Procambarus clarkii (red swamp crayfish): 123772174
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Entry
123772174 CDS
T07930
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123772174
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123772174
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123772174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
zf-C2H2_DHX34
HA2_C
UBZ_FAAP20
nSTAND3
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
123772174
NCBI-ProteinID:
XP_045621174
LinkDB
All DBs
Position
14:6396983..6404601
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AA seq
1322 aa
AA seq
DB search
MGHSKRERSSSRSPHWETKRKRMKQKHKKHKRKKTCKEKVSRLQERSSVRSSSSASSSSS
DSEPRSLAQSEELYKSRVESCDQSKSTSPPRANFSRARLNDMLESESLPRQSSRGGVRPR
DLSQSKSPRHLTTKGSRSMSPCKTSFGECKVTAERVKSHKFEIPKSDLHPSTLNSQMYPQ
TSLTLQKRSSSSESDADSEDELMFDWENHRYELNQMFFRDEDIIKRGSEEYFDFWKFLKK
YHGLQKQKKIREMCTSNHTKDSSEGRSISLVYQLPLQYDKRYNINFALNFKDIDDLRRRL
PPQDLEDGKKRLSMKKLVEIKFIILLYLDFMQKQRFEKLKKLRSSQANLPIADYKEEIIS
TVQKNNIVIIAGDTGCGKSTQVPQYLLAAGFLNIACTQPRRIACISLSKRVAYETLNEFG
SKVGYQIRFEKNKTEHTRIVFLTEGLLLRQVSVDSSLSLYDVIILDEIHERHLDTDFLLG
VMKCLLMQRENIKIVLMSATINIDLFRNYFLGKAPVIQVPGRLYPITLQYFPIPSIEIAS
KREKINPAPYVRILQLIDSKYPDDERGDLLIFLSGMSEISTVVEAVKTYALQTNRWIVLT
LHSTLSVSEQEKVFDVPPEGVRKCIVSTNIAETSITIDGVRFVVDSGKVKEMSYDSQSKM
RKLKEFWISQASAEQRKGRAGRTGPGTCFRLYSEQEYNSFSQYSTPEIQRVPLDSLVLQM
ISMGLPNIRLFPFIEPPAIESLENSLYSLKAQAAVSEAEGLTTIGKLLSQLPMDVSLGKM
LIMGSLFHQVELVLSLSAAMSVQSPFTNRAHRDPECLASIKNLESDHGDPFTLLASYREW
LCVKQEGHENSRKWCRRRGLEEQRFYEMTKLRHQFAQLLHDSGLQDIAGCSRAHLTSAER
AQRSGQLRQLRELKRELHKDRPRTAKVLKVSQGESIASDEDDSRTDIKDVDFRIKNDQKQ
LQEIYRNSTIRSYKDMTVLKIILCSGLYPNVAIADEHNNYKPGSEQLFHTASKPFAVLHP
NSVFASNPEVLQVTDSDLVELPGFTSRHPASTKHQLLAYVSLLETNKPYLVDTLRVPAAQ
VLLLFAHNLDSNADLTVIACDNFIELKFPDAMSAQNLVFQAVQLRQKWKHLLDLRIQATT
PAIENQDRLITEANTLEKDLMAGLVDFFVTETIYSQRRLLAADIKVLHKGPGPGDCILSG
NPFSDDGNDICLLNDIKGGVDLTPFLTYNCLLDTECMVTTITSYDTVCPYCDKEFHLTTL
ERLGHMAQCLKGAMQSSKAVEDMTEDRNDGDPTKKKYECDICNRTLWLNIKGIFKHKKSH
LA
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgggtcattccaaaagagaaaggtcttcatcaagatctcctcattgggagacaaaaagg
aagaggatgaaacaaaaacataagaagcacaagagaaaaaaaacttgtaaagaaaaagta
tctagattgcaagaaagaagttctgtaagaagttcaagctcggcaagcagctctagttca
gattcagagccaagatcactggcacaatcagaggaattatacaaaagtagagtcgagtct
tgtgatcaatcaaaatctacatctccacctagggcaaatttcagtagagcaagactgaat
gatatgttagaatctgagtctctgcctaggcagagttcaagaggcggagtaaggccaagg
gatctgtcacagtccaaatccccaagacatttgactacaaaaggatcaaggtccatgtct
ccatgtaaaacttcctttggtgaatgtaaggtaacggcagagagagtgaagtctcataag
tttgaaatccctaaatcagacttacatccttcaacattaaacagtcaaatgtacccacaa
acatccttgacactacagaaaagaagctcgagcagtgaaagtgatgcagattcagaagat
gagctcatgtttgattgggagaaccatcgctacgaacttaatcagatgtttttcagagat
gaagatattattaaaagaggaagtgaggaatattttgacttttggaagtttcttaaaaaa
tatcatgggctgcagaaacaaaaaaagattcgagagatgtgcactagcaaccatactaaa
gacagtagtgaagggaggagcattagtttagtttatcagttaccacttcaatatgacaaa
aggtacaatataaattttgcccttaattttaaagatattgatgacttacgaaggagactg
cctccacaagatttagaagatggcaagaagcgactctccatgaagaagcttgttgaaatt
aaatttattattttactttatctagacttcatgcagaagcaaagatttgaaaagttaaaa
