Procambarus clarkii (red swamp crayfish): 123771073
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Entry
123771073 CDS
T07930
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123771073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123771073
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123771073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
123771073
NCBI-ProteinID:
XP_045619338
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Position
65:complement(20887920..20896508)
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AA seq
420 aa
AA seq
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MADVQDDDQWLYGDEKDDPREDGEINDRPEADPDDARKENEQSRDMSVEEGSRETEKEKD
GEDKGDKEKEGEKEPGEKGDDDDSSDDDDLTITIGVIKTQPDIIQAPTAPHSARFQPKAA
PNTGLKDDDFTSPGKINGVPMTEYNLADLEDKPWRKPGADISDYFNYGFNEETWFKYCER
QKRMRISESGAGLTGLGISVTKPFGNAPNSIPVTIVNDNSKYGGAGAQRPKAGPPPRNKM
GQIDVIGGTSNPNKPSTIQVMTADRREYSNKVMMNGPPPPLPPNQPGYNDMEFGGNPYGD
SYYSGDTPFYGGPGFENPPPWGPGGQPPMPGQNNWEGPGGGPQNVTPVSGGAGYFEEESV
SAPPAPSEPEEERHRSRRGHRSRSRSPTRHRHSSRHPRSRSRSPSHRHKRKKSKRERDAD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtccaggatgacgaccagtggctctatggcgacgagaaggacgaccccagg
gaagacggagagataaatgacagacctgaggctgaccccgatgatgccaggaaggaaaat
gagcagagcagagatatgtctgtggaagagggcagtagggaaactgaaaaggagaaagat
ggagaagataaaggagataaagaaaaggaaggtgaaaaagagcccggcgagaaaggagac
gacgatgacagtagtgatgatgatgacctcactattaccattggtgttatcaaaacacaa
ccagatatcatacaagctcctacagcgcctcactcggctaggttccagcctaaggctgca
ccgaacacaggcttgaaggatgatgattttacttctccgggaaaaattaatggggtacct
atgacagaatataaccttgctgatttggaggataaaccatggaggaaacctggagctgat
atttcagattattttaattatggttttaatgaagagacctggttcaaatactgcgagcgt
cagaagaggatgagaatttccgagtctggtgccggtttaactggtcttggaattagcgtg
accaagccatttggtaatgctcccaacagcattccagtgacaatagtcaatgataatagt
aaatacggcggtgctggagctcagaggccgaaggcaggaccccctcctcgtaataaaatg
ggacagattgacgttattggtggaacctccaaccctaacaaaccgagtacaattcaggtt
atgacagctgacagacgagagtactccaataaagtaatgatgaatggtcctccaccacca
ttgccacctaaccagccgggctacaatgatatggagtttggtggtaatccatatggggat
tcatattattcaggtgatactccattttatggaggtcctggatttgagaatcctccacca
tggggacctggtggacaacctccaatgccaggtcagaataattgggagggacctggaggt
ggtccccaaaatgtcacacctgtatcaggtggagcgggttactttgaagaagaatctgtt
agtgctccaccagcaccttctgaacctgaggaagaaagacacagatctcgaagaggccat
agatcccgaagtcgatccccaacacgtcacaggcactctagtcgacatccaagatctcgt
tctcgatcaccatctcatagacacaaacgcaagaagtcgaaaagggagcgtgacgcagat
taa
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