Procambarus clarkii (red swamp crayfish): 123771616
Help
Entry
123771616 CDS
T07930
Symbol
arr
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04150
mTOR signaling pathway
pcla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123771616 (arr)
04150 mTOR signaling pathway
123771616 (arr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123771616 (arr)
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123771616 (arr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
EGF_LRP2
SGL
Ldl_recept_a
Vgb_lyase
cEGF
EGF
Sensor
DUF5818
Motif
Other DBs
NCBI-GeneID:
123771616
NCBI-ProteinID:
XP_045620165
LinkDB
All DBs
Position
75:26383772..26509255
Genome browser
AA seq
1647 aa
AA seq
DB search
MCTHWIPLLAIIACLAHTQGYPELLFANRKDIRIIEVGKERQSRQVIKDVTDAASVDYYY
KGQLVCWTDIDNEVIKCVQVNKIGGGTKGHKEVTVISRGIISPDGLAIDWLSEKLYWTDS
DTNKIEVAGLYTKHRCVLFWQDLDQPRAIALVPAEGLMFWSDWGENPKIEKAGMNGDSST
RQVIVQDEIFWPNGLTVDYEQRVIYWADAKLNYIASVDFDGKRRTKVVQSKLPHPFALTY
FNHTLYWTDWETRAIHYCSVGQRRSCDKQQQLGTNLSPMYIHVYDPARQLHVNTPCQNNN
GGCSHLCLAAPTPHNFTCACPTGVKLIDEFNCSNGPEEMLILARRTDLRRISLDTPDHTA
VVIPVLGVKHAIAVDIDPIDSFIYWTDDETLRIHRAKLDGSEQEVIVSAEVVHPDGIAVD
WIARNLYWTDAGPDRIEVARLNGTSRKILIADNLDEPRAIAIDPDGGLMFWTDWGTNPKI
ERAALDGSMRQVIINSGLGWPNGVAIDSELRKIYWCDAKEDKIEMAALDGSERRVVLSEH
LPHVFGFSLLGDFLYWTDWQRRSIERVNKFDATQREVIVEQLPDLMGLKAVNVSNKAGFN
PCRKNNGGCSHLCLNRPTNYTCGCPIGYELTQNEKECVVPEAFLLYTRKEDIRRISLLTS
HNVPIPVTGIQQAMSIDFDSVDNRLYWTDIRVKSISRAFMNGSQMEPVIELGLSFPEGMA
VDWLARNIYWADMGNNRIEVARLNGTSRRVLLWQNIASPKSLALDPGQGYMYWSEWGDEP
SISHAHLDASQPSPIVTKMGRANGLTIDFKDSRLYWTDIDNFLIESSDLNGRNREVVVRD
LPQPYGLTLYEDYVYWADWKTGTIERANKSKGENRTRIQGQLDFIMDILVFHSSRQSGKN
PCSVDNGGCSHLCLAVPASNGSQNYTCSCPTHYKLDRDGKTCRAPTSFLLFSQKSEVSRL
VEDASECPTLILPIHSMRNVRAIDYDPVDQLVYWVDGRGPTLRRAHHNGTQSEVFVSNAM
EKIYPYDIAVEPFTRVLFWSCARNNVINITKLDGTQVGGIIGHEGEDQPRSLAVHSVLGL
LFFINMVSPPLIEQAHIDGLHRRKIITEGLTSPSALAVDAQDNFLFWADTTTKRIETATI
LGEDRKVLVDKKLEQPVGLAVHEDFLYWVDRELTQVERVNKFTGQQREKLQGRIYYLSDI
IAVTPVLSQKMKVHPCHNGSECSHLCLERDQQQRCACPEGKTLADDLKTCINPPSCQPEE
FRCHSGSADCIPLKWRCDGQAECEDKSDEFNCPLPMCQSQFRCKNSQCIDKSEVCDGKRQ
CSDGTDEVGCCDEGQVMCVSTGRCVDTAVHCAGGRRPCPDNPDHALCSTWVIDPPDVNGT
ASKAPYIVGVVVSVVVLVCVAALVVYYRRRPSLLDDHELEPHPKPPQPRSYNIVVTSWGK
SYTSVPGEPPPRDPHMPIGVGGSSAPGICRGIINRGAIARGMFDPAPVTGASSSSSSMTH
YPRETLNPPPTPVAENRGRNQETHCCCNSHQIPTSTLHSYRHYKTRNRPPPPTPCSTDVC
DSDVYSSAVSPRRSHCYTPGSTTYYSSPPMTDYDSDPHPPPPTPQMQYMCDFTSCPPTSS
CPPSPSTERSYCARAPCPPPPSPIASD
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacacactggatcccactactggccattatcgcttgtctagctcacactcagggt
