Procambarus clarkii (red swamp crayfish): 123770960
Help
Entry
123770960 CDS
T07930
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123770960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123770960
Enzymes [BR:
pcla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
123770960
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123770960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
123770960
NCBI-ProteinID:
XP_069161803
LinkDB
All DBs
Position
56:complement(6478984..6485863)
Genome browser
AA seq
299 aa
AA seq
DB search
MVQPLPEKLEQFKSLVKCNIPTVYDTKLLAKDPPFCVDIPVTSLGAVYRVRNNVCSKFNP
PHRVIEEGYESYETGSNSKAHDAGFDAFITGVCFVTMVKKLDGSNWKNKSVVKSKHLDMY
ANRVNNMSSHDIPFLNLVGPDVQPDRSKIFCAECPSSWTTMHVHGLFHMIKPLKIVWVSS
TFLYVIPLEDMDKKVCRQHLKNVNASCPPLVRVRLYGDTISSKRKSATDEEVSPIQIRAS
RIHEFKRLKSVGSDQLSKMTLESPSAEEPPSVISGDNGKKAAPKQGKATQDVFSIPDEW
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcctttgcctgagaaactggagcagttcaagtctcttgtcaagtgcaatatt
cccactgtatatgataccaaacttctagcaaaggatcctcctttctgtgtagatattcca
gtgacatctttaggagctgtgtatagagtacgtaacaatgtgtgtagcaagttcaacccc
ccacaccgtgtgattgaagagggttatgagagttatgaaactggaagcaacagcaaggct
catgacgcaggtttcgatgccttcataaccggtgtttgttttgttaccatggtgaagaag
ctggatggatctaattggaaaaacaagtctgtggtgaagtcaaaacacctggacatgtat
gcaaacagagtgaacaacatgagctcccatgacattccattcctcaacttggtgggacct
gatgttcagcctgacaggagcaaaatattttgtgcggagtgtccatcctcatggactaca
atgcatgtccatggactctttcatatgattaaacctttgaagatagtgtgggtgagcagc
actttcctctacgtcattcccttggaagacatggacaagaaggtctgtaggcaacatctg
aagaatgttaatgctagctgtcctccattggttcgagtaagattgtatggggatacaatt
agctcaaagagaaaatctgcaacagatgaggaggtttcaccaattcagatacgagcaagc
cgcatacacgagttcaaaagactgaagagtgttggatcagatcaactatcaaagatgacc
ttggagtctccaagtgcagaagaacctccttccgtaattagtggagataatggcaagaaa
gctgcaccaaaacaaggcaaagcgactcaggatgtattttctatacctgatgagtggtag
DBGET
integrated database retrieval system
