Procambarus clarkii (red swamp crayfish): 123770040
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Entry
123770040 CDS
T07930
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123770040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123770040
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123770040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_RBM22
ECM11
zf-CCCH_2
DUF684
Motif
Other DBs
NCBI-GeneID:
123770040
NCBI-ProteinID:
XP_045617594
LinkDB
All DBs
Position
45:9508840..9526136
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AA seq
569 aa
AA seq
DB search
MFSQNPAVGNKVICSYYLKGTCKYGTRCWNIHPQTQGGAGMANTYATGATGTGGNVFGAK
TTNQQESKEFQDFVKQMSGEMNQWERSGQWLVSCFAPLKARLPLSGFSDHSPEEFRLKAY
EALKTNTSSSYQAHWTEMQQMYKLLRDALKMPTQEAVQAMRDVYNSKSALEQQEQQQQQP
VKQTSLFGKPPGQTVFGVTSQPGSGTGLLGAKPQPSIFGGSSTVFGGNQPTTTSVFGGGA
TKSVFGGQPTLGVQNTSPFVNQTPSIFGGASNNVFKSSQNSTSTGLFGSSSQSQTSTGPI
FGGSSTSTAVGQTTSIFGGGQNQSTGSSIFNSNTQNQPSIFGGTTANAQSSVFQGAQGTA
QTAASHAGGGQGIFGSQQQQQQGLFGVQPVQQQQQQQQQPASVFGRQSIFGGSQATPLSG
DSVQNTSPFTFGGSTPGSVFGGSAPKGTGSIFGGNTASGRGNGIFGNVQTTGPFGKPSLP
FGNTSEASTNSGLFGKPAEGAQPATGQGTPGLFGRPAEGTQNRMHSAISNDHADWYTSLD
QLKPEDRAQFEAEAFTAVPFCPPPQELCV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcaaaacccagctgtcggtaataaggtgatctgcagttattacctgaagggc
acctgtaaatatggaacaagatgttggaatattcatccacaaactcaaggtggtgcaggg
atggcaaatacgtatgcaacaggtgccacaggcactggtggcaatgtgtttggtgccaag
accaccaatcagcaagaatcaaaagaatttcaagactttgtaaaacaaatgagtggcgag
atgaatcaatgggaacgtagtggtcagtggctggtgtcgtgctttgctcccctgaaagct
cgccttcctctctcgggcttctccgatcattcgcctgaagaatttagactaaaagcatat
gaagcactgaagacaaatacatcaagtagttatcaagctcattggactgagatgcaacag
atgtacaagctgctgcgagatgcacttaagatgccaactcaagaagctgtgcaggcaatg
agagacgtgtacaattccaagagtgctctagagcaacaagagcaacagcagcagcagcca
gtaaagcaaaccagtttatttggtaaaccacctggacagaccgtgtttggggtaacttct
caaccaggtagtggaacaggtcttctaggagcaaaaccacaaccctcaatctttggagga
tcctctacagtatttggaggaaatcagcccacaactacatcagtatttggtggaggagcg
accaagtctgtctttggagggcaaccgacacttggagtgcagaatactagtcccttcgta
aatcaaaccccaagtatatttggaggggccagcaataatgtgttcaagagttctcaaaat
tcaacaagtactggattatttggttcttcatcacagagtcaaacaagtacagggcctata
tttggaggtagttctacctcaactgcagttggtcagactactagcatctttggaggtgga
cagaatcagagtacaggaagtagtatatttaatagcaacactcagaatcagccttcaata
tttggaggaacaacagctaatgcacaaagcagtgtctttcagggagcacagggaacagcc
caaactgcagcatcacatgcaggcggaggacaaggtatttttggaagccaacagcagcag
cagcagggattatttggtgtgcagccagtacaacaacagcaacaacagcaacagcagcct
gcttcggtgtttggtagacagagcatctttgggggcagtcaggccactccattatcaggt
gattcagtacaaaatacatcaccattcacctttggtggtagtactcctggatctgtattt
ggaggtagtgctccaaaaggcacagggagtatatttggaggaaatacagcatctggcaga
ggaaatggtatctttggtaatgtacagacaactgggccatttggcaagccttctcttcca
tttggaaatacgagtgaagcaagtactaattccggattatttggaaaaccagctgaaggt
gcacaacctgcaacaggtcagggaactcctgggttgtttggaagacccgcagaaggcact
caaaatcgtatgcactctgcaatttcaaacgaccatgcagactggtacacatctttagac
caattaaaaccggaagatagagcccagtttgaagcagaagcatttactgctgtaccgttt
tgtcccccgcctcaggaattgtgtgtgtga
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