Procambarus clarkii (red swamp crayfish): 123772397
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Entry
123772397 CDS
T07930
Symbol
LanB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123772397 (LanB1)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_II
Motif
Other DBs
NCBI-GeneID:
123772397
NCBI-ProteinID:
XP_069181951
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All DBs
Position
17:38472724..38615514
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AA seq
2221 aa
AA seq
DB search
MKFIHLYGLCLLLLLAVVCSGGSDDHPEGLSSVDHNQVEAAKDFADVGEGVLTDEGVLAD
EGVLSEDGLQPRQSGRTRTKTYRTSSSSTRVIRPGDAEAEYDPQRQGGVVYGRSYVPSTI
RRGKGRGRSRPTSSSSSSSSSTSVTGSGGVTRETVSHTHGSPGVHTTTYTSLYPESAVTG
HTHDAGSWSTSDSSPSHRSSSRRVSSTSRSHSRSEGRRVEGAEEEEEETPSIVDESYFNQ
RHGQTEDGQDFFRWNGQEYTGVGRSGSSVSHRVNTTRTTTTHTHPGQSTTYTYTYPGGSS
VTTYRNTTTYTSHIPGYSTSESQRGSISTGSSRTSSTRYGTSYNRHYDSLGGASSSSTSS
SVSGGDVSRGSEVGFGESYHRNTEEDQLTLEYEEEDYDERFARGPVISEADRTHPFVVLG
LGSTSGYGQRSSHPCDQSSCYPATGNLLIGREKSLSATSTCGLYRRERYCIVSHLKDRKK
CFWCDSRPQWDGSPQYSHKIDNIVYRFDPRTRRRSWWQSENGLEDSSIQLNLEAEFHFTH
LIITFRTFRPAAMLFERSFDFGKTWKVYRYFAYDCAEAFPGIHQGPPTSINDVVCESRYS
AVEPSTEGEVIFRVLPPNIEIDNPYSDEVQNLLKITNLRVNFTKLHTLGDQLLDNRREIK
EKYYYAIYDMVVRGSCSCYGHASRCLPLPGVEDRADMVHGRCECTHNTKGLNCENCEDFF
NDLPWRPAVGKESNACKKCNCNNHASLCHFDPQVYEDTGRISGGVCDDCSHNTQGRNCEE
CIPFYYQDPNRDIREPEICQPCNCDTRGSIDNAICDSRTDISGGLLAGRCHCKVYVDGLK
CDRCKAGYWNFSAENPEGCQAVTEDYYSQPKSEWPQKSCSCDILGTINNLGCNVLTGECS
CKRFVTGRDCNQCLPQHYGLSEHPDGCQPCSCDRGGALDNNCDVISGQCKCRPHVSGRRC
DVPEEGYYVATLNYLTYEAELARGSELYCEEASLYDFRKSSGNNCQVVMREPYRDGRVTS
WTGLGFMRVFDNSYLEFEIENIETNMEYDLVIRYEPQFRGEWENVVVTIERPEPIDPNGP
CGNSRPIDDQMRLSLPDSQRQVTVFPPVCLEAGKRYKIRIDFSRSNARTDSPSASILVDS
IMLIPRAEKLPFYSGSLENDDLRYEYERYRCSESFYEGQNLATVPEVCTDNHFGSIGFYV
YGQAFSCQCDGTGSYSSICSSLGGQCECKPNVVGRRCDRCAPGTYGFGPEGCKACDCSPV
GALDNFCDQQTGHCKCRPNTYGRQCGECQPGFWNFPNCQRCECNGHADTCDSYSGICHEC
RDNTTGPNCALCIGGFYGDPRLDVGIACRRCPCPGTEDSGHSFAARCSLDPRTKDVICEC
EEGYAGSRCDVCAGNYFGNPEIPGGSCRPCNCNNNIDISRPGNCNARTGECEQCLFNSYG
FYCERCQPGFYGDALNQQCRECVCNILGTNQSIGVCDHETGQCPCLPKVLGLECDHCAPN
HWKIASGEGCEPCACDVVGSYSDQCNEQYRQGFGHRNYFDGVCECRPGFGGRQCNLCQAN
FYGNPRIECLACNCNFEGSETLQCDHETGQCKCLEGIGGDKCDECARGFTGRAPHCQPCG
ECFDNWDFILTELKDRTQALIAAAGQIKQSGATGAYSHEFESMEEKINDVRDILLSANMT
SQSLVSLEDLIQELRANLTNAAAELQGLEGGVDNTTQRISLATNALADLRLQAEELRNQA
GDLKEKATKLQEANVEGALNLTRYAGERSRAAQERVDFTQVIVSESERNRRRIENLLLHA
GDRFNRTQDENEAKLSGLSDMLDDMDEGMPDLNEQVCDRRGDPCDTYCGGAGCGKCGGLS
