Procambarus clarkii (red swamp crayfish): 123772083
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Entry
123772083 CDS
T07930
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123772083
03015 mRNA surveillance pathway
123772083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123772083
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123772083
mRNA cycle factors
P-body specific factors
123772083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
123772083
NCBI-ProteinID:
XP_045620960
LinkDB
All DBs
Position
69:20733135..20772070
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AA seq
1269 aa
AA seq
DB search
MEGGKGERRGGKSWRKEREERERKRTNSRSVGYPSKDAEEKEDSVKERQAFETQRQEEIE
KKKAEEDRKKKEEEAAAAQAKQEEEELEQKREEEETRRREEEEMKKQEEDRTFLLAYIQE
AEERLIKKAELRIQNLAMAKDRPELNTAILDSSLKKNTAFIKKLKNLTESQHDSLIRDLQ
SLNLTKYVSEVAQAVVEAKLKMSDINTAVHLCSLLHQRYHDFASTLLENWHKVLSPKKEE
KNSNMSKLRVDLRLYAELIAAGIFAPKEGLPLLGNVLTTLVTSDKEEHQNISVLLTFCRH
CGEDYMGLVPRKIRLLADQFQMAVPKSDFLPRERQKNVRTLIKDYFLSLTKHLFYDHKEL
QQVEQQNRRLLQTRGELSPDRINLADNLSTGLSKLLTNAQQMAELLDEDLPELPEDKSQG
DDLGLCDMGMGEGGEIPEGGTAVLWEDDDTRAFYENFPELKALIPSILYSDSEKPTAVPA
EEITTEEVDETLEEEELEVMETNEEDTEEVLPPELPPEEEQDDSLTGTGPSSNKVLLDAF
LTALPNCINRDLIDNSAMDFCLRFNTKPSRKKLVRALFLVPRTRLDLLPFYSRLVATLQP
LMPDLATDLVNMLRQDFKYQVRKKDQINIESKIKVVRFIGELVKFRVFPRTEALLCLRML
LQDFNHHHIEMACNLLETCGRFLYRIPDSHHRTKIYLEQMMRKKTVKAFDPRYNTMIENA
YFYVNPPDSGPETTKKERPPIHQYIRKLLYNDLCKSNTEKILRQMRKMHWEDPPTSGYIV
KCLTAVWNAKFYNIRCIANLVAGLVSHHDWVGPAVVDGILEEIRLGLEVNHPKYNQRRVA
AVKYLGELYNYRVIESTIIFKVLYLFCSFGVVFDPNMYSEYDPPEHLFRLRLVCTLLETC
GQFFSSGSSKRRLDCFLVYFQHYYQYKKSLSIWNEENEFPWQIEHLVRDTISAVRPKLQL
CTSLEEAYKAVQHLNNQIVAKAIEQVPSLRQLLQPEEDSEALHTITEEAGDSSQVLELEG
DILEDMEDDEEFEEVEGDLDWSESHGDSLTPSQHSQPGRNTMEEEGEGVLTGDAEEELVD
DDDGELTEGELLDGDMKVNVKHVDCEEDTDFMSAFDRMMADSLIERATTVPRPGQLDISV
PVHVKSTAKKTYDQLLCESTEEESKPVVNFVLMTRSGNKQQYNSVEMPVDSELVTKLRTR
EEAERAEKEKVKRMTLEINERQEEEEAAEIMQQTQRPATMNFNRDRRPKYQHPKGAPDAD
LIFGPKKIR
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaaagggagagagacgaggtggaaagagctggaggaaggaacgagaagaa
cgggagaggaagcgcaccaacagcagaagtgtggggtacccttctaaagatgctgaggag
aaggaagattctgtaaaggagagacaagcatttgagacccagagacaagaagaaattgaa
aaaaagaaagcagaagaagacagaaaaaagaaagaggaagaagcagcagcagctcaagcc
aaacaagaagaggaagaactggaacagaagagggaagaggaagaaaccagaagacgcgag
gaagaagaaatgaagaagcaggaagaggatcgtactttccttctggcttatatccaagag
gctgaggagaggctgatcaagaaggctgaacttagaatacagaatttggcaatggcaaaa
gatcgaccagaactgaacactgctatcctagactcaagcttgaagaagaacacggcattc
attaagaaactgaaaaacttgacagaaagccagcatgattccctgataagagaccttcaa
agtcttaacttaacaaagtatgtaagcgaggttgcccaggcagtggtcgaagcaaagctg
aagatgtcggacatcaatactgcagttcacctgtgctctctccttcaccagcgataccat
gactttgcttcaactttgttggagaattggcacaaggtcctctctccgaaaaaagaggaa
aaaaacagtaacatgagtaagctacgagtggatctccggctgtatgctgaacttattgct
gctggcatatttgcaccgaaggaaggtcttcctcttttagggaatgtattaacaacattg
gttacatcggacaaggaggagcatcagaacatttcagtgttgcttaccttctgccgacat
tgtggggaagactacatggggttggtgccgaggaaaattagactccttgcagaccagttc