tacccagagttgctgtttgccaaccgcaaagatattcgcattatagaagttggaaaagag
aggcagtcacgccaagttattaaagatgttacagatgcagcatctgtggattactactac
aaggggcagctggtttgttggaccgacattgacaatgaggtcatcaagtgcgtacaggtc
aacaagatcggtggagggacaaagggacataaagaggtgacagtaatatcaaggggaatt
atatcacctgatggcttggcaattgactggctgagtgagaagctatattggaccgactct
gacaccaacaaaattgaggttgcgggattgtacaccaaacatcgatgtgttcttttctgg
caggaccttgatcaacctagagctattgctcttgttcctgctgaagggctgatgttttgg
agtgattggggcgaaaatcccaagattgagaaagctggtatgaatggcgactcctccaca
agacaagtcattgttcaagatgaaatattttggcccaatggtctgacggtggattacgaa
cagcgggttatatactgggcagatgccaagctcaactatattgcttcagtggattttgat
ggcaagagaagaacaaaggtggtccagagcaagttgcctcatccgtttgctttgacgtac
ttcaaccacaccttatactggacagactgggagacgagagctatacactactgcagcgtt
ggtcagaggagaagttgtgacaagcagcaacaacttgggacaaacctctccccaatgtac
atccatgtttatgaccctgcacggcagcttcacgtcaacactccgtgccagaacaacaat
ggaggatgcagtcacctgtgtttagcagctccaacgcctcataacttcacttgtgcgtgt
cccacgggagtgaagctcattgacgagttcaactgttccaatggaccagaagagatgctg
atactggctcgtcgaacagatttgcgccgcatatctctggacactccagatcacacggct
gttgtcattcctgtgctgggcgttaaacatgcaattgctgtcgatattgatcccattgac
agcttcatttactggactgatgatgaaacactccgcattcatcgtgctaaattagatgga
tcggaacaagaggtgatagtgtctgctgaagtagtccatccagatggtattgctgtagat
tggattgcacgcaacttatactggacagatgcagggcccgaccggattgaggtcgcaaga
ctcaacggaacttccagaaagattcttattgctgataaccttgatgagccaagagccatt
gcgatagaccctgatggtgggctcatgttctggacagattggggtacaaatccaaagata
gaacgcgcagccctcgatggctctatgcgacaggtcataattaattcaggccttgggtgg
cccaatggtgttgcaattgattcagagctgagaaaaatatattggtgcgatgccaaggaa
gacaaaatcgagatggcagctctggacggcagtgagagaagggtggttctgagtgagcat
cttccacacgtgtttggcttctctctcttgggcgactttttgtactggactgactggcag
aggaggagcatagagagagtcaacaagtttgatgcgacgcagcgcgaggtgatcgtggag
cagctgccagatcttatggggctcaaggcagtgaacgtgagcaataaggctgggttcaat
ccttgtcgcaagaacaatggtggctgctctcacctctgtcttaatagacccaccaactac
acctgtggctgtcctattggttatgaactcactcagaatgagaaggagtgcgttgttcct
gaagcctttctgctgtacacgaggaaggaggacatcagacgcatctccctcctcaccagc
cataacgttcccatccctgtcaccggcatccagcaggccatgtccattgactttgacagt
gttgataatcgactgtactggacggatatcagggtgaagtccatctctcgtgcctttatg
aatggctcccaaatggagcctgttatagagcttggactttcttttcctgaaggcatggct
gttgattggctagctcgcaacatttattgggcagacatgggaaacaacaggattgaagtt
gcaagattaaatggaacatctagacgagttcttctgtggcagaacatcgctagtcccaaa
tctctggcacttgatccgggtcagggctacatgtactggtcagaatggggagatgagcca
agcatatcgcatgcccatctggacgcctcgcagccatctccaattgtcacaaagatgggc
cgtgcaaatggcctcactatcgacttcaaagatagtcgcctgtactggacagatattgac
aatttcttgatagaaagcagtgatttaaatggacgtaacagggaggtggttgttagagat
