Procambarus clarkii (red swamp crayfish): 123771506
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Entry
123771506 CDS
T07930
Symbol
Atg4b
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04136
Autophagy - other
pcla04140
Autophagy - animal
pcla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
123771506 (Atg4b)
04140 Autophagy - animal
123771506 (Atg4b)
04136 Autophagy - other
123771506 (Atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcla01002
]
123771506 (Atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123771506 (Atg4b)
03029 Mitochondrial biogenesis [BR:
pcla03029
]
123771506 (Atg4b)
Peptidases and inhibitors [BR:
pcla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
123771506 (Atg4b)
Membrane trafficking [BR:
pcla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
123771506 (Atg4b)
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123771506 (Atg4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
YkpC
Motif
Other DBs
NCBI-GeneID:
123771506
NCBI-ProteinID:
XP_045620053
LinkDB
All DBs
Position
76:16823866..16837944
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AA seq
764 aa
AA seq
DB search
MIPSIQSVASRRAGPRHQHRRSSSGSHELRNQTALPIPMAQECIEAPRFLHDFVYVHNPS
RDPSLRHMAEEQNLPTDRSNKLTRVKLTKSPNSDRDTGKFFVRTAGGMSVSIPELPPEPT
STAENVRVNIATPQPVSQLEDSTLKSTVTPAITPVTKTRTNQTNSYLPLSVELIAGRGQT
SMPSDGNKSTTNTKVRSLPPSHTLAMSASFIKSYFSSGPEKQQSKSAGSTPETETSVKTK
MLGLWNNVKFGWTVNLKTNFSRDSPVYLLGCVYHKCLGEDEENSEEEVERHGMEAFKRHF
HSLVWCTYRRQFPTLQDSTLTTDCGWGCMLRTGQMMLAHALIRHFLTKDWRYNKNITGPD
DLVHRSILRWFGDSPSPHCPLSLHNLVHFGQKLGKKAGDWYGPASVAYIFKEAVEMGSKY
IPDLQRVCVYVAQDCAVYIQDVLDLCFSSCVCNKGNLINVAKVIHKRKSTVPQGGFSLPA
DKLGSSPVFKKASKADQMDGNKLSSEKRYCQENEVEQDTGLDSEIIMNGKCCKDSQTEMS
RQTQKWHFFSSNLSTGVNDQETDESVNREKQDGLVGSQSFEQCSVCDNWRSVLVMVPIRL
GGEALNPIYAPCLYSLFTHDLCVGIIGGRPRHSLYFVGFQDDSLIHLDPHLCQDAVMVTQ
QYFSLSSYHCSSPRKMALSRMDPSATLGFYCHSRLDFLRLMEELPELVTPKQPGFEYPIF
EFLDGRCEDADACARQVTTEDEMAASLPGDTPLLPQDSEEFVFL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgattcccagtattcagtctgtagctagtagacgtgcaggtcctcggcatcagcataga
aggtcctccagtggcagccatgaactgaggaaccagactgctttgcccattcctatggcc
caggaatgcatcgaggctccaagatttctgcatgattttgtgtatgtgcataacccctct
cgtgatccaagcttgaggcatatggctgaagaacagaatttaccaacagaccggagtaac
aaattaacacgagttaaactcactaaatctcccaattctgaccgtgacacgggtaaattt
tttgtaaggactgcagggggcatgagtgtctcgataccggagcttccacccgaaccaaca
agcacagcagaaaacgtgcgtgtgaacattgcaacaccacaacctgtatcacaacttgaa
gatagtactttgaagagcactgttaccccagccattacaccagttacgaagacccgtaca
aatcagaccaacagttatttacccctcagtgtggaactcattgcaggtagaggtcaaacc
agtatgcccagtgatggtaataagagcactaccaacaccaaagtgagaagtttgccgcca
tctcacacactggctatgtctgcttcatttatcaaatcatattttagttctggtcctgaa
aaacaacaatcaaagagtgctggctcaactccagagactgagacttctgtcaagacaaaa
atgttaggattatggaataatgttaaatttggttggacagttaatctaaaaacaaatttc
tcaagggattcaccagtttacctcctaggctgtgtgtatcataaatgtttaggtgaagat
gaagagaattccgaggaggaggtagagaggcatggcatggaagcattcaaacgccacttt
cacagtctagtatggtgtacatatcggcgacagttccccaccttgcaggactctactcta
accactgattgtggctggggctgtatgttaagaacaggccagatgatgctagctcatgct
ctcatccgacacttcctcacaaaagactggcgatacaacaagaatataacaggaccagat
gacttggttcatcgaagcatcttgcggtggttcggtgactccccgtcaccacattgtcca
ctgtcacttcataacttggttcactttgggcaaaagttgggaaagaaagcaggggattgg
tatggaccagcatctgtagcttacatatttaaagaggctgtggaaatgggctccaagtac
attcctgatttacagagagtttgtgtttatgttgctcaagattgtgccgtatacatccaa
gatgttttggacctctgcttctcttcctgtgtgtgtaataaaggcaatcttattaacgtg
gcaaaagttattcataaaagaaaatctactgtgcctcaaggaggattttcacttccagct
gataaacttggttcctccccagtgtttaaaaaggcttctaaggctgaccaaatggacgga
aataagttaagtagtgagaaaagatattgtcaagaaaatgaagtggaacaggatactgga
ctagactctgaaataatcatgaatggaaaatgttgtaaagattcccagacagagatgtcg
agacagacacagaagtggcatttcttctcgtcaaatttatccacgggtgttaatgaccaa
gaaacggatgaaagtgtaaatcgagaaaaacaagatggacttgtgggcagccaatcattt
gagcagtgttcagtgtgtgataattggagatctgttctggtaatggtccctattagatta
ggaggtgaagctttaaatcctatatacgctccatgtttatattctctctttacgcacgac
ttatgtgttggcatcattggaggacgaccaaggcactcgctctactttgtgggattccaa
gatgattcactgatccacttggacccacacctttgccaagatgctgtcatggtgacccag
caatatttctctctttcctcctaccattgttcttccccacgcaaaatggcactttcccgc
atggacccttctgctaccttgggcttctactgccactcaagactagactttttacgactg
atggaggaacttccagagcttgttacacccaagcagccaggatttgaatacccaatattt
gagttcttggatggtcggtgcgaagatgccgacgcctgcgctcgacaagttactacagaa
gatgaaatggccgcttctctaccaggagataccccactcctccctcaagattccgaagag
tttgtgttcctctga
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integrated database retrieval system
