Procambarus clarkii (red swamp crayfish): 123771085
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Entry
123771085 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04137
Mitophagy - animal
pcla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123771085
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123771085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123771085
03009 Ribosome biogenesis [BR:
pcla03009
]
123771085
04131 Membrane trafficking [BR:
pcla04131
]
123771085
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcla04147
]
123771085
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123771085
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123771085
Membrane trafficking [BR:
pcla04131
]
SNARE
SNARE associated proteins
Others
123771085
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123771085
Exosome [BR:
pcla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123771085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_5
CDC48_2
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
AAA_28
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_17
Vps4_C
ATPase
ATPase_2
IstB_IS21
AAA_7
AAA_18
ABC_tran
DUF815
AAA_24
NB-ARC
ResIII
Sigma54_activat
TsaE
Viral_helicase1
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
123771085
NCBI-ProteinID:
XP_045619363
LinkDB
All DBs
Position
65:20103457..20129635
Genome browser
AA seq
797 aa
AA seq
DB search
MAGLRVREDLATAILKEKKKPNRLIVEDAVNDDNSVVALSQAKMDELQLFRGDTVLIKGK
KRKQTVCIVLSDDTMSDDKVRMNRVVRNNLRIRLGDIVAIQPCPDVKYGKRIHVLPIDDT
VEGLTGNIFEVFLKPYFLEAYRPIHKGDLFLVRGGMRAVEFKVVETDPAPYCIVSQDTVI
YCEGEPVKREEEEEQLNEVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL
LYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIF
IDEIDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDPALRRFGR
FDREVDISIPDTTGRLEVLRIHTKNMKLSDDVDLEQIAAETHGHVGADLAALCSEAALQQ
IREKMDLIDLDDDQIDAEVLNSLAVTMENFRFAMGKSTPSALRETVVEVPNITWHDIGGL
ENVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI
KGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSAGDAGGAADRVIN
QVLTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVQILKACLR
KSPVSKRVDLDYLAKVSHGFSGADLTEICQRACKLAIRQAIEADIKRERERAAGDNMDME
EEDPVPEITRDHFEEAMKYARRSVSDNDIRKYEMFSQTLQQSRGFGSNFRFPDQQGQGGS
SHGGNFGADGEDDDLYS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctcagggtgcgggaagacttagcaacagctatactgaaggagaagaaaaag
ccaaaccgcctcattgtggaagatgccgtcaacgatgacaactctgttgtggcactcagc
caggccaaaatggacgagctccaactcttccgaggtgatacagtgctcatcaaaggcaag
aagcgcaagcagacggtctgcattgtgctctccgatgataccatgtccgacgacaaagtt
cgcatgaaccgtgtagtgagaaacaatctccgcattcgtttgggggatattgttgccatt
cagccatgcccagatgtgaagtatggcaagcgtattcatgttctgcccattgatgacacg
gtagaaggtctcactggtaatatttttgaggtgttcctgaaaccctacttcctggaagct
tatcggcccatccacaaaggtgacctctttcttgtgcgtggtggcatgagagcggtagag
tttaaagtggtagaaaccgacccagcaccatattgcattgtatctcaagacactgttatt
tactgtgagggtgaaccagtgaagcgtgaggaggaagaggaacagttaaatgaagttggt
tatgatgacatcggtgggtgcagaaaacaactggctcaaatcaaagagatggtggagttg
ccgttgcgccatccctctctcttcaaggccattggtgttaaaccaccaagaggtatttta
ttatatggacccccgggaacaggaaaaacgctcattgcacgagctgttgctaatgaaacg
ggagctttcttcttcctgataaatggcccagaaattatgtctaaattagcaggcgaatct
gaaagcaatctacggaaagcgtttgaagaggcagaaaagaattcgcctgccattattttc
atagatgaaattgatgccatcgcaccaaaacgtgaaaagacacacggagaagttgagcga
cgcattgtatcacagttgttgacattgatggatggcctaaagcagcgctcacatgttatt
gttatggctgccacaaacagaccaaactctattgatcctgctcttaggcgatttggtcgt
tttgacagagaagttgacatcagtatcccagatactacaggtcgtcttgaagtcctgcgt
attcacaccaaaaatatgaagctctccgatgatgtggacctggaacagattgctgccgag
actcacggccatgttggtgctgatctggctgctctctgctcagaagctgcccttcagcaa
atccgtgaaaagatggatcttattgatcttgatgatgaccagattgatgctgaggtactt
aattctctagcagtgactatggagaacttcaggtttgccatgggcaagagcacaccatca
gccctccgtgagactgtagtggaggtgcccaacattacctggcatgacattggtggcttg
gagaatgttaagagagagttgcaggagctggtccagtatcctgtggagcacccagacaag
ttcctcaagtttggtatgacccccagcaagggtgtcttgttctatggccctcctggttgt
ggtaagacgctgttagcaaaggctattgctaatgaatgtcaagctaacttcatctcaatc
aagggtccagaattacttaccatgtggtttggtgaatcagaagctaatgtgagagatgtg
tttgataaggctcgtgctgctgcaccttgtgtgttgttcttcgatgagttggacagcatt
gccaaggcccgaggaggttctgcgggtgatgcaggcggagctgctgaccgagtcattaat
caggtacttacggaaatggatggaatgggtgccaagaaaaatgtcttcatcatcggtgca
acaaacagacctgatattattgatccagctattttacgaccagggcgtttggaccagttg
atctacataccccttcctgatgaaaagtctagagtacagatccttaaggcatgcttgagg
aaatccccagtgtctaagcgggtggatctggattaccttgcgaaagtgtcccatggattc
tctggtgcggatctgacagaaatctgccagagggcttgcaagctggctatcaggcaggct
attgaagcagacatcaagcgggagagagagcgagctgctggagacaacatggatatggag
gaagaagaccctgtgccagagataactcgggatcactttgaagaagctatgaagtatgct
cgccgttctgtttcagacaatgatattcgcaaatatgaaatgttctcccagacgcttcag
cagagtcgagggtttgggtccaattttcggttcccagatcaacaaggtcagggaggcagc
agccacggtggaaactttggtgcagatggagaggatgatgatctatactcttaa
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