aagttgcgcagttcacaggctaatctccctattgcagattacaaagaagagataatttct
acagttcagaaaaacaatattgtgataattgctggtgacactggctgtggtaagtctaca
caggttccccagtacttactcgcggctggttttttgaacattgcttgtacacagccacga
cgcattgcctgcatatctctgtcaaagcgagttgcttatgaaaccctaaatgaatttggc
tcaaaagttggctatcaaataaggtttgagaaaaacaaaacggagcatacgaggatagtt
tttctgacagagggtcttcttttgagacaggtgtcagtagatagttcactctctctgtat
gatgtaataattctagatgaaattcatgaacgtcaccttgacacagacttcttactaggg
gtcatgaaatgtttgttaatgcagcgggaaaatattaaaattgtgttgatgagtgctacc
atcaatattgacctctttcgaaattattttttgggcaaagcccctgtaattcaagtacca
ggcagattgtacccaatcacactgcagtattttccaattccatccatagagatagccagt
aaaagagagaaaattaatcctgcaccatatgtacgaattcttcaattgatagatagcaaa
tatccggatgatgaaagaggtgacttgttgatctttctgagtggcatgagtgagatatca
acagttgtagaagcagtcaagacttatgctttgcagacaaacagatggattgtcttgact
ctgcatagtaccttgtctgtttctgagcaagaaaaggtttttgatgttcctccagaaggc
gttcggaaatgcatagtttctacaaatattgctgaaacgtcaattactattgatggtgtt
cgatttgttgttgactctggtaaagttaaggaaatgagctatgattctcagtctaagatg
aggaaattaaaagagttttggataagtcaggcttcagcagagcaaaggaaaggaagagct
ggtcgtacaggcccaggaacctgttttcgtttgtactccgaacaggaatataattcattt
tcccagtatagtactccagagatacagcgagttccattggattctcttgtccttcagatg
atttcaatgggattgccgaatattagactcttcccatttattgaacctccagctatagag
agtttagaaaattccttatactctctaaaggctcaagcggctgtttcagaagcagagggg
ttgactaccattggtaaactcctctctcagctacccatggatgtgagtcttggcaagatg
ctgattatgggctctctcttccaccaggtagaactagttctctcactctcagcagccatg
agtgtacagagtcctttcactaaccgagcacatcgagatcctgaatgtttagcctcaatt
aagaaccttgagtctgatcatggggaccccttcacccttctggcctcttacagggaatgg
ttgtgtgtcaaacaagagggccatgaaaactctcggaagtggtgtagaagacgaggatta
gaggaacagcgcttttatgaaatgacaaagttgcggcatcaatttgctcaactgctacat
gattcaggacttcaagatatagctggctgttctcgtgcccatttgacaagtgcagaacgt
gctcagaggagtggtcagttgagacagcttcgcgaattgaagagggaattgcacaaggat
agacctcggacggctaaggtgctcaaagtgtctcaaggagagagcattgcaagtgatgag
gatgacagtcgaactgacattaaggatgttgacttcaggatcaagaatgatcagaaacag
ttgcaggagatataccgaaactctacaatacgatcttataaggacatgactgtgctgaag
atcatcctttgtagtggactgtacccaaatgtggcaatagctgatgaacataataattac
aagccaggatcagaacagctctttcacacagcctcgaagccatttgcagttctacaccca
aacagcgtttttgcaagcaacccagaagtgctccaggtcacagactcggacttggtagag
ttgcctgggttcacatcgagacaccctgccagcaccaagcaccagctgctggcttatgta
tccctattggagacaaacaagccataccttgttgataccttgagggttccagctgctcaa
gtgttgctactttttgctcacaatttggacagtaatgctgatttaactgtaatagcatgt
gataactttattgaacttaaattcccagatgctatgtcagctcagaatcttgtgtttcaa
gcagtacaacttcgtcaaaagtggaaacatttactcgatcttagaatacaggccacaaca
cctgccattgaaaaccaagacagactcataacagaagcaaatacattagagaaagatctc
atggctggattagttgactttttcgtaacggagacaatttactcgcagcgtcgtcttctt
gctgcagacataaaagttctccacaagggtccaggaccaggtgattgtatcttgagtgga
aatccatttagtgatgatggcaatgatatatgtctgctgaatgatattaaaggaggagtt
gatttgacaccgttcctaacttacaattgcttgctcgatactgaatgtatggttactacc
atcacttcatacgataccgtgtgcccatattgtgacaaagagttccatctgacgacactt
gagcgtttagggcacatggcacagtgtttgaaaggtgccatgcagtcttcaaaagcagtt
gaagacatgactgaagataggaatgatggtgatcctacaaagaaaaagtatgagtgtgac
atttgtaacaggactttgtggttgaatattaagggtatttttaagcacaagaaatcacac
ttggcctga
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