Procambarus clarkii (red swamp crayfish): 123769725
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Entry
123769725 CDS
T07930
Symbol
Hel89B
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123769725 (Hel89B)
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123769725 (Hel89B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
TPR_Trm732_C
HEAT_EF3_N
TOR1L1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
123769725
NCBI-ProteinID:
XP_045616899
LinkDB
All DBs
Position
45:complement(19203543..19486488)
Genome browser
AA seq
2041 aa
AA seq
DB search
MVNFRLDRLFLLLENGGSGVTRQAAAQQLGEVVRLHPYELNSLLNRVHTYLSSKSWDVRI
AAGLAVEAIVRNVPQWNPQPLQGEREFQEEDYTKPRLSLGAFNLAHVLQKGSYLMAADEK
LFEAEDENMPLNPADRLACQRRLVNQRLGLDIAEAMGINTESIFTNEDLAESQVEEMTPV
NGQGKDSVMSIVKREMKSAGLVLSSRELNRARRKAKLLAKQKSVDVSECTTDEGPEKKRV
RMASVVSMEQAGSDDDERMVVDEGPVGLNICDEGCEWPLENLCDTLATDLFCLAWETRHG
AATALRQIIRVHGEGGGKTTCQTKEQMEQSHQAWLEDMAVRLMCVLALDRFGDFVSDQVV
APVRETCAQALGSILVLLKEDGVYSALALLETMLSWREWEARHGGLLGLKYLLAVRDDLR
ARLFTHTYPHIYRGLLDEMDDVVAVAASCLVPVADSVVELLDKQLVMKLVATLWDALLDI
DDLTSSTNSILMLLAKLLGHLGNSDSVTSNLSELVPRLWPFLYHSSSSVRGSALKTLDTL
TAFNSLQNVSTNTVPSLNVNNKMSGNEVLQKDKSEQSEQILNTNIDIKIEDNSEMLGETE
SLNSKVEVENIQQKVKIEKENISNANEDDNMKLDTGKCVKLGSTKNGDIGILSPVTKVRE
DSQTQSTITKKELKMETKSVNNLQSTLTVKEEISIKSEEISIKSEEISIKSEEIDLENPL
ESKCLSETVSESTPSTEAGAKTTGETSCFWLNSIIQPALSHVYQRALLEKSADNLNMVFK
IWQQMVGSVPLEALLPAVCPMVSSWLFLTMTNCKVPLDASLLLLAHHHKSGEGRRLRGTA
QSDPADRPEIKFYLGGCDQSSDALEKQEVTVRAVCAATKLLGCLSQYVIKPMPGVEYPPE
ETPDLCYVRLLIAHLSSRSAVQRLGAGAVVREWASICPEQECHPQLQSVLHTCLTEVVYY
DEIALSFTRLQQETRDFMAMLRHYKLPLDESFASAPVLTLEQIQNLSGHVALTLFSGGRL
RPKVHSTLEERRKAIQSSVSQTSTDQITLATTTQAIISGAVVRFKILPPKLNPVIKPLMD
SIKKEKNQQLQTLAAEDLSKLLELCVDRSTSPNGKVIKNLASFLCVDQEYTPKIKQQESD
KSGTSSTAGSKKGVLSLSSQLKNAERQLLRRSASVSGRGPGRPPGRPPANAKREDPAEVT
EAIIENENQQLAAIQRRGCTVALQCITNYFGKDLPQKIPQLWDLICNPFKSGVDSDPALE
MAQEAVNWLQLLEVVVPALHSHLVSQLESKLPLLEHWLYHPFCAVRHMASRVMGALACVL
TVPTMSHVVEKVVPCLGAIDDDSKRQGAVECIFAVIDCLGFNVVPYIVLLIVPLLGRMSD
QDCSVRLMATHCFATLIRLLPLEGGVPDPPSLSEELLQQKIREREFLEKLLDPTKIENYK
VPVPIYAELRAYQQNGVNWLAFLNRYKLHGILCDDMGLGKTLQSICILAGDHYTKEEERQ
KSGCKGTTFQSLVVCPPTLTGHWVYEVQKFVHRKYLNPLHYTGPPNDRYRLRFLFPRHNL
IVASYDIVRNDIDFFSKIKWNYVILDEGHIIKNGKTKSSKAIKQLVAHHRLILSGTPIQN
NVLELWSLFDFLMPGFLGTERQFMARYSKPILQSRDTKSSSKEQEAGVLAMEALHRQALP
FLLRRMKEDVLKDLPPKITQDYYCELSPLQEELYEDFARTQASQNISESLRSSENGQDEQ
APKKHGHIFQALQYLRKVCNHPKLVLKPRHPEYSRISAKLKNCNSTLSDISHSAKLPALK
QLLVDCGIGVGGGLAAEAVVSQHRALIFCQLKAMLDIIENDLLKAHLPTVTYLRLDGSVP
AGSRHALVQRFNSDPSIDLLLLTTQVGGLGLNLIGADTVIFVEHDWNPMRDLQAMDRAHR
IGQKRVVNVYRLITRGTLEEKIMGLQKFKVMTANTVISQENSSLLSMGTDQLLDLFTLDY
GKVDGSQDSVNASGRSSTSSQALGVGTTGAKAALENLPELWDQDQYENEYDLDSFIVSLK
K
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatttcagattagaccgattgttcttgctgttggaaaatggaggatcaggagtc
acccggcaggcggcagctcagcagctgggtgaagtcgtgcgtcttcatccatatgaactc
aattccctccttaatcgtgttcatacataccttagttcaaagtcatgggatgtcaggatt
gctgctgggcttgcagttgaggctattgtcaggaatgtgccacagtggaaccctcagcca
ttgcagggtgaacgggagttccaagaggaagattacactaaaccaagactatcgcttggc
gcatttaaccttgcacacgtacttcaaaagggctcgtacctcatggctgcagatgaaaaa
ctatttgaggcggaggatgaaaatatgcctcttaatcctgcagatagacttgcctgccag
cgtcggctagtgaaccagcggcttgggttggacattgctgaggcaatgggaataaacact
gagagtatatttacaaatgaagacctggctgagtctcaggttgaagaaatgactcctgtc
aatggccagggaaaggattctgttatgagcattgttaaaagggaaatgaaatctgctgga
ctggttttaagttcaagagagctgaatcgtgctagaagaaaagcgaagttattggctaaa
caaaaatctgtggatgtatctgaatgtacaactgatgaaggccctgagaagaagcgtgtc
cgtatggcaagtgtggtgagcatggaacaagccggtagtgatgatgatgaacgaatggtt
gtggatgaagggccagttggtcttaacatttgtgatgagggttgcgagtggcccttagag
aatttgtgtgatacccttgccacagatttgttttgtcttgcatgggagacccgtcatgga
gctgccacagcactcagacagattatcagagttcatggtgaaggtggtgggaagacaacg
tgccaaacaaaagaacagatggaacagagccatcaggcctggctagaggacatggctgtg
aggctcatgtgtgtgttagctctagatcgttttggtgactttgtatcggaccaagttgtg
gcacctgtcagagaaacatgtgcgcaagcgttaggaagtatactggtgttgctgaaagaa
gatggtgtttacagtgctctggccctgctggagaccatgttgtcatggagggagtgggaa
gctcggcacggaggattgctgggtctcaagtacctcttggctgttcgagacgacttgaga
gcgagactcttcactcatacttaccctcacatctatagaggtttactggacgagatggac
gatgtggtagctgtggctgcatcgtgccttgtaccagtggcagacagtgtggttgaattg
ctggataagcagttggtgatgaagctggtggccacactttgggatgccttgttagatatt
gatgacctgacatcatcaactaattctatattaatgctccttgccaagctgctgggacat
ctgggtaacagtgacagcgtaacgagcaaccttagtgaactggtaccccgtttgtggcca
tttttgtaccacagtagtagctctgtcagaggctcggctttgaagaccctggatacactt
acagcatttaatagtctacaaaatgtctcaactaatacagtgccttcacttaatgtaaat
aacaaaatgtctggaaatgaggtattgcaaaaggacaaatctgaacaatctgaacaaata
ttgaatacaaatattgatattaaaatcgaagataactctgaaatgttgggggaaactgaa
tcattaaactctaaagtagaagtagaaaatatacaacagaaagttaaaatagaaaaagaa
aatatatcgaatgcaaatgaagatgataacatgaaattagatacagggaagtgtgttaag
ttaggatccaccaaaaatggagacattggcatcttatcaccagttactaaagtgagggaa
gatagtcagacacaatcaacgatcacaaaaaaagaattgaagatggaaacaaaatctgtg
aacaatttgcaaagtactctcacagtaaaagaagaaatatccataaaatcagaagaaata
tccataaaatcagaagaaatatccataaaatcagaagaaattgatttagaaaatcctttg
gaaagtaaatgtttgagcgaaacggtgagcgagtcgacaccgtcaaccgaggccggagcc
aagacaactggtgaaacatcttgcttctggctgaactccatcatccagccagcgttgtca
catgtatatcagagagctctgttggaaaaatcggctgataaccttaacatggtattcaag
atttggcagcagatggtagggagtgtgcctcttgaagctctcctgccagcagtgtgcccc
atggtctccagctggctgtttctcaccatgaccaactgtaaagtgccactagatgcatca
ctgctgcttcttgctcatcatcataagtcaggtgagggacggagattgcgtggtactgct
caaagtgatccagcggatagaccagagataaagttttacttggggggctgcgaccagtcg
agtgatgcattggagaaacaagaagtcacagtcagggctgtgtgtgctgcaacaaaactt
cttggttgtctttcccagtatgtgattaagcccatgcctggtgttgagtatccacccgag
gaaacgccagatctgtgctacgttcgccttcttattgcccatctcagttcgcgatcggct
gtacaacgtcttggggctggggcagtagtccgagaatgggcatcaatatgtcccgagcaa
gaatgtcatccccagctgcaaagtgtgctgcatacttgccttacggaagtggtgtactat
gatgaaattgctttgtcatttacaagattacaacaagaaacgcgcgatttcatggcaatg
ctgagacactacaagttacccctggacgagtcctttgcctcggctcctgtccttacactg
gagcagattcagaatctgagtggacacgtagcactcactctgttctctggaggccgcctc
agacctaaggtccacagcacgctggaggagagacgcaaagccatccagagcagtgtctcc
caaacctccactgaccaaattactttggctacgacgactcaggcaataatctccggtgca
gttgtacgatttaaaattcttccgcctaagctcaaccctgttatcaagccactaatggat
agtattaagaaagaaaaaaatcaacagctacagactttggccgccgaggaccttagcaag
cttttagagctgtgtgttgatcggtcaacaagtccaaatggtaaagtgattaaaaatctc
gcatctttcctctgcgtcgatcaagagtacactcctaagatcaagcaacaggaaagtgat
aaatctggaaccagtagcacagctggcagcaaaaagggtgtactcagcttgtcttcacaa
ttaaagaatgctgagcgccagctgttgcgtcgtagtgcttcagtgagtggtcggggacct
ggcagacctccaggtcgtcctccagccaatgcaaagcgtgaggatcctgctgaggttact
gaagcaataatagaaaacgagaatcaacagttggctgcgattcagagacgggggtgtaca
gtcgcccttcaatgtattactaactattttgggaaagatttgccacagaagatacctcag
ttgtgggacctgatatgcaatcctttcaagagtggtgttgacagtgacccagcactagag
atggctcaggaggctgtcaactggctgcagctcttggaggtggttgtgccagctctccat
tcccatctggtctctcagcttgagagcaagcttcccttgcttgagcactggctataccac
ccattctgtgctgttcggcacatggccagcagagtgatgggagctctggcttgtgtcctt
actgtgcccaccatgtcccatgtggtggagaaagttgtaccttgcctcggagccattgat
gatgacagcaagagacaaggagcagtggagtgcatttttgctgttattgattgcctgggg
tttaatgttgtgccttacatagttcttcttattgtgcctttattaggtcgtatgagtgat
caagactgcagtgttcgtctcatggcgacacactgctttgcgacactgatccgactgctg
ccgctggaaggtggtgttcctgaccctcctagtctgagtgaagagttgttgcaacagaag
atcagagagagagagtttctggagaagcttcttgatcccacaaagattgaaaattataaa
gttcctgtgccaatttatgccgaattaagagcatatcagcagaatggcgttaactggttg
gcatttttgaatcggtacaagctccatggaatactttgtgatgacatgggtcttgggaaa
actcttcagtctatatgtatccttgctggagaccattacactaaagaggaagagcgtcaa
aagtctggatgtaaaggcaccaccttccagtcacttgtggtatgtccacctaccctaaca
ggccactgggtgtacgaggttcagaaatttgtgcatcgcaaatatttaaaccctcttcac
tacactggtcctcctaatgatagatacagactgcgattcttgtttccccgtcataatttg
atcgtggcttcttacgacattgtccgcaatgatatagacttcttttcaaaaattaagtgg
aattatgtcatattggatgaaggacacattatcaagaatgggaaaacaaagtcaagtaaa
gccatcaagcaacttgtagctcaccaccgtttgattctctctggtactcctattcaaaat
aatgttttagagctgtggtcgctctttgacttcctcatgccgggttttttgggcaccgag
cgtcagttcatggcacgttactccaagccaatcctgcagtctcgagataccaagagttcc
agcaaagagcaggaagctggtgttttggccatggaagccttgcatcgtcaagcacttcct
tttcttctccggcgaatgaaggaggacgtgttgaaggatctacctcccaagattacacag
gactattattgtgaattaagtccactgcaagaagagctgtacgaagactttgcccgtacc
caagccagtcaaaacattagtgaatcactacgaagttcagaaaatggacaggatgagcaa
gcaccaaagaaacacggtcatatattccaggcattgcagtaccttcggaaagtgtgcaac
cacccaaaactggtactcaagccccggcatcccgagtatagtcgtatctctgccaagctc
aagaattgtaattcaacactgtctgatatatcccactcagctaaactgccagcacttaaa
cagctgctggtggattgtggtattggtgtgggcggggggctggcagcagaggcagtggtt
tcccagcaccgagctctcatcttctgccagctgaaggctatgttggacattattgaaaat
gatttgctcaaggcacatcttccaactgtgacgtatttaagactggatggctcagtgcca
gctggatcaagacatgcacttgtccagaggttcaacagtgatccgtctatcgacctgctg
ctccttaccacgcaagttggtggtttggggctcaacctcattggagctgacacagtaatc
tttgtggagcatgactggaatccaatgagagacctgcaagctatggaccgggctcaccgc
attggtcagaagcgtgtggtcaacgtgtacagactgatcacaagaggaaccctggaagag
aaaattatggggctacaaaagtttaaggtgatgactgcaaacacagttattagccaagag
aattccagtctacttagcatgggaacagatcagcttctggatctcttcaccttggactat
ggtaaagttgatggtagtcaagactctgtgaacgccagtggtcgaagcagcacatcgtct
caggctcttggtgtgggcacgacaggagccaaagctgccctggagaatttgcctgaactc
tgggatcaagatcaatatgagaatgagtacgatcttgactcctttattgtgtctcttaaa
aaataa
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