CNDGLVNTAELALKFADDAEETLKKKEASADELLRGVSGAKRQSDIAFDLAKMAFEMTFQ
ARNMTDSHRAAISKLLEEIEEYFNVPGAKPKEIRVLAEEVLALDISLRPEQITDLAERIT
LTIDSLTNIDAIIDATRNDLDIAVQLKERADQAKKKAVDALNVSERVLEALEEAGAAQSA
AEEAVLKASDDIHATQTHLTQIASETSVAQAKANSSLKEVQDLESRVEKVKIQYKINQRH
LEDTTNAVSQAALKAQRAANDAKQLEDKYLTVAERLQLKAEAAEQARIRAEELKTRANKL
ASEAFAKLATLKEMEGVFQNNENILENHEEQIRLMEVSMIEYHEYILQKTEFYATCDSGT
R
NT seq
6666 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatacacttatatggattgtgtttactattacttttggcagtagtgtgttca
ggtgggagcgacgaccacccggaaggcctctcatcggtcgaccacaatcaagttgaagca
gcaaaagacttcgcggatgtcggggaaggtgtcttaactgacgagggtgtattagctgac
gagggtgtattgtctgaagacggtctacagccgcgccagtcaggcaggacccgcaccaag
acctaccgtacctcctcctccagcaccagggtcatacgaccaggggatgcggaggccgag
tacgaccctcagcggcagggcggcgtcgtctacggtcgttcctacgttccgtctaccatc
agacggggcaagggccgaggccgctcccgtccaacttcttcctcctcctcctcttcttcc
tccacctcggtgacgggctcgggcggggtgacccgggagacagtgagccacacccatggc
agccctggcgtccacaccaccacctacactagcctgtacccagagtccgccgttaccggc
cacacccacgacgctggctcctggtctacctctgactcttctccctctcatcgctcctcc
tctaggcgtgtgtcctcaacctcgaggtcgcattcacgaagcgagggtaggagggtagaa
ggggcagaagaggaggaggaggagacgccgtccattgtggacgagtcgtacttcaaccag
cgtcatgggcagaccgaagacggccaagacttctttcgctggaacgggcaggaatatacg
ggcgtcggccgctccgggtcgtctgtctcgcatcgcgttaataccaccaggaccaccact
acccacacacatccaggtcaatccaccacctacacatacacttaccccgggggctcgagc
gtcaccacgtacaggaacaccaccacatacacctcccatatcccaggatattccacgtcg
gagagccagaggggctccatcagcactgggtcctctagaacatccagcacacgctacggg
acctcgtacaaccgtcactacgactcccttggcggcgcctcctctagttctacgtcgtcg
tccgtcagtggcggcgacgtcagcaggggaagcgaggtgggttttggcgagagttaccac
aggaacacggaggaggaccagctgactctggagtacgaagaggaggactacgacgagcgg
ttcgcccgtggtcccgtcatctctgaagcggaccggacgcaccccttcgtggtactaggg
ctgggctccacctcaggttatggtcagcgatcatcccacccttgtgaccagagctcctgc
tacccagccactggcaacctattaataggtcgggagaagagcctctctgccacctccacc
tgtggcctctacaggagggagcggtactgcatagtgtctcatctgaaggaccgcaagaag
tgcttctggtgtgactcacggccgcagtgggatggcagcccccagtattctcacaagatc
gataatatcgtttatagatttgaccctcggactagaaggcgttcgtggtggcagagtgaa
aatggtttggaagacagtagcatccaactgaacctggaggctgagtttcattttactcat
cttatcatcacattcagaacctttagacctgctgctatgctctttgagagatcttttgac
tttggaaagacatggaaggtgtacagatactttgcctacgactgtgctgaagcttttcca
ggaatccatcagggtcctccaacctctattaatgatgtagtttgtgaatctcgctattca
gctgttgaaccatccacagagggtgaagtaatattcagagttctaccgccaaacattgaa
atagacaacccatacagtgatgaggttcaaaacctgctaaaaattacaaatcttcgtgtc
aacttcaccaaacttcacactcttggtgatcagcttttagacaataggcgtgaaattaag
