGTIAVPTVPMMFNSSSPSLGPKLKANNKNAVIP
LAGKLREGSILDILKSKGNSPDKLSSISLPSNSFEEKVENSKTENSYLNYKTKLPYEEDR
VTKTPQGFKGFGSAFKKSGDEWECSVCMIRNKNSDAKCVACQSQRPEQSIGVGTTEVTTR
AASVVEKCSSSLPGGVAGWGDAFKKSGNKWECDMCMLHNTDSAVKCVACEAPKPGSTTVC
EISGELNKVDKEDKLNSGFGSAFAKGKDEWECDTCLVRNKSEAVQCISCETPKPGAASVC
QAITGNFRFGLNSNDLSSTSSTFKFGLSNSQTQVKSSGFNFGVSAKSTEDSDSKGNSGFK
FGVPVEKPNALTGFSFSSNSENVHSKEKSQCASGGFKFGVQSLNSKDSESINKEPSLSFG
KSPESSSEPVTAANKTQVAFSFGSGTSLNTTAKENQSKVVSNEVNPATEPTSGNSHDQHI
EVKDSKSSEMFSFKSKSDNVDGISKTAFTFNDVIPGHGKDSVANVTKTATPISFGASKIT
NAGSESCALSFGAKVVESAIPAGGVFTFGDKGAKPFAFASPAGNKEESKSSPSFNFNAKW
DSIDTSEPAKKMTFSAANTGGINNGVSSSSSSLFAFGNKENKLSAGSGFGAVPSATPAFG
APAPASNPTPNFQFGNSNPPPPAATAPAPAFGNPAQAFGSATPTFGTNSINNSSTTSFAF
GQPAEKKPSAGFDFGQAASNTGSSFNFASGGAQSSNIFQFGQSQANSTPSSGLFAFGAAN
SEVPAPAPSFGNSENPFTSPAPPSGRVVKKAVRRNRK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgatggccccggcaagtacagggagaggaagaacagggcggccaagccctat
gatcggcccaagggtattatccgacgcgtaacagattctgtcactggtctgttttcggca
tcgtggctttctggttggatgggtggtgaagatgatgatgagagtagtgatcaacaagct
ggatcttcacaaacatcaactgtggcaccagcgggagaatcttttatttttgcccagcca
atcacagctcgtcggccatttagacctatatatcctgaggaaggtgaaacagagggtaac
ggtcaacagtctctaggtgttaatgaaggagcaagtacaagtagcggagtaagaatgggt
gtgtcaggaacctcatcagttggtatttcagcaacaacctccaggtcaatacagctaagt
ggagacagtcccagtccatcactaacgggacgaagacatccaatcatatcttctacgcct
gccccaatgttcgtgtctcgcacaaagagtcagctggagtcccgttctttacctctactc
acctcctcgacaccaactggagatgatggcagtgaggtgagtgagtcatcagtagataca
ggtattgacgcatctgtaattccacgaccagatgagagagaatatcagcgtgaaatcctc
cagcttgatgatgaatcgcttcaaactttacgagactccttaaccaaatcggtgccatcg
gcgcctgttgggcagtcgtcaggtgctctaccatctctagaagaaactcggaaaagacca
cgggactttgagccagatcatacgagtgttcgtgctgaaggcagtattagcagtaaatcc
ctttttagcgagtcctcggatgttattcttggacaaccacaaccttcaggagttgcaagc
aaaagacctcgctttaatgcatctttatatggctcaatttgtctgggagaaaaatccgtt
ttaagtgattcatcattcaagtcgtcgcctttctacccgggtaaaacaatgtatggcgga
gcatcagcatataggagaagtagactacaaccccggaccccaagtcagactccacgtgtc
cagataagagccaaaacaccatctgaatcttcaaatgatggtggtctcagtcaagctgct
cggcgcatcttggaaagtttggagcaaatgtcaacacccatatctgatgccaagcgtata
cctacccctacccctggtcagagaggcagcttcttggatgcaaacccttcatacacagct
gcatttcatagacatcgtccagttttaagaacatcggctccaccaacatctagacttcta
actccaacaaagttgactgtccaagagaatttaaccacctgtcttctgccctcaagttca
gcaagtacttctctttcttctggatctcctggtcctaagaaaaatgcaaattcagaaggg
gccccacgggtcatttcagatactagtatatcagaaaagggacaagagaagaacccacca
aaggattccttggaaacattttcggccttttccaaagcttcggcagaggccgctgtaaaa
ttcaagcccgtagagccctccgtatcctcaataactgcagctgatgagccatcagatgtg
ttaaagtttggagcctctagcaacattagtatgagtctaaacacatttgagtttactcct
agatctaatacaactatgtcatcatttacaagtgacttgccacagttagctaagaaagtt
ggtggcaagatgaagtcaagagttgcagatagtggaagaagttccaaaaggcataatgat
