Procambarus clarkii (red swamp crayfish): 123772468
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Entry
123772468 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K22266
NACHT, LRR and PYD domains-containing protein 10
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123772468
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcla04054
]
123772468
Membrane trafficking [BR:
pcla04131
]
Autophagy
Other autophagy associated proteins
Others
123772468
Pattern recognition receptors [BR:
pcla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
123772468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NPHP3_N
AAA_22
AAA_16
NB-ARC
AAA
nSTAND3
Viral_helicase1
CC_BshC
HEPN_Swt1
AAA_18
nSTAND1
Peptidase_M16_C
Motif
Other DBs
NCBI-GeneID:
123772468
NCBI-ProteinID:
XP_069181985
LinkDB
All DBs
Position
17:complement(40898191..40908646)
Genome browser
AA seq
1009 aa
AA seq
DB search
MMSPASLNPHQGYSAQDINFGRLFKAATQTSKRLLKEVFVIMMNRSHVSATDKYPITVAD
YCFNVLLWSNAKYRENFNAEERLLMEQDLSSADFDVSLLTKMIHKLFSFMTFPEPFSSAI
RDLKHIRNRVCHKYSLVDNTQLRANFDDLKIIFVRLLNEAADFLSIEIRDLRNIFLHEAD
EILYSTVMTEASNYLENLEQFRGDLVGRFIIKSRPEVMEQYSKLKSLNPFTWLSDEQFPD
LLVDKIFTPLQINEQSRIIEVDSLLATKLLSLETQETSGILPSVLVLSGIAGCGKTSLCR
YLLHNWSARLGVITALRAIDLIIHIELRNVTCNTLVSHLRRSLLNKTCKSFEEKDIIEIL
QEINVLFIIDGMDEATTDGRQLVNEVLSVIGNSRVIITTRPEFTLSVVQVAERYHLSHME
LYVHGFSEQGMTKFTSNVFISLEANEKKRRQQECGFLKMLQTSGKNLGDHLKLPLTLAML
ICLWRDDEARLSHVTSATRLYYEIFRMCTSKMISRLQARTSLHPMELEAFAEEWLMKLGK
EAFEMLDNREFLISHDRRRVLASFCSERHIDSIQVFSAFLVCEVNNSMKGTQYHFSFIHK
SQMEYLAAFYLARELKLKGESAVQRIISVLENLKLHKLSMQVNRMLAQTLNSSMLSSMKA
HSWSNTLMFTIGHLCRIKASDLVIYEVTKIVLGLCSHSYSPTSLCQISLEPQCHPLSSFW
QVAVESNCHPLVCKMIYHVSNTKIMWRPSAEALYDPAHSLFQLLHHTNFRLHGVLIRIIT
SIFSINVLEENGLVDMKSYENLVPLLSYLASQPSTKVALRLDQQYYSWGDPETADDLLTT
LLPKGNLTAVMCHLGALGAAALACVRKIGKICIRVSDLSTLIVVRNSLSTIRRNVDHVTL
RLDIPPTVLPSSLPTFKQPLVLSIILREVDDSHVDWASEAITRLSTSYKDIDLVASRLTP
SGGEAFLKALRNKQVNILDQLTIRSTHRLEESHYQEMSQMIQCHFSWWY
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccccagcctccctcaaccctcatcaggggtacagtgctcaagatatcaacttt
ggacgtttgttcaaggctgccacacaaaccagcaagcgactcttgaaggaagtgtttgtg
atcatgatgaacagatcccacgtgagtgccacagacaagtatccaataaccgtagctgac
tactgcttcaatgtcctcctgtggtccaatgccaagtatcgggaaaatttcaatgctgaa
gaaagactgctaatggagcaagatctgtcctcagcagattttgatgtttctctcctcacc
aagatgatccacaagctattttcctttatgactttcccagaaccgttctcaagtgcaata
cgagacctcaaacacataagaaacagagtgtgtcataaatattcgctggttgacaatact
caactccgcgctaactttgacgacctcaagataatttttgttagactattaaacgaagca
gcagactttttaagcatcgaaattagagatctacgaaatattttcctacatgaagcagat
gagattttatattcgacggtaatgacagaggcttccaactatttagagaatcttgaacaa