gaaaaatattattatgctatctatgatatggtggtgagaggatcatgttcatgctatggg
catgcatcacgctgtttaccactgccaggtgtagaagatcgagcagatatggtacatggg
cgctgtgaatgcacgcataatactaaaggtcttaactgtgaaaattgtgaagactttttt
aatgatttaccttggagacctgctgttggaaaggaatccaatgcttgtaaaaaatgtaac
tgcaacaatcatgcatcattgtgtcattttgatccacaagtttatgaggatacaggtcga
atctctgggggtgtgtgtgatgattgttcgcacaacactcaaggtcgtaactgtgaagag
tgcataccattctattatcaggaccctaacagagacatacgggaacctgagatatgccag
ccctgcaactgtgatacccgtggttcaattgacaatgccatatgtgattctcgcactgat
atttctggtggcctacttgctggcaggtgccactgtaaagtatatgttgatggcctgaag
tgtgaccgctgtaaggctggctactggaacttctcggctgaaaacccagagggatgtcag
gcagtcacagaagattattattctcaaccaaaatcagaatggcctcagaaatcctgctca
tgtgatatcctgggaactattaataatttgggctgcaatgtcctgacgggcgaatgttcc
tgtaagcgttttgttactggtcgagactgtaaccaatgcttgcctcaacattatggcctc
tcagagcacccagatggctgccagccatgtagttgtgatagaggtggtgcactcgacaat
aactgtgatgttatcagtggtcaatgcaagtgtcgcccacatgtctctggtcgtcgatgt
gacgtccctgaagaaggttactatgtggcaacattgaactaccttacttatgaagctgaa
cttgcacggggttctgagctttattgtgaggaggcgagtctgtatgacttcagaaaatcc
agtggaaataattgtcaagttgtgatgagggaaccatatcgtgatggacgagtgaccagc
tggacgggcctgggcttcatgagagtgtttgacaattcctaccttgagtttgagattgaa
aacattgaaacaaacatggaatatgaccttgtcattcgctacgaacctcagtttcgtggg
gaatgggaaaatgttgtggtgaccatcgaacgtccagagcctattgatccaaatggaccc
tgtggaaatagccgaccaatagatgaccagatgagacttagtctaccagacagtcagcgg
caagtaacagtattcccacctgtgtgtttagaggctggaaagcggtacaaaatacgaatt
gactttagtcgatcaaatgctcgaacagattctccctctgcatccatccttgttgactct
atcatgctgattccaagggctgaaaaattgccattttattctggctctttagaaaatgat
gatcttcgctatgaatatgagcgatatcgctgcagtgaaagcttctatgaagggcaaaat
cttgccacagtccctgaagtctgcacagataaccactttggcagcattggcttctatgta
tatggacaggctttctcatgtcagtgtgatggcacaggcagctacagcagcatctgcagt
tcgctaggtggtcagtgcgaatgcaaacctaatgttgtcgggcgtagatgtgatcgttgt
gcaccaggtacttacgggtttggtcctgaaggatgtaaagcctgtgattgcagtcctgtt
ggagctttagacaacttttgtgatcagcagacaggtcattgtaaatgtcggccaaataca
tatggtcgccagtgtggcgagtgtcaacctggattttggaacttccctaattgtcagcga
tgtgagtgcaatggccatgccgacacatgtgactcctactcgggtatctgtcatgagtgt
cgtgacaatacaactggaccaaactgtgctctgtgtattggaggtttttatggtgatcca
cgtctggatgtgggcattgcttgtagacggtgcccatgtcctggtacagaagactctggt
cacagttttgctgctcgttgctcccttgaccctcgaaccaaagatgttatatgtgaatgt
gaagaaggttatgcaggatcccgctgtgatgtgtgtgcaggtaactactttggtaatcca
gagataccaggtggtagttgtcggccttgtaactgcaacaataacattgatatttctcgg
cctggaaattgtaatgcacgtactggggagtgtgagcagtgtcttttcaactcttatgga
ttctactgtgaacgctgccaaccaggattttatggtgatgctctcaaccagcaatgcaga
gaatgtgtgtgcaatatcctgggcaccaatcagtccattggtgtatgtgatcatgagaca
gggcagtgtccatgtctccctaaagtactaggactggaatgtgatcactgtgctcccaat
cactggaagattgcttctggtgaaggttgtgagccatgtgcctgcgatgttgttggatca
tactctgatcagtgcaatgagcaatatagacagggctttggtcatagaaattattttgat
ggggtatgcgagtgtcgtccaggatttggtggccgccaatgcaacctgtgccaggccaac
ttctacggaaatcctcggatagaatgtttagcatgcaattgcaactttgaaggctcagag
actcttcagtgtgaccatgaaactggacagtgcaaatgtctggaaggcattggtggggac
aagtgtgatgaatgtgcacgagggtttactggacgagcacctcattgtcaaccgtgcgga
gagtgttttgacaactgggatttcatacttacagaactgaaagaccgtacacaagcccta
attgctgcagctggacagatcaagcaatcgggagcaactggcgcatatagtcatgagttt
gagtcaatggaagaaaagattaacgatgtaagagatatcttgctatcagctaacatgact
tcacagagtttagtctctctcgaggatctcattcaagaactcagagcaaatttaacaaat
gctgctgctgagctccagggtctagaaggaggagtggataacaccacacagcgcatctct
ctagctaccaatgctttagctgatctccgtctacaggcagaagagctaaggaatcaagcc
ggtgacctgaaggaaaaggcaactaaactacaagaggccaatgttgaaggagcactgaat
ttgactcggtatgctggagagaggtcacgtgctgcacaagagcgagttgacttcacacag
gttattgtgtctgaatctgagcgtaatcgcaggaggattgaaaatctccttttgcatgcg
ggtgatcggtttaaccgcacacaagatgaaaatgaagcaaagttgtctggacttagtgat
atgttggatgatatggatgagggaatgccggatcttaatgaacaggtgtgtgaccgacga
ggtgatccatgtgacacctactgtgggggtgctggctgtggcaagtgtggtggactctct
tgcaatgatggtttagtcaacactgctgaacttgctctcaagtttgctgatgatgcagaa
gaaacgctaaagaaaaaagaagcatcggcagatgagcttttgagaggtgtttcgggtgcc
aaacgtcagtctgacattgcttttgaccttgctaaaatggcatttgagatgactttccag
gctcgcaatatgactgactctcatagagcagcaatctctaagctccttgaagaaattgaa
gagtacttcaatgtaccaggagctaaacccaaggaaattagagtgctagctgaagaggtg
ttagctctggatatttccctaagaccagagcagattacagaccttgctgaaagaattacc
cttaccattgattctctaacaaatattgatgccattattgatgctaccagaaatgatctg
gacattgctgtacaacttaaagagcgtgctgaccaggccaagaagaaggctgtagatgca
ttaaatgtgtcggagcgtgtattggaggctttggaggaagctggtgctgctcagagtgct
gcagaagaagccgtcttgaaagctagtgatgatatacacgccacacagacgcacctcaca
cagattgcaagtgagactagtgtagcgcaggccaaagcaaattcatctcttaaagaagtg
caagatttagaaagtcgcgttgaaaaggtgaagattcagtacaagatcaaccaacgacat
cttgaagacacaacaaatgctgttagtcaagcagcacttaaagcccagcgtgcagcaaat
gatgctaagcaacttgaagataaatacctgacagtagcagaaaggttacagttaaaagct
gaagcagcagaacaagcaagaattagagcagaagaacttaaaacgagagcaaataaacta
gcatcggaggcatttgcaaaattagccactcttaaagaaatggaaggagtcttccagaac
aatgaaaatatacttgaaaaccatgaggaacaaatccgattaatggaagtgagcatgata
gaatatcatgaatatatattgcagaagacagaattttatgccacatgtgattctggaact
cgctga
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