gatgatgtcattgtggaagtacctcgtctcccagctgtctctcttacaatgactactctc
ccaacaattaatctgccaatccatgcaccatccacgcaaggctcacacgtgaagataaac
tcttcaccaaaaggtttcacattctcaactcctgaaatagttgatactcactctgatgtt
gaaacacttgcaaatgcccccaaatttacattcagaaatcctgcactgattggggaggtt
aattcatctgttgatgatcttggtaccatagctgtgccaactgtaccaatgatgtttaat
agcagtagcccaagtttggggccaaaactaaaggcaaacaacaagaatgctgtaataccg
ttagctggaaaacttagagaaggaagcatattagatattcttaaatcaaagggaaatagt
ccagataaactatcctctatatctttaccatctaacagctttgaagaaaaggtagaaaat
tcaaaaactgaaaatagttatttaaattataaaacaaaattaccttatgaggaagatagg
gtaactaaaacaccacaagggtttaagggctttggttctgcctttaagaaatctggtgat
gaatgggagtgtagtgtgtgtatgattaggaataagaattcagatgcgaagtgtgtagca
tgtcagagccaaagacctgaacagagtattggtgttggcactacagaggtgaccactcgt
gcagctagtgtagtggagaagtgttcttcgtcattaccagggggtgtggcagggtggggg
gatgctttcaaaaagtctggtaataagtgggagtgtgatatgtgcatgttacataataca
gactcggcggtgaagtgtgttgcatgtgaagctccgaagcctggaagtacaactgtgtgt
gaaatttcgggtgaacttaataaagtagataaggaagacaaactaaattcagggtttggc
tctgcatttgccaaaggcaaagatgagtgggagtgtgacacgtgtttagttagaaacaaa
agtgaagccgtacagtgcatatcatgtgaaactcctaagcctggtgctgctagtgtgtgt
caagccataactggaaacttcagatttggtcttaattcaaatgacttatcttccacaagt
tctacttttaagtttggtttaagtaactctcaaactcaagttaagtcaagtggatttaat
tttggagttagtgccaaaagtacagaagacagtgacagtaaagggaattcagggtttaag
tttggagtgcctgtagagaagcctaatgcattgactggattttcttttagctctaattct
gaaaatgtacattctaaagaaaaaagtcagtgtgctagtggtggttttaaatttggtgtt
cagtcattgaattctaaagatagtgaaagtattaataaagaacccagtttatcatttggt
aagtcacctgaaagtagttcagaacctgttactgctgccaataagacacaagttgccttt
agttttggatcaggaacttcattaaatactactgcaaaggaaaatcagagtaaagtagtt
tctaatgaagtaaatccagcaacggaacctacgtctggaaatagtcacgatcaacacatt
gaggtaaaagactccaaatcaagtgaaatgttttcatttaaatccaagtctgacaatgta
gatggtatcagcaagacagcattcacctttaatgatgtcatacctgggcatggaaaagat
agcgtggctaatgttacaaagactgctaccccaatctcatttggagcctctaaaattaca
aatgcaggttcagaatcttgtgctttatcctttggtgctaaggtggtggagagtgctatt
ccagctggaggggtgttcacgtttggagacaagggagcaaagcctttcgccttcgcttca
cctgcaggcaacaaagaggagtccaaatcatcaccttcatttaacttcaatgctaaatgg
gactccatagatacaagtgagcctgccaagaaaatgacctttagtgcagctaacactggg
ggaattaacaatggtgtcagttcatcgtcgtcatcactgtttgcctttggaaacaaggag
aacaagttgagtgcaggttcaggctttggggcagttccatcagccaccccagcatttgga
gcaccagctccagcatccaatccaactcctaattttcagtttggcaatagtaacccccct
cctccagcagcaacagcaccagcaccggcatttggaaaccctgcacaagcatttggtagt
gcaactccaacatttggtaccaacagtatcaacaacagttcaactacatcatttgccttt
ggccagccagctgagaagaagccgagtgcaggttttgattttggccaggctgctagcaat
acaggatccagctttaactttgcaagtgggggagcccagtcttcaaacattttccagttt
ggtcagagtcaagctaatagtactccatcaagtggattgttcgcatttggtgctgctaac
tcggaagtccctgctccagcaccttcttttggaaatagcgagaatccctttaccagccca
gctcctcctagtggacgtgttgtgaagaaagcagtcagacgtaaccggaaatag
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