tttcgaggtgatcttgttggtcggttcatcataaagtcgaggccggaggtgatggaacaa
tactctaaactgaagagtttaaatccctttacctggctgagtgatgaacagtttccagac
cttctggtggataagatcttcactcctctccaaattaatgaacagagcagaattattgaa
gtggattcgcttcttgctacaaaattgttgagtcttgaaacacaggagacttcaggaata
ctcccatctgtcctggtcctctctggcatagcaggctgtggcaagacgtccctctgccgg
tacttgctacacaactggagtgccagacttggtgttatcactgcacttagagccatcgac
ctcatcatccatattgaactcaggaatgtgacgtgtaacacactcgtatcgcatctgcga
agaagtttgctcaacaaaacttgcaagagttttgaagaaaaagacattattgaaatcttg
caggaaattaatgtcttgtttattattgatgggatggatgaggcgacgacagatggcagg
cagctggtaaatgaggtgctgtcagtaattggtaattcccgggttatcataactactcgt
cccgagttcaccttgagtgttgttcaagtagcagagaggtaccatctctcccacatggaa
ctctacgttcacggcttttctgagcaaggaatgaccaagtttacatcaaacgtcttcatc
tctcttgaagcaaacgagaagaaacgtcgccagcaagagtgtgggtttctgaagatgctg
cagacaagtggcaaaaatcttggggaccacctcaagctgcctcttacgctggcgatgctc
atctgcctctggcgagatgacgaagccagactgtctcacgttacttctgcaacaagactt
tattatgaaattttcaggatgtgcacctcgaagatgatctcccggcttcaggcaagaacg
tcgctccaccccatggagttggaggccttcgcggaggagtggctaatgaagttaggaaaa
gaagcattcgagatgctggataatcgtgaatttcttataagtcatgacagacgtagagtt
cttgcctccttctgttctgagcgccatattgacagcattcaggttttttcagcatttctt
gtgtgtgaagtaaataatagcatgaagggaacacagtaccactttagttttatacacaaa
agccaaatggagtatttagctgcattctatcttgctagagagttaaagttgaagggagaa
tctgcagttcaaaggatcattagtgtactggagaatcttaagttacacaaactaagcatg
caagtaaacagaatgctagcacaaacgttgaactcgagtatgctgtcatccatgaaagca
cattcttggagcaacacactaatgtttactataggtcatctgtgtaggatcaaggcctca
gatttagtcatttatgaagtaacgaaaattgtgctcgggttatgctcacattcatacagc
ccaacatcactttgtcaaatttccttggaacctcaatgtcaccctctatcatcattctgg
caggttgccgtggagtctaactgccatcctctggtctgtaagatgatttatcatgtatca
aataccaaaatcatgtggcgtccaagtgctgaagcactttatgatcctgcacactctctt
ttccagttgcttcatcatacaaatttcagacttcatggagttctaattaggatcataact
agtatcttttccataaatgtcttggaagagaatggactcgttgacatgaagagctacgaa
aacttggtgcccctcctttcgtatctcgccagccagccatccaccaaggttgccctgaga
ctggaccaacagtactacagctggggcgacccagaaactgccgacgaccttctgacaact
cttcttccaaaaggaaacctcacagcagttatgtgtcatctgggagctcttggtgctgct
gctttggcctgtgtcaggaagattggcaaaatttgtatcagggtgtctgatctctcaact
ctgattgttgtaagaaactctttgtctaccatcagaagaaatgtggatcatgtgacactg
cgcctagacattccgccaacagtgttaccatcgtccctgccgactttcaagcagcctctg
gtactaagcatcatcctgagagaagtggacgattcccatgttgattgggccagtgaagcc
ataactcgcctcagcacatcttacaaggacattgacctcgtggcatctcgtctcacgccc
tcaggaggagaagcattcctcaaggcgctaagaaataaacaagtgaatatcttggatcaa
ctaacgatacgctccactcacaggcttgaggagagtcactaccaggaaatgtctcaaatg
atccagtgtcacttttcttggtggtactga
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