cagatggctgtacccaaaagtgactttcttcctcgtgagagacagaagaatgttagaacc
ctgattaaagattatttcctctcccttacaaaacatctgttctatgatcacaaggaactg
cagcaggttgagcagcaaaaccgtcggctattgcagactcgaggagagctgagccctgat
cgtatcaacttggctgacaacctctctactggactaagcaaacttctaaccaatgcccag
cagatggctgagctgcttgatgaagacttgcctgagcttccagaagacaaatctcaagga
gatgatctaggtttgtgtgatatgggaatgggcgagggtggagagataccagaaggaggg
acagccgtgctctgggaggatgacgatactagagcattttatgaaaacttccccgagctc
aaagctcttatcccttccatcttgtacagtgattctgagaaacccacagctgtacctgct
gaagaaattacaacagaagaagtagatgagactttagaggaggaagagctggaagttatg
gaaacaaatgaagaagacactgaagaagtgttgccgcccgagttaccaccagaggaggaa
caagatgacagcttgactggcacaggaccatcttctaataaggtgttactagatgccttc
ctcactgctcttcccaactgcatcaacagagacctgattgacaattctgcaatggatttc
tgtctcagatttaacactaagccaagcaggaaaaaattagttagagctttgtttctggtg
ccaaggacaagactagatttacttccattttattcacgtcttgtggccacactccagcct
ctgatgcccgacctggccactgatctagtcaacatgttgcgacaggactttaagtatcaa
gtacggaaaaaggatcagataaacatagagtcaaagatcaaggttgtgcggttcattggt
gaactagtcaagtttagagtcttccctcgcactgaggcgctcttgtgtttacgcatgttg
ctacaggacttcaatcatcaccatattgaaatggcatgcaaccttttggagacctgtggc
cgctttctctatagaattccagattctcaccatcgcactaagatctatcttgagcagatg
atgagaaaaaagactgtaaaagcctttgatcccaggtacaacacaatgattgaaaatgca
tacttctatgtaaacccaccagactctggcccagagactaccaaaaaagagcgcccacct
attcaccagtacatacgcaaacttctctacaatgacctttgcaagtccaatacagagaaa
attttgagacaaatgcggaagatgcactgggaagatccacccacttctggctacattgtg
aaatgtctgacagcagtctggaatgccaaattttacaatattcgttgtattgcgaacctg
gtggcgggcctcgtctctcaccatgattgggtgggtccagctgttgtggatggcattttg
gaagagattcgccttggtttagaggtgaatcaccccaagtataatcagcgacgtgttgct
gctgtgaagtacctaggagagctctacaattaccgtgtaattgaaagcactattatattt
aaggtcctctatttgttctgttcgtttggagtagtttttgacccgaacatgtatagcgag
tacgatccgccagaacacctgtttcgcttgcgtttggtatgtacacttctggaaacttgt
gggcagttcttcagctctggctccagtaagcgacgtcttgattgctttcttgtgtatttt
caacattactatcagtataaaaagagtctgagcatttggaatgaagaaaatgaatttccc
tggcaaattgagcaccttgtgcgggacactatctctgcggtgaggcccaagctacagctc
tgtacctccctggaggaagcctacaaggctgtccagcatctcaataatcagattgttgcc
aaggcaattgaacaagtaccaagcttacggcaactcctccagccagaagaggatagcgaa
gccctgcacaccatcacagaagaggcaggtgacagtagtcaagttttggagctggagggg
gacatcctagaagatatggaagatgatgaagaatttgaagaagtggaaggcgacttggat
tggagtgaatctcacggagattctctcactccttcccagcacagccagcctgggcgcaac
actatggaggaggaaggtgaaggtgtgctgactggagatgcagaagaagaactagtagat
gatgatgatggagaattaaccgagggagaattactagacggggacatgaaggttaatgtt
aaacatgtcgactgtgaggaggacacagacttcatgtcggcctttgatcgcatgatggcc
gacagccttatagagcgtgcgaccaccgtacctcgtcctggccagctagatatatctgta
cctgttcacgtcaaatccaccgccaaaaaaacttacgatcagctgctgtgtgagagtaca
gaggaagagagcaagcctgttgtgaactttgtcttgatgacacgctctggcaacaagcaa
cagtataacagtgtggagatgccagtggattctgagctggtcactaagctccgaactcgt
gaagaggcggagagagccgagaaagaaaaagttaagcgcatgacactagaaataaatgaa
cgtcaggaggaagaggaggcagcagaaattatgcaacagacacagcggccagccaccatg
aactttaaccgtgatagacgaccaaaatatcaacacccaaaaggtgcccctgatgcagac
cttatatttggacctaagaagattagatga
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