Procambarus clarkii (red swamp crayfish): 123771616
Help
Entry
123771616 CDS
T07930
Symbol
arr
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04150
mTOR signaling pathway
pcla04310
Wnt signaling pathway
pcla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123771616 (arr)
04150 mTOR signaling pathway
123771616 (arr)
09133 Signaling molecules and interaction
04519 Cadherin signaling
123771616 (arr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123771616 (arr)
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123771616 (arr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
EGF_LRP2
SGL
Ldl_recept_a
Vgb_lyase
LRP1-like_beta_prop
cEGF
EGF
Sensor
Rv3627c_N
DUF5818
Motif
Other DBs
NCBI-GeneID:
123771616
NCBI-ProteinID:
XP_045620165
LinkDB
All DBs
Position
75:26383772..26509255
Genome browser
AA seq
1647 aa
AA seq
DB search
MCTHWIPLLAIIACLAHTQGYPELLFANRKDIRIIEVGKERQSRQVIKDVTDAASVDYYY
KGQLVCWTDIDNEVIKCVQVNKIGGGTKGHKEVTVISRGIISPDGLAIDWLSEKLYWTDS
DTNKIEVAGLYTKHRCVLFWQDLDQPRAIALVPAEGLMFWSDWGENPKIEKAGMNGDSST
RQVIVQDEIFWPNGLTVDYEQRVIYWADAKLNYIASVDFDGKRRTKVVQSKLPHPFALTY
FNHTLYWTDWETRAIHYCSVGQRRSCDKQQQLGTNLSPMYIHVYDPARQLHVNTPCQNNN
GGCSHLCLAAPTPHNFTCACPTGVKLIDEFNCSNGPEEMLILARRTDLRRISLDTPDHTA
VVIPVLGVKHAIAVDIDPIDSFIYWTDDETLRIHRAKLDGSEQEVIVSAEVVHPDGIAVD
WIARNLYWTDAGPDRIEVARLNGTSRKILIADNLDEPRAIAIDPDGGLMFWTDWGTNPKI
ERAALDGSMRQVIINSGLGWPNGVAIDSELRKIYWCDAKEDKIEMAALDGSERRVVLSEH
LPHVFGFSLLGDFLYWTDWQRRSIERVNKFDATQREVIVEQLPDLMGLKAVNVSNKAGFN
PCRKNNGGCSHLCLNRPTNYTCGCPIGYELTQNEKECVVPEAFLLYTRKEDIRRISLLTS
HNVPIPVTGIQQAMSIDFDSVDNRLYWTDIRVKSISRAFMNGSQMEPVIELGLSFPEGMA
VDWLARNIYWADMGNNRIEVARLNGTSRRVLLWQNIASPKSLALDPGQGYMYWSEWGDEP
SISHAHLDASQPSPIVTKMGRANGLTIDFKDSRLYWTDIDNFLIESSDLNGRNREVVVRD
LPQPYGLTLYEDYVYWADWKTGTIERANKSKGENRTRIQGQLDFIMDILVFHSSRQSGKN
PCSVDNGGCSHLCLAVPASNGSQNYTCSCPTHYKLDRDGKTCRAPTSFLLFSQKSEVSRL
VEDASECPTLILPIHSMRNVRAIDYDPVDQLVYWVDGRGPTLRRAHHNGTQSEVFVSNAM
EKIYPYDIAVEPFTRVLFWSCARNNVINITKLDGTQVGGIIGHEGEDQPRSLAVHSVLGL
LFFINMVSPPLIEQAHIDGLHRRKIITEGLTSPSALAVDAQDNFLFWADTTTKRIETATI
LGEDRKVLVDKKLEQPVGLAVHEDFLYWVDRELTQVERVNKFTGQQREKLQGRIYYLSDI
IAVTPVLSQKMKVHPCHNGSECSHLCLERDQQQRCACPEGKTLADDLKTCINPPSCQPEE
FRCHSGSADCIPLKWRCDGQAECEDKSDEFNCPLPMCQSQFRCKNSQCIDKSEVCDGKRQ
CSDGTDEVGCCDEGQVMCVSTGRCVDTAVHCAGGRRPCPDNPDHALCSTWVIDPPDVNGT
ASKAPYIVGVVVSVVVLVCVAALVVYYRRRPSLLDDHELEPHPKPPQPRSYNIVVTSWGK
SYTSVPGEPPPRDPHMPIGVGGSSAPGICRGIINRGAIARGMFDPAPVTGASSSSSSMTH
YPRETLNPPPTPVAENRGRNQETHCCCNSHQIPTSTLHSYRHYKTRNRPPPPTPCSTDVC
DSDVYSSAVSPRRSHCYTPGSTTYYSSPPMTDYDSDPHPPPPTPQMQYMCDFTSCPPTSS
CPPSPSTERSYCARAPCPPPPSPIASD
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacacactggatcccactactggccattatcgcttgtctagctcacactcagggt
tacccagagttgctgtttgccaaccgcaaagatattcgcattatagaagttggaaaagag
aggcagtcacgccaagttattaaagatgttacagatgcagcatctgtggattactactac
aaggggcagctggtttgttggaccgacattgacaatgaggtcatcaagtgcgtacaggtc
aacaagatcggtggagggacaaagggacataaagaggtgacagtaatatcaaggggaatt
atatcacctgatggcttggcaattgactggctgagtgagaagctatattggaccgactct
gacaccaacaaaattgaggttgcgggattgtacaccaaacatcgatgtgttcttttctgg
caggaccttgatcaacctagagctattgctcttgttcctgctgaagggctgatgttttgg
agtgattggggcgaaaatcccaagattgagaaagctggtatgaatggcgactcctccaca
agacaagtcattgttcaagatgaaatattttggcccaatggtctgacggtggattacgaa
cagcgggttatatactgggcagatgccaagctcaactatattgcttcagtggattttgat
ggcaagagaagaacaaaggtggtccagagcaagttgcctcatccgtttgctttgacgtac
ttcaaccacaccttatactggacagactgggagacgagagctatacactactgcagcgtt
ggtcagaggagaagttgtgacaagcagcaacaacttgggacaaacctctccccaatgtac
atccatgtttatgaccctgcacggcagcttcacgtcaacactccgtgccagaacaacaat
ggaggatgcagtcacctgtgtttagcagctccaacgcctcataacttcacttgtgcgtgt
cccacgggagtgaagctcattgacgagttcaactgttccaatggaccagaagagatgctg
atactggctcgtcgaacagatttgcgccgcatatctctggacactccagatcacacggct
gttgtcattcctgtgctgggcgttaaacatgcaattgctgtcgatattgatcccattgac
agcttcatttactggactgatgatgaaacactccgcattcatcgtgctaaattagatgga
tcggaacaagaggtgatagtgtctgctgaagtagtccatccagatggtattgctgtagat
tggattgcacgcaacttatactggacagatgcagggcccgaccggattgaggtcgcaaga
ctcaacggaacttccagaaagattcttattgctgataaccttgatgagccaagagccatt
gcgatagaccctgatggtgggctcatgttctggacagattggggtacaaatccaaagata
gaacgcgcagccctcgatggctctatgcgacaggtcataattaattcaggccttgggtgg
cccaatggtgttgcaattgattcagagctgagaaaaatatattggtgcgatgccaaggaa
gacaaaatcgagatggcagctctggacggcagtgagagaagggtggttctgagtgagcat
cttccacacgtgtttggcttctctctcttgggcgactttttgtactggactgactggcag
aggaggagcatagagagagtcaacaagtttgatgcgacgcagcgcgaggtgatcgtggag
cagctgccagatcttatggggctcaaggcagtgaacgtgagcaataaggctgggttcaat
ccttgtcgcaagaacaatggtggctgctctcacctctgtcttaatagacccaccaactac
acctgtggctgtcctattggttatgaactcactcagaatgagaaggagtgcgttgttcct
gaagcctttctgctgtacacgaggaaggaggacatcagacgcatctccctcctcaccagc
cataacgttcccatccctgtcaccggcatccagcaggccatgtccattgactttgacagt
gttgataatcgactgtactggacggatatcagggtgaagtccatctctcgtgcctttatg
aatggctcccaaatggagcctgttatagagcttggactttcttttcctgaaggcatggct
gttgattggctagctcgcaacatttattgggcagacatgggaaacaacaggattgaagtt
gcaagattaaatggaacatctagacgagttcttctgtggcagaacatcgctagtcccaaa
tctctggcacttgatccgggtcagggctacatgtactggtcagaatggggagatgagcca
agcatatcgcatgcccatctggacgcctcgcagccatctccaattgtcacaaagatgggc
cgtgcaaatggcctcactatcgacttcaaagatagtcgcctgtactggacagatattgac
aatttcttgatagaaagcagtgatttaaatggacgtaacagggaggtggttgttagagat
ttgccgcagccctacggtctgacgctgtacgaggattatgtttattgggctgactggaag
actggtactatagagcgtgcaaacaaaagcaaaggtgaaaacagaacaagaatacagggt
cagcttgattttattatggatattctggtgttccattcatctcgtcagtcaggaaagaat
ccgtgctcggtggataatggtggctgttcccacttgtgtctggcagtgccagcctctaat
ggttcccagaattatacgtgttcttgcccgacccactacaagctagacagggatggcaag
acttgcagagcaccaacatctttcttgttgttcagtcaaaagtctgaagttagccgtctt
gtagaggatgccagcgagtgcccaacactcatactccccattcacagcatgcgtaatgtg
cgtgctattgactacgatccagtagatcaattggtgtactgggtagatggccgtggaccc
accctacgtcgtgctcaccacaatggcacgcagagtgaggtatttgtgagcaatgccatg
gagaagatttatccctacgatatagctgtggaacctttcactagagtcctcttttggtct
tgtgcaagaaacaatgtgataaacataaccaagcttgatggaacacaggtcggtggcatc
attggccatgaaggggaggaccagccacgttcactggcagtccactcggtgcttggtctg
ctattctttataaacatggtgtcccctccactaattgagcaagctcacatagacggcttg
caccgtcgtaagatcatcacggagggtctcacgtctccttcagctctagctgtcgatgct
caggacaattttttgttttgggcagatacaaccacaaaacggattgaaactgcaacaatc
ttaggagaggacaggaaggtgttggtggacaagaagctagagcagcccgtgggtctggct
gtgcacgaggacttcctctactgggtggaccgggagttaacccaggttgaacgcgtcaac
aagtttacaggacagcagagagaaaaattacaagggcgaatatactacctttctgacatc
attgctgtaacacccgtcctctctcagaagatgaaagtgcacccatgtcacaatggaagc
gagtgtagtcacctgtgccttgaaagagatcagcaacagcggtgtgcatgccccgaaggc
aagaccctagcagacgacttgaagacgtgtatcaaccctccaagttgccaacccgaagaa
tttcgctgccactcgggatctgccgattgcattccacttaaatggagatgtgatgggcag
gccgagtgtgaagacaagagtgacgaattcaactgtcccttaccgatgtgtcagtcgcag
tttcgctgtaaaaacagtcaatgcattgataaatctgaggtttgtgatggcaagaggcaa
tgcagtgatggaactgatgaggtaggatgctgtgatgaagggcaagttatgtgcgtttca
acaggacgatgtgtggatactgctgtacactgtgccggaggtcgtcgtccttgtcccgat
aaccctgatcatgctctgtgttccacctgggttatagatcctccagatgtaaatggaaca
gctagtaaagctccatatattgtgggtgttgtggtatcagttgtagtgctagtgtgcgtg
gctgcattagtggtatattaccgaaggaggccatcactcttggacgatcatgaattggaa
cctcatcccaagcctccccagccgagatcatataatattgtggtgacttcctggggtaaa
agctacacatcagtaccgggtgaacctccgccgagagatccccatatgcccattggtgtt
ggtggttcgtcggcacctgggatatgcagaggcattattaatagaggtgcaatagctcga
ggaatgtttgatcctgcaccagtaacgggagcatcatcatcgtcctcttccatgactcat
taccccagagaaacactgaatcctccgcctactcccgtagcagagaacagaggtcggaat
caggaaacccactgttgttgtaattcacatcaaataccgacgtcgactctccactcgtat
cggcactacaagacccgtaacaggcctccccctcccaccccttgctctacagatgtttgt
gattcagatgtttattcgtcagcagtgtcaccacgtagaagccattgttacactccaggc
tctaccacctactactcctctccacccatgacagactatgattcagatcctcaccctcct
cctcctactccacagatgcagtatatgtgtgacttcacttcatgccccccaacctcctcc
tgccctccctctccatccaccgagcgttcgtactgtgctcgtgccccctgtcctcctccg
ccttcaccgatagcatctgactga
DBGET
integrated database retrieval system
