Procambarus clarkii (red swamp crayfish): 123769979
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Entry
123769979 CDS
T07930
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123769979
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123769979
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Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
Motif
Other DBs
NCBI-GeneID:
123769979
NCBI-ProteinID:
XP_045617466
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All DBs
Position
45:3560293..3580819
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AA seq
1221 aa
AA seq
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MGLIMDEYEQKINSGNVFLQSQAITKLHTKMVENNKDGTSLYESDEVKLLWQTVNKGDIT
EATLAVETLVALIKSGLLPMPAVLQNFLADVTCAKSPSALVQGITAILLMSQIEKDGQIQ
CPFTGPPTGPTHPFVTLIIKRVDLIPTVLEEVASILRHPEQRVRTSSIYHIRPLLLHTFC
LTEKTLGLARPLLSLIVSSHITHAELNIIPLLCRIAPLIKDSSRDHVERKVMVLTALAEI
AVGSSLTRLQSALLPCLVMAVPLAMKQGLGTRTLERYMNTIASRLGRGCDITICALAEIL
PQTCGQLQVNLLKLGATLLSYKDGNPLVGARLLPSLLQVLSAPCTSVPGLTTAAAALVSL
VQATPAQASSNTQLAGNEYWETLCCTFSSLVSYIPALEFSDRLVRDPKLASDWLTKLASS
INQISSFYHTIVTSVFLYQGSTTQSVQQATKVLEREVMKKKALSLEVFPMVLYRLGRETD
PTTRLTILYTLPSLAVNKLCVALVLKTLLALWSSGSLRPLVLRLVYDLWTVEPRTYSYLS
QLIHDKSINTNEIQIARAFVVSSVCKAKPSQHGEELLPLLSGFLNECRDEDGTAQTLIAL
DGIYDLCANQIIDLRTTWRVIAPKLVRDKRPGVTEKLCTLLGLVPVLHVASTEYDKFTTD
ALTILWNWVASHRSLPVVKAAYMALEKFKYDNYTLKMLPQYARHGHQLPASMAATPFEAA
RKPEDVLNYVPGLGWVKLIKGCPESHLEYVASFINSLVSREVAALPKGIYLTAVQEAKRR
GIKGSGGQPEPQSYSFFKDSSILKALVSFLLEFPKMMENCECEQVKQRLLRSSVLMLEAL
GQSLSRPYPALDWCFLEKVLTVAQSTCNYDWITRIRHSLFKIAGRQCNKSTSASALISKW
LVPAPSNGLTREDEIVLYQLLDHLGRGLPPTVLQPFLSYVFNQHLSDTVHMKALLEALKP
NLTADFIFDTNRNVLSNAIENLNEHIDPSNEVLYVSYKACVADLPQKHIERLTSPSLWWE
VTDERLYRAAVLRCHVAEKDPEELALPWLNDLVDSAASLPGDRSHLLRVMSNTLIVRCRV
KESSAWFLQLLGRLRDHLKKKPGDNLVAVHEQQQRVTFYLDLVVMGLLVWSDLWATNQME
VLAETPALRDRLLLPSLVTLSGQSEWKQTLNQLLNWLVSCHSLMGEHVNSRYHLSSPTLL
LATLNPNLTQIMWNKVIALLI
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaattatggacgagtacgaacaaaaaataaactctgggaatgtgttccttcag
agtcaggcaattacaaagttgcatacaaagatggtggagaataacaaagatgggacctcc
ttatatgagtcagatgaggtgaagttactatggcagacagtcaacaaaggggacataacg
gaggctaccctcgctgttgagacactggtagcacttatcaagtcaggactgcttcccatg
cctgccgttctacaaaatttcttggctgatgtcacctgtgcaaaatctccaagtgcactt
gttcaaggaataactgcaattttgttgatgtcacaaattgagaaagatggacaaatacag
tgccctttcaccggtccccccacaggaccaacccatccgtttgtgactctgattatcaaa
agagtagatttaattcccactgtgctagaggaagtggctagcatcttaagacatccagaa
caaagagtgaggacttctagtatttatcacatacgtccacttctgctgcacactttctgt
ttaacggagaagaccttgggacttgctcgccctctgctctcactcatcgttagctctcat
atcacccatgccgagcttaatattattccactcctgtgtcgtattgctcctctcattaag
gacagtagcagagaccatgtggagcggaaagtgatggtgttgactgccctggcagagata
gcagtggggagcagtttgaccagactacagtcggctcttctaccatgtctagtgatggca
gttcctcttgctatgaaacaaggactagggaccaggacattggagcgttacatgaatacc
atagcttctcgtctcggtcgtggttgtgacataactatctgtgctctagctgaaatactc
ccacagacgtgtggccaactgcaagtcaatttactaaaattgggtgcaaccctcctgtcg
tataaggatggaaatcctttagttggtgccaggcttttaccctctcttctccaagttctg
tccgcaccctgcacctcggtgcctggcctcactactgctgctgcggccttggtgtctctt
gtacaggcaacacctgcacaagcatcgtctaatacccagctggcaggcaatgagtattgg
gaaacactgtgttgtacattctccagtctggtctcgtacattcctgcccttgaattttct
gaccgcctagtacgagacccaaagctggcctctgactggttaacaaagctagcatcatca
atcaatcagatttcgagtttctaccacaccattgtaacatctgtgtttttgtaccaaggc
tccacaactcaatctgtacaacaggcaactaaggttctggaacgtgaagtgatgaagaaa
aaggcgttatctttagaggtattcccaatggtgttgtaccgtttaggtcgtgaaactgat
cccaccactcgcctcactattctctacaccctaccatctctggctgttaacaagctgtgt
gttgccctggtgctgaagacacttcttgctctctggtcatctgggtcgttgcgtccactg
gttttgcgtcttgtatatgacttgtggacagtggagccaagaacctattcatatctttct
cagctcatccacgacaagtccattaataccaatgagattcaaattgctcgtgcctttgtg
gtctctagtgtttgtaaagcaaagccttctcaacatggtgaggagcttttaccacttctc
tctggattcctaaatgaatgtagagatgaagatggaacagcacagactctcatagctctg
gatggtatctatgatttgtgtgccaatcagataatagatctacggacaacttggcgtgtt
attgcgccaaaattggtacgagataagaggcctggggtcacagagaaactctgcacacta
ttagggcttgtgccagtgctccatgtggccagtacagaatatgataagttcactactgat
gctctgaccatcttgtggaactgggttgcatctcaccgatcacttccagtagtgaaagct
gcatacatggcacttgaaaagtttaagtatgataattacacactaaagatgcttccacag
tatgcaagacatggtcaccaattaccggccagtatggcagccacaccatttgaggctgct
cgcaaacctgaagatgtattgaattatgttcctggtctaggctgggttaagttaataaag
ggctgtcctgaatctcatcttgaatacgttgcgagctttataaattctttagtatcacgg
gaagttgccgcccttccgaaaggcatatacttaactgctgttcaagaagctaagcgcagg
gggattaaaggcagtggcggccaacctgagccgcagtcctacagttttttcaaagactca
tcaattctgaaggctctggtaagttttcttctggaattccccaaaatgatggagaactgt
gaatgtgagcaggtgaagcagaggttacttaggagctccgtattgatgcttgaggcactc
ggtcaatctctctctcgaccatatcctgccttggactggtgttttcttgagaaggttttg
acagtagcacagtcaacctgtaactatgactggattacaagaatacgtcatagtcttttc
aagattgcaggtcgtcagtgtaacaagtcgacctcggcaagtgctctaatcagtaaatgg
ttagttcctgcaccatctaatggtttaacacgagaggatgaaattgtcctatatcaattg
ttggatcatcttggtcgtggattaccccctactgtcttacagccattcttgtcctatgtt
ttcaatcaacatttatcagacactgtgcatatgaaggcacttcttgaggcattaaaacca
aaccttactgctgactttatttttgacaccaataggaatgttctaagtaatgcaatagag
aatctaaatgaacatattgatccatcaaatgaggtcttgtatgtatcatataaggcatgt
gtagcagatcttcctcagaagcacatagaacggctaacttcaccatcactttggtgggaa
gttacagacgaacgactataccgcgctgcagttttacgctgtcatgttgccgagaaggac
cctgaggaattggctctgccttggttgaatgatctggttgactcggctgcctctctaccc
ggtgaccgttcacatctgcttcgagtaatgtccaacacacttatagtccgatgtcgagtg
aaggaaagtagtgcatggttcttgcaacttctgggaaggttgcgagatcatctgaagaag
aaacctggagacaaccttgtggctgttcatgaacagcagcagagagtcaccttctatctg
gatctagtagtgatgggacttttggtctggtcagacctgtgggccacaaaccagatggaa
gtccttgccgagacacctgctctgcgagatcgtctactacttccttctctcgtaacctta
tctggacagtctgaatggaaacaaactctgaaccagcttcttaattggctggtatcttgc
cactctctgatgggcgagcacgtcaattcccgttaccatctatcctcgccaactcttctt
cttgctactctcaacccaaatcttactcagattatgtggaataaagttattgccttgctt
atttaa
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