KEGG   Procambarus clarkii (red swamp crayfish): 123769251
Entry
123769251         CDS       T07930                                 
Symbol
Lis-1
Name
(RefSeq) lissencephaly-1 homolog isoform X1
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla00565  Ether lipid metabolism
pcla01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    123769251 (Lis-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcla03036]
    123769251 (Lis-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcla04147]
    123769251 (Lis-1)
Chromosome and associated proteins [BR:pcla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123769251 (Lis-1)
Exosome [BR:pcla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123769251 (Lis-1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_IFT140_1st LisH_PAC1 Beta-prop_SPT8 LisH Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F PROPPIN Nucleoporin_N Beta-prop_RIG_1st Ge1_WD40 Beta-prop_WDR19_1st DUF2020
Other DBs
NCBI-GeneID: 123769251
NCBI-ProteinID: XP_045616270
LinkDB
Position
66:27269519..27289571
AA seq 455 aa
MAPNVSWSGGVCGNQNQSGVLYSVVYGSVRSVTHVLIGSTVKPTIMKMVLSQRQREELNK
AIADYLCSNGYMDALEAFKNEADMPGEIERKYAGLLEKKWCSVIRLQKKVMELEVKLNEA
EREYIAGAPTRDKRSPSEWIPRPPEKYSLTGHRAPVTRVIFHPMYSVMVSSSEDGTIKVW
DYETGDYEKTLKGHTDSIQDIAFDHSGKFLVSCSADMSIKLWDFSSYECVKTMHGHDHNV
SSVTFMPSGDYLLSSSRDKTIKMWEVATGYCVKTFTGHREWVRMVRVCNDGSLIASCSND
QTVRVWLTASKECKAELREHDHVVECIAWCEGNACAAVNDAVATDNRKPNYQGPFLISGS
RDKTIKVWDVGIGLCLFTLVGHDNWVRGLLVHPGGKYILSASDDKTVRVWDIKNKRCQKT
LDAHSHFCTSLDMHRSAPYVITGSVDQTIKVWECR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggccccgaatgtcagctggagcggcggtgtttgtggcaaccagaaccagtcaggagta
ctgtattcagtggtgtatggaagtgtaagaagtgttacccacgtgttgattggttccaca
gtaaaacctacgatcatgaaaatggttttgtcacagcgtcaaagagaggaactgaataaa
gccatagctgactatttatgcagcaatggctacatggatgcgttggaagccttcaagaat
gaggcagacatgccaggcgagattgaaagaaaatatgctgggcttcttgaaaaaaaatgg
tgctcagttattagacttcagaaaaaggtaatggaactagaagtaaagttaaatgaagct
gaaagggaatacattgccggtgctcccacgcgagacaaacgatcgccgtccgaatggatt
ccacgacccccagagaagtacagcctcacagggcacagggcaccagttacaagggtaatt
ttccacccgatgtattcagtgatggtgtcatcaagtgaagacggtactatcaaggtttgg
gattacgaaactggagattatgaaaagacattaaaaggtcacactgatagcattcaggac
atagcatttgaccatagtggcaagttcctagtctcatgtagtgctgatatgtcaatcaaa
ctgtgggacttttcatcatacgagtgtgtcaagacgatgcacggccacgaccacaatgtg
tcctcggtcactttcatgccctcgggagattatctcttgagttcctccagagataagacc
attaaaatgtgggaggtggctacaggatattgtgtcaagacatttactggacaccgggag
tgggtgaggatggtacgagtgtgcaatgatggctctctcattgcatcgtgctccaacgac
cagacagtacgtgtgtggctcacagctagtaaggaatgtaaggctgaactgcgagagcac
gaccatgtagtagagtgcattgcgtggtgtgagggcaatgcctgtgcggctgtgaatgat
gcagttgcgacagataaccgcaagcccaactaccagggtcccttcctgatatctggatca
cgagacaagactatcaaggtatgggatgtaggcattggtctgtgcctcttcacacttgta
ggacatgacaactgggtccgaggcctgttagtacaccctggtggcaaatacatcctttct
gcctctgatgacaaaacagttcgtgtttgggatattaagaataagcgatgccaaaagact
ctcgatgctcactctcatttctgtacttcattagatatgcaccggagtgcgccatacgta
atcactggcagtgtggatcaaaccattaaggtgtgggagtgtcgctaa

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