ttgccgcagccctacggtctgacgctgtacgaggattatgtttattgggctgactggaag
actggtactatagagcgtgcaaacaaaagcaaaggtgaaaacagaacaagaatacagggt
cagcttgattttattatggatattctggtgttccattcatctcgtcagtcaggaaagaat
ccgtgctcggtggataatggtggctgttcccacttgtgtctggcagtgccagcctctaat
ggttcccagaattatacgtgttcttgcccgacccactacaagctagacagggatggcaag
acttgcagagcaccaacatctttcttgttgttcagtcaaaagtctgaagttagccgtctt
gtagaggatgccagcgagtgcccaacactcatactccccattcacagcatgcgtaatgtg
cgtgctattgactacgatccagtagatcaattggtgtactgggtagatggccgtggaccc
accctacgtcgtgctcaccacaatggcacgcagagtgaggtatttgtgagcaatgccatg
gagaagatttatccctacgatatagctgtggaacctttcactagagtcctcttttggtct
tgtgcaagaaacaatgtgataaacataaccaagcttgatggaacacaggtcggtggcatc
attggccatgaaggggaggaccagccacgttcactggcagtccactcggtgcttggtctg
ctattctttataaacatggtgtcccctccactaattgagcaagctcacatagacggcttg
caccgtcgtaagatcatcacggagggtctcacgtctccttcagctctagctgtcgatgct
caggacaattttttgttttgggcagatacaaccacaaaacggattgaaactgcaacaatc
ttaggagaggacaggaaggtgttggtggacaagaagctagagcagcccgtgggtctggct
gtgcacgaggacttcctctactgggtggaccgggagttaacccaggttgaacgcgtcaac
aagtttacaggacagcagagagaaaaattacaagggcgaatatactacctttctgacatc
attgctgtaacacccgtcctctctcagaagatgaaagtgcacccatgtcacaatggaagc
gagtgtagtcacctgtgccttgaaagagatcagcaacagcggtgtgcatgccccgaaggc
aagaccctagcagacgacttgaagacgtgtatcaaccctccaagttgccaacccgaagaa
tttcgctgccactcgggatctgccgattgcattccacttaaatggagatgtgatgggcag
gccgagtgtgaagacaagagtgacgaattcaactgtcccttaccgatgtgtcagtcgcag
tttcgctgtaaaaacagtcaatgcattgataaatctgaggtttgtgatggcaagaggcaa
tgcagtgatggaactgatgaggtaggatgctgtgatgaagggcaagttatgtgcgtttca
acaggacgatgtgtggatactgctgtacactgtgccggaggtcgtcgtccttgtcccgat
aaccctgatcatgctctgtgttccacctgggttatagatcctccagatgtaaatggaaca
gctagtaaagctccatatattgtgggtgttgtggtatcagttgtagtgctagtgtgcgtg
gctgcattagtggtatattaccgaaggaggccatcactcttggacgatcatgaattggaa
cctcatcccaagcctccccagccgagatcatataatattgtggtgacttcctggggtaaa
agctacacatcagtaccgggtgaacctccgccgagagatccccatatgcccattggtgtt
ggtggttcgtcggcacctgggatatgcagaggcattattaatagaggtgcaatagctcga
ggaatgtttgatcctgcaccagtaacgggagcatcatcatcgtcctcttccatgactcat
taccccagagaaacactgaatcctccgcctactcccgtagcagagaacagaggtcggaat
caggaaacccactgttgttgtaattcacatcaaataccgacgtcgactctccactcgtat
cggcactacaagacccgtaacaggcctccccctcccaccccttgctctacagatgtttgt
gattcagatgtttattcgtcagcagtgtcaccacgtagaagccattgttacactccaggc
tctaccacctactactcctctccacccatgacagactatgattcagatcctcaccctcct
cctcctactccacagatgcagtatatgtgtgacttcacttcatgccccccaacctcctcc
tgccctccctctccatccaccgagcgttcgtactgtgctcgtgccccctgtcctcctccg
ccttcaccgatagcatctgactga
DBGET
integrated database retrieval system
