Procambarus clarkii (red swamp crayfish): 123770272
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Entry
123770272 CDS
T07930
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123770272
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123770272
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_22
Cornifin
ATPase_2
AAA_14
Motif
Other DBs
NCBI-GeneID:
123770272
NCBI-ProteinID:
XP_045617926
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All DBs
Position
42:complement(18837..47164)
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AA seq
1111 aa
AA seq
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MSFVPRHQARTPRYDVYDEVQDASTDTYSGLGAGCEGSYATRVVNDDEDASTPSNSAPMH
STPVGTDIPPLLAQGVSTVATDTSDSRQTPHSATVSSRPAAPVHKASSTESSSNRILGEF
SLINDVSKMAGIQDASLFSKSGSWTSSTSLSSRLYHQPHVPHYMTTTTNSAPCTRGIKAR
TPASNVGNKTPGSGRLKTPGSGRLKTPGSAPSRTSGSGRSKTPGSGMSRTPGSAASRTPR
SAQELSPSTIVAVVEGRGQARGEVGVAAIDLRSPQLSLAQFSDTHTYTRTLTKLTILNPL
EVIVATTAVQLDARGGGGGSGGLLRVVQDCVPSASVTAVHRRYFNDTRGLAIVKHLAAPH
CAYIERHVATKYYCLAAVAAVMKYVEHIQHVTYAPHSLLVSLSSSENTMTIEYSSCRKLE
LVRSLRGGWEESLFGALRHTRTPAGTRLLRASLLQPHADAATITTRLDTLQYLVEHSDLF
YTLQSILGRFPDVDWLLSMCVQVPKEETEQRCELRLNYVIALKNTLELLDPLANALVGVT
DPLLLSVREAVRSTVLRELLEVLRQVLHEDARLVKGAAAMRTQRCYAIRSHVNGLLDVAR
KIYSEIIDDITEHVESTGREHGVCARVGHNAARGFHITIPVAKRAAPPRLPSVFIQVMRG
RGYVSCTTEHLYQLDQRSRDTLREILIMSNVIVVEMLVEARGRMGALHGLGEAVATLDLV
VGLAHAAALASWVRPEFSHTLAIRTGRHPILDVLATLPPVPNNTFLSPENRVMVVTGPNM
SGKSTYLRQIALIQVLAQIGSFVPAEFASVRLVRQIYTHLGSEDSPENNASTFQVQMSDV
AHMLSGAGRESLVLLDELGSGTSVEEGAALAWAIMEALIHARATTVLATHALFLTRLANL
YPCVANYHLESEDGGSGRLQLTHVVRKGVTRATNYGLAMAAITPIPPTVLQRAHALALTM
TPPTQVAAEEESEWIRQRAVHRLAHRLLALAQATSSADSSLHTPGSGGNHEPEDRIPATR
DYSSAHITPLPHLAHVSHNGGNHAPVESNAESRDTNEESNVRDGEAFSGSDARDKELKVQ
LEALLEEFLAQAVQPESNLMSVDDSDVPTEP
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtcccacgccatcaggcaaggacgcctagatatgatgtgtatgatgaggtt
caggacgcctcgactgacacctactcaggacttggtgctgggtgtgaagggagttacgct
acaagagtcgttaatgatgatgaagacgccagcaccccgagtaatagtgctccgatgcac
tccacgcctgtgggtaccgacatcccgcctcttctcgcccagggggtgtccacggtggcc
accgacacctctgatagccgtcagaccccacattctgcaacagtcagcagcaggccagca
gcccctgtgcacaaagcgtcatctactgaaagctctagcaataggatcctgggagaattt
agcctgattaatgatgttagtaagatggctgggatacaagacgcaagcctcttctccaag
tcgggcagttggacctcgagcaccagcttaagctccagattataccaccagcctcacgtc
ccacattatatgacaaccaccacaaattcagcgccctgcacaagaggaattaaggcaagg
acgcccgcttccaatgtcggcaacaaaactcctggttcaggtcgtctgaagacccctggt
tcaggtcgtctgaagacccctgggtctgcgccttcgaggacctctggatctggacgttcc
aaaacgcctggttcgggaatgagcaggacaccgggttcggcagccagtaggacgccccgc
tctgcccaggagctctcaccatcaactatcgtagcggtggtggaagggcgcgggcaggcc
agaggggaagtgggtgtggcagccatcgacctgcgcagtccacagctctctcttgcccag
ttctccgacacccacacttacacccgcaccctcaccaagctcaccatcctcaaccctctg
gaggtaatagtagcaacaactgcggtgcagctggatgccaggggcggcggtggaggcagc
gggggcctgctgcgggtggtgcaggactgtgttcccagcgcctccgtcaccgccgtccac
aggcgctacttcaacgacactcgaggcctggccatcgtcaagcacctggccgctccacac
tgcgcctacatagagagacatgtcgccaccaagtactactgtctggcggcggtggcagcg
gtgatgaagtacgtggagcacatccagcacgtcacctacgccccacacagcctcctcgtc
tccctctcctcctccgagaataccatgaccattgagtactcgtcgtgccgtaaactggag
ttggtgagaagtctgcgaggagggtgggaggagtccctcttcggcgccctcagacatacc
aggacccctgcgggcaccaggctcctcagggcttccctcctacagcctcacgccgacgcc
gccaccatcacgacccgcctcgataccttgcagtacctcgtcgagcactcagacctcttc
tacaccctgcagtcaatactggggcgcttccccgacgtggactggctgctctctatgtgt
gtgcaggtgccgaaagaggagaccgagcagcggtgcgagctccgcctcaactacgtcata
gccctgaagaacacactcgagttactggacccgctggccaacgccctcgttggcgtcacc
gatccactcctgctttccgtcagagaggcggtgaggagcacggtactgagggagctactg
gaggtgctacggcaggtactacacgaggacgcccgcctggtgaagggcgccgccgccatg
agaacccagcgctgttacgccatcaggagccatgttaacggcctactcgacgtcgctcgc
aagatctactctgagattatcgacgatatcacagagcacgtggagagcacgggtcgagag
catggcgtgtgtgcacgggtcggccataacgccgccaggggcttccatatcaccattcct
gtcgccaaacgggccgcccctcctcgtctcccaagcgtcttcatccaggtgatgcgcgga
cgagggtacgtctcttgtaccacggaacacctgtaccaattggaccagcgttccagagat
acgctcagggagatcctcatcatgagtaatgtgatcgtggtggagatgttagtggaggct
cggggtcgcatgggggcccttcacggcctgggggaggcggtggccaccctggacctcgtg
gtggggctggcgcacgctgcggcactcgcctcctgggttcggccggagttctcacacacc
ctggccatccgcactgggaggcaccccatcctcgacgtcctcgccacactgccgccagtg
ccaaacaacacgttcctgagccctgagaaccgggtgatggtggtgacgggacctaacatg
agcggtaaaagcacttaccttcgtcagatcgctctcatccaggtccttgcacagattggg
agcttcgtgccagcagagttcgcctcggtgcgtctggtgcgtcagatctacactcacctg
ggctcggaagactccccggaaaacaacgcctctaccttccaggtccagatgagcgacgtg
gcgcacatgctgagcggggcggggcgggagtccctggtgctgctggacgagctgggctcc
ggcaccagcgtggaggagggcgccgccctggcctgggccatcatggaggcgctcatacac
gcccgcgccaccaccgtcctggcaacccacgccctcttcctcaccaggctcgccaacctc
tacccctgtgtggccaactaccatctggagagtgaggatggcgggtcggggcgcctgcag
ctgacacacgtcgtccgcaagggcgtgactcgggccaccaactacggcctggctatggcc
gctatcacgcccatcccgccaacggtgctgcaacgtgcacacgccctcgctctcaccatg
acaccgcccacacaggtagcggcggaagaggagagcgagtggatccggcagcgagcagtg
catcgcttggctcaccgcttgctggctctggctcaggcgacgtcctcggcagacagttct
ctccacacgcctggctctgggggtaaccatgaacccgaggaccgtattcctgccactcga
gactactcttcggcccacatcacaccgcttcctcacctcgcccatgtctcgcataatggc
ggaaaccatgcacccgtggagtccaatgcagaatcgcgcgatacgaatgaagaatctaat
gtcagggatggagaggcatttagtgggagtgatgctagagacaaggagttgaaggtgcaa
ttagaggcacttcttgaagaatttttggcacaagcggtacaaccagaatcgaatcttatg
tctgtggatgattcagacgtaccaaccgagccgtaa
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