Procambarus clarkii (red swamp crayfish): 123772677
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Entry
123772677 CDS
T07930
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123772677
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123772677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
Motif
Other DBs
NCBI-GeneID:
123772677
NCBI-ProteinID:
XP_045621917
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Position
LG70:13003006..13118273
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AA seq
816 aa
AA seq
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MWQCGTGRCVPLSWHCDEEPDCEDGSDEVNCPNGIECKADEFTCHNSGNKSNCIPLNWVC
DGASDCDDQSDEVSCNATCTSEQFTCASGMCISKRWHCDGDNDCGGDDHSDETNCPNSTC
TYSQMQCGDGECIEKSWRCDGEDDCLNGTDEHDCPNTTCSADEYPCAGGFQCIRREWLCD
GDTDCPEGDDERDETCTHQCPDDSFMCGDKSCIASKLKCNGFSECSDESDEVNCAPACKE
ESEFNCGNHCIPMELVCNGNDDCGNAADEPIDNTCGRNECEDRNGGCAQICVDTRAGHYC
KCKAGFMLVNGTQCEDIDECMEPGICSQVCVNLKGGFKCECVDGYARDPHNHHRCKAMEG
HASLLFAHFTDIRKISLDHQEITAIVNETQGATALDFVFKTGMIFWTDVREKCIYKAPID
EGSKKVVVISDDVTTVDGLAVDWLYNHIYWTNTDTDTIEVADFNGDMRKTLFQHHLDEPR
AIAVYPSEGWMFWTDWGQQAKIESAGMDGKFRQVIVSKDIRWPNSLSIDLVLRKIYWSDS
KYHTIYSCDFDGSNRRVILHSTDYLPHPFSITVFEDTMYWSDWRNEAIFRANKFTGQDