Procambarus clarkii (red swamp crayfish): 123770628
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Entry
123770628 CDS
T07930
Symbol
Tnpo-SR
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123770628 (Tnpo-SR)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123770628 (Tnpo-SR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcla03016
]
123770628 (Tnpo-SR)
Transfer RNA biogenesis [BR:
pcla03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
123770628 (Tnpo-SR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_2nd
TPR_TNPO3_IPO13_3rd
Xpo1
IBN_N
PML_CC
Motif
Other DBs
NCBI-GeneID:
123770628
NCBI-ProteinID:
XP_069157957
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Position
46:complement(27431945..27504439)
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AA seq
943 aa
AA seq
DB search
MEVDISEVLAAVNTLYDAELHDKVKHDQASKWLGQLQRSVQAWKVADQLLHAKRDVNSCF
FAAQTLRTKIQLYFGELPVEAHASLRASMLEHLSHITEHTYQGIATQLCVALADLALHMA
SWEDPIGDLITQLGPRSSTPNLVPLLEVLIALPEELHSRQLRLGLNRRKQLDEYFRRKVP
SIVELLHVAVSTEGATKESTHLKALRCMASWFNIHTEEWVMLTNTCLVSDILNVVRNPQV
SPRLHEIATDCVCSAMIMLEAERIQPLAEVLFAGVLQLGEPYHMAVAMEDINAITNYARI
FSELGETLVEVMVEQPDQGLGSLQVLHLLLTCIGHHDWEVAEITFNFWYKLSEVLYRKNC
DNVNEQFKPYVERLIEALYRHCQIEPDHESILVQQDDFYEFRERVQELIKDVVFICGSKL
CFQQMAHILQSPDVTKNWNLMEAALFIMQSVAKNLVPDLERQNHHTVDTNREESEVVPPI
LEGLLGQPDDIHLQVAFTSVQLLAELNEWIACHPSLLPLVLQFLTKRLHNKHLATVAAKA
LDAVCQSCRDHIEQHFDGLMHIIASLDSFSISNEAVVGLLKGVSSILGRFPKERIKEDMK
KLCLVQVSHLQKLIEENIPIEKNSKTDPVVWLDRLAAIFRNVNPIVQNGERHPCQEVVME
VWPTLSLTFQRYSSDLRVMEHCCRCLRFAVRCVHQHSAPLLSPLVEQIVGLYAAHGHSCF
LYLGSILVDEYASEVGCVTGLLAMLEAFTQPTFLLLTQPNGFRDHPDTVDDWFRLCARFL
QRAPVAFLQCSALNTILECGLQACMLDHKEANAAVLKFFQDLVEAGRKHDDRPDFETRHT
LVVNIFNTHGENLVSNLVTAAVFILPQYMHHDVAETFFQIMQFDRPKFCLWLEAKLKVLP
TKNSGGVEAITQTELVEFHKAVTQAERTKEITRALVDFSRFFS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacatcagcgaggtgttggccgccgtcaacactctctacgacgccgagctc
catgacaaggtcaagcacgaccaggcctccaagtggctgggccagctgcagcgttctgta
caagcttggaaggtagcagatcagttactacatgcaaaacgtgatgtgaattcgtgcttc
tttgcggcacagacgcttcgcaccaaaatacagttgtattttggtgagttgccagtggag
gctcatgcctccctccgtgcctcaatgttggagcaccttagtcacattacggagcacacg
tatcagggcattgctactcaactctgcgtggctttggctgacttggcgctgcacatggca
tcatgggaagatcccattggagatttaattactcaacttggaccaaggtccagcacccct
aacttggttcctttactggaagtccttatagcacttcctgaagaacttcattccagacag
ttacgattaggattaaatcggagaaagcagctcgacgagtacttcagaaggaaagttcct
agtatagtagaattactgcatgttgctgtgagtacagaaggagccaccaaagagagcaca
cacttgaaggcgctacgctgcatggcgtcttggtttaacattcacacggaagaatgggtg
atgctcactaacacctgccttgttagtgacatattaaatgttgttagaaatcctcaggtc
tcgcccaggttacatgaaatagcaacagactgtgtttgctctgcaatgatcatgttggaa
gcagagagaatccagcccttggcagaggtgctgtttgctggggttttgcagcttggtgag
ccgtaccacatggcagtggccatggaagatattaatgcaataaccaattatgcaaggatt
ttctccgagctgggcgagacactagtggaggtgatggtagagcagccggaccaagggttg
gggtcactccaggttcttcatcttcttctgacctgtattgggcatcatgactgggaggtt
gccgagatcacgttcaacttctggtacaaactatcggaggtactctacagaaaaaactgt
gacaacgtaaatgaacagtttaagccttatgttgagcgactaattgaggccctttatcgg
cactgtcagatagagcccgatcatgagagcatactggttcagcaagacgacttctacgag
ttccgagagcgagtgcaagagttgattaaggatgtggtgtttatttgtggctccaaactg
tgtttccagcagatggcacacatactccagtcaccagacgtgaccaagaactggaatctg
atggaggctgcgttgttcatcatgcagagcgtggctaagaatcttgtaccggaccttgag
cgccagaaccatcacacggtagacactaatagagaggagagcgaagtggtccctccgatc
ttggaaggcttgctcggccagcccgacgacatacacttgcaagtggcgtttacgtcggtt
cagttactcgccgagctcaacgagtggatcgcctgccaccccagcttgcttcctcttgtc
cttcagtttctgactaaacggctgcataataaacacctggcaacagtggctgctaaggcc
ttggatgctgtgtgccagagctgccgcgaccacattgagcagcactttgacggactgatg
cacatcattgcgtccctcgactcgttcagcatcagcaacgaggctgtggttggcctcctg
aaaggcgtttcgtcaattcttggaaggtttccaaaagaaagaattaaggaagacatgaaa
aagttgtgtttagttcaagtttctcatttacagaagttgatagaggaaaacataccaatc
gaaaagaactctaaaactgatccagtggtatggttggatcggctggctgctatattcaga
aatgttaatccaattgtccaaaatggtgaacgacatccttgccaggaagtggttatggag
gtgtggcctactctttcactgacgttccagaggtatagttcagatttacgggtaatggaa
cattgctgtcggtgtttgcggtttgcagtccgctgtgttcatcagcactctgcaccactt
ctatcccctcttgtggaacagattgttggcttatatgctgcacatggccacagttgtttc
ctgtacctgggcagcattctggttgacgaatatgccagcgaggttggatgtgtgacgggt
cttttggccatgttggaagcttttacgcaaccaaccttcctgctcctcacgcagcccaat
ggcttcagagatcatcccgatactgtcgacgactggttcagattgtgcgccagattcctt
cagcgagcaccagttgctttccttcagtgttcagccttaaacacgatccttgagtgtgga
cttcaggcgtgcatgttggaccataaggaagcaaatgcagccgtactcaagttctttcaa
gatttagtggaggcagggcgtaaacacgatgaccgacccgattttgaaactcggcacacg
ttggtcgttaatatttttaatactcacggcgagaatttagtgagcaacctggtcactgcc
gccgtctttattctccctcagtacatgcatcacgatgttgccgaaactttcttccagatt
atgcaatttgaccgtccaaagttttgtctgtggttagaggcgaagttaaaggtgttgcca
accaagaattccgggggtgtggaggcaatcactcagaccgagttggtggagttccacaag
gctgtgacacaggcggagcgcaccaaggaaattactagagcgctggtagacttttcaaga
ttcttcagctga
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