Procambarus clarkii (red swamp crayfish): 123769793
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Entry
123769793 CDS
T07930
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123769793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123769793
Spliceosome [BR:
pcla03041
]
Complex A
Other components
Complex A specific factors
123769793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
SLU7_N
KH_12
DUF7573
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
123769793
NCBI-ProteinID:
XP_045617012
LinkDB
All DBs
Position
45:6399633..6423673
Genome browser
AA seq
737 aa
AA seq
DB search
MSGANSTPLGRMNPAIGAGKKSAPTGSSLLKPSYMSSSSSSGSSATAAAAAAAAAVSAQI
NHSQNPCKRESESSYEAEQEERKRRRKSRWQGDEKDKTFIPGMPTVLPSNMSKDQEEAYL
LQLQIEELSRRLRSNDLGISPNPEDRSPSPEPIYNNEGKRLNTREYRTRKKLEDDRHNCI
TRMMSINADYKPPADYKPPVVKVSDKVMIPQEEHPDINFVGLLIGPRGNTLKAMEKDTGA
KIIIRGKGSVKEGKVGRKDGGPMPGEDEPLHAYVTASNPESVKKAVDRIKEIIRQGVEVP
EGQNDLRRMQLRELALLNGTLRENDGPRCSNCGSNAHKSWQCPDKPNVTNNVVCTSCGGT
GHIAKDCRQRRGPGAPASVDRQKIDEEYMSLMAELGEGPPPPQNNDRNSNRPTSTPTTRS
LFERPQGAPRPLMGPPPRSEPQPSVNNQFNSSNQNQGGMNQQNSWNSNQMGGQGPRPLLG
NNSNGPPNLTQPPPVMPWQQQQQQQQQQQQQQQQQAQQQQGSNSFPGVPPPNLLQAPPPP
PPPAAQNGQQQQQQPSWMAQAPPGPPGGSQGPQGPGTHGGPHGGPHGGPTNGPHGGPHGG
PHGGPHGGPHGGPHGGPHGGPHGGPHGGPHGGPHGGPPHGPPPQMNHWQGPPPGSHHGPP
GMGCPPPGPVPPPRPVGPPPGWGWNGPPQPVGPPPPPPPGGPGGPGGPGGPGGPGPRGPG
GVDLGALLSAPPPPPPS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagcaaatagcacaccattaggaaggatgaacccggctattggtgctggcaag
aagtctgccccaactggctcatcactgctcaagccaagttatatgagctcctcctcctcc
agcggatcttcagccacggctgcggctgcggcggctgcggctgcggtctcagcacagatt
aaccacagtcagaatccctgcaagagggagagcgagtccagctatgaagcagaacaagaa
gaaaggaagcgacgtaggaagtcgaggtggcagggtgatgaaaaagacaagaccttcatc
cccggcatgccaactgtgctgcccagtaacatgtctaaagaccaggaggaagcgtatttg
ctgcagctgcagattgaagaattaagtcgacgtctccgctccaacgatctgggcatctct
cctaatcctgaagacaggtctccttcaccagaacccatctataataacgaggggaagagg
ctaaacacaagggaataccgcacacgtaagaagctggaggatgatcgccacaattgtatt
acgaggatgatgagcattaatgctgattataagccgcctgccgattacaaaccaccagtc
gtgaaagtgtcggacaaggtaatgattccccaagaagagcatccagacatcaactttgtt
ggccttttgattggtcctcgtggaaacacactcaaggcgatggagaaggacaccggggca
aaaataataattcgaggcaaaggatctgtaaaggagggcaaggttggacgcaaggatggt
gggccgatgccgggagaagacgaacctttgcatgcctacgttactgccagcaaccctgag
agtgtcaagaaggctgttgaccggataaaggaaattattcgacaaggcgttgaagtaccc
gaaggccaaaatgacttgaggagaatgcagctgagagagcttgctcttcttaatggtacg
ttacgtgagaatgatggaccaagatgctccaattgtgggtcaaatgctcataagtcatgg
cagtgcccagacaagccaaatgtgacaaacaatgtggtgtgtacaagctgtggtggcacc
ggtcacattgccaaagattgtcgacaacgacgtggccctggtgctcccgcatctgttgac
aggcagaaaattgatgaagaatacatgtctcttatggcagagctaggggaaggtccccca
ccgcctcaaaataatgatcggaacagtaatagaccgacatccactccaaccaccaggagt
ctttttgaacgtcctcagggggcacctcgtcctctaatgggtccaccacctcgctcggaa
ccacagccatctgtaaataatcagtttaacagtagtaatcagaaccagggaggaatgaat
cagcagaattcatggaattccaatcaaatgggagggcaaggtccacgtcctttgcttggc
aacaacagcaatggtcctcccaatctgactcagccaccaccagtaatgccgtggcagcag
cagcagcaacaacagcaacagcagcaacaacaacagcaacaacaggcacaacaacaacaa
ggttcaaacagttttccgggcgtgccacctccaaatttgctgcaggcaccaccgcctccg
ccaccacctgcagcacagaatggacagcagcagcagcagcagcctagttggatggctcag
gctccaccaggcccacctgggggttcacaaggcccccaaggtcctggaactcatggtgga
cctcacggtggacctcatggtggaccaaccaatggtccacatggtggtccacatggtggg
cctcatggtggacctcacggtggaccacatggtggaccacatggtgggcctcatggtggg
ccacatggtgggccacatggtgggcctcatggaggacctcatggagggccaccacatggt
ccccctccacaaatgaatcactggcaaggaccacctccaggttctcatcacgggcctccg
ggaatgggttgtcctccacctggaccagtaccaccaccacgccctgtaggaccaccccca
ggctggggttggaatggcccgccacaaccagttgggccaccaccaccaccaccacctggt
ggcccgggaggtccgggtggccctggaggtccgggaggacctgggcccaggggacctggt
ggtgtcgatctgggagcccttctctctgcaccaccgcctcccccaccatcttag
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