Procambarus clarkii (red swamp crayfish): 123770354
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Entry
123770354 CDS
T07930
Name
(RefSeq) lipoma-preferred partner homolog isoform X1
KO
K16682
LIM domain-containing protein
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123770354
03036 Chromosome and associated proteins [BR:
pcla03036
]
123770354
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123770354
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
123770354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF6141
Motif
Other DBs
NCBI-GeneID:
123770354
NCBI-ProteinID:
XP_045618139
LinkDB
All DBs
Position
14:36215268..36448121
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AA seq
1021 aa
AA seq
DB search
MARYGSDPATETNRLLHTLSLCKSEGVHSNGGMGGESEPVLASSHHGYGRILPRAASGAG
AGADASPAAHNLPRIGAIESLIKQEGVGCQGAQVHEVLDSRRVIAAAKFATPKLPESVVV
CGAPNGGVTPPSCLVTGSLTAATVGYAHITPVTSATHLLPVTSAAHHLPLTSATHHHPVT
SAAHHLPVTSATHLLPVTSATHHLPVTSAAHHLPVTSATHHLPVTSAAHHLPVTSAAHHL
SVTSTTHHLPVTSAAHLPNGGTSLAKPLNGQSLYSGHVRYEPPPIYGRNNPSNSAHSSPR
SSLSGGSHDSLNSGHNSRTIPQPTTHHSSEFVVKPSFVGQLHTYENINSYHHYGPQGGLA
ATIIENKYASPRSSVSSQDSKHSSPRCSLVHSLQGSSLDRTSLASQTILEEGSLHRPTIV
NRHLPPRIEQDLEGKEFVIPRNNAYVQENARHNSQWSVSSDCVRHRGIYYDALPPPPVPP
HSVGLSRPTHTPVATPSPTALPPPPPYPGKPPSLNSASSTEASESSASVGSSRATSVVFP
IVTSTHNYANIEVLKSVSGADPPPPPPYPSSLVRQFQNLGLSSTQCSVGAHSPISSTPST
PSTPSTPQSLLRSGGAPPPPPPPYPSSVVRAAQQQYIVPPPPPPYPSSVVRSITSVQSYV
PTTIGLITGQIAQVPPPPPPYPSTAVRSVAYKQNNSNMSQNNNTNNALNTPSDRLAQWQH
KLGSGAHTPQSPSCNMSTVSPGITTGHAHTPPTPSSMSTTAKPVSGKNLLPYNVTAKSMG
MSEAERKLEALTQQIEEEMEKQEQEGEYYGVCHTCGDKVTGAGQACQAMGNLYHTNCFIC
CSCGRALRGKAFYNVHGKVYCEEDYLYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGC
FRCCICNECLDGVPFTVDVDNKIYCVHDYHRMFAPKCAACGKSITPVEGTGETVRVVSMD
KDFHVDCYVCESCGLQLTDEPDQRCYPLDGRLLCRNCHLHRLHAMGRTSSNIQDVGATYV
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctatggcagcgacccggccacagagaccaaccgtttgctgcacacgctgagt
ctgtgcaagtctgagggtgtccactccaatggtggcatgggaggggagagtgagcccgtg
ttggcctcctcccaccatggctacggccgcatactgccgcgtgcggccagcggcgcaggc
gcgggcgcagacgcatcacctgcggcccacaacctccccaggatcggcgccatagagagt
ctgatcaagcaggaaggtgtcggctgccagggtgcacaggtgcatgaggtgctggactcc
cgccgggtgattgctgccgccaagttcgccaccccgaagctgccggagagtgtggtggtg
tgtggggcccccaatggtggcgtgacacccccctcctgtctggtcactggctccctcact
gctgccactgttggctacgcccatatcacccctgtcactagtgccacccaccttcttcct
gtcactagtgccgcccatcacctgcctctcactagtgccacccatcaccaccctgtcact
agtgccgcccaccacctccccgtcaccagtgccacccaccttcttcctgtcaccagtgcc
acccaccaccttcctgtcactagtgccgcccatcacctccctgtcaccagtgccacccac
cacctccctgtcactagtgccgcccatcacctccctgtcaccagtgccgcccaccacctt
tctgtcactagtaccacccaccaccttcctgtcaccagtgccgcccacctccccaacggt
ggcacctcgctggctaagcctctcaacggacagtctctgtactccggacatgtgcggtac
gaacctccgcctatttacggccgcaacaaccccagtaactccgctcactcgagtcctcgc
tcgagcttgagcggcggcagtcacgattctctgaattccggccacaactctcgaaccatt
ccacagccaacgacgcaccattccagtgaatttgttgtgaaacctagttttgtaggacaa
cttcatacgtatgaaaatataaatagttatcaccattacggaccgcagggtggtttggcg
gctaccattattgaaaataagtatgccagtccacgttccagtgtaagttcccaggactcg
aagcattccagcccaaggtgcagcttagtacattccttacaaggttctagtctagataga
acaagtttagccagtcagactatattggaagagggtagtttgcataggcctacgatagtt
aataggcatttgccccctcgtatagaacaggacttggaaggcaaagaatttgttattcca
agaaacaatgcgtatgttcaagaaaacgctaggcataattctcagtggagtgtgagtagt
gactgtgttagacatcgtggaatttattatgacgctcttccgcctccccccgttccacct
cactctgtaggtctctctcgaccaacgcacacacccgttgcgactccgagccctaccgcc
cttccacctcctccaccttaccctggaaaaccacctagcttaaattcagcatcttcgaca
gaagcgagcgaatcttctgcgtccgttggaagttcgcgtgctacgtctgtcgtgtttcct
atagtgacttcaactcataattatgctaacattgaggtgctaaagagtgtttctggagcc
gatccaccaccgccgccaccttacccatcgtctcttgtacgccagttccaaaacctgggc
ttgtccagtacgcagtgttctgtaggagcacactctccaatttcttcgactccttcgacc
ccatcaactccgtcgactcctcagagcttattaaggagtggaggagccccacctccgcca
ccaccaccgtatccgtcctctgtggtaagggcagcccaacagcaatatattgtcccacct
ccgccacctccatacccgtcatcagtagtgagaagcatcacctctgtacagtcatacgtt
cccaccaccataggtctaatcaccggacaaatagctcaagttccgccgcctcctccaccg
tacccttcaacggcggtgcgtagtgtagcttacaaacaaaacaacagcaatatgagtcaa
aacaacaataccaacaatgcgctgaacactccgagtgatcgtttagcacagtggcaacac
aaattgggcagtggtgcgcacacgccccaatcgccatcctgcaacatgtcgaccgtgtct
ccgggcatcaccacaggccacgcgcacacgccgccgaccccgtcttcaatgtccacgacg
gccaagcctgtcagcggcaagaatcttctgccgtataatgttacagcaaaatcaatgggg
atgagcgaggctgagaggaagctggaggctctgacgcagcagatagaggaggagatggag
aagcaagaacaggagggagaatattatggtgtttgtcacacgtgtggagacaaagtgact
ggtgcggggcaggcgtgtcaggctatggggaatctttatcacaccaattgcttcatctgt
tgctcctgcggacgtgctctgcggggaaaggcattctacaatgtccacggtaaagtgtac
tgcgaggaagactacctttactctggtttccagcagactgcggagaaatgtgcaatctgc
ggccaccttattatggaaatgatattacaagcaatgggcaagtcttaccatccagggtgc
ttccgatgctgcatatgtaatgagtgtttagatggcgtgccatttacagttgatgtcgac
aacaagatctactgtgtccatgattatcatagaatgtttgccccaaagtgtgcagcttgt
ggaaagagcataaccccagtcgagggcacaggggagactgtacgagtagtctccatggat
aaggacttccatgtggactgctatgtgtgtgagagttgtggtttacaactgactgatgaa
cctgatcaacgatgctacccactagatggtcgtctcttatgccgcaactgtcacttacat
cgtcttcatgcaatgggtcgtacatcttccaacattcaggatgtcggtgccacatatgta
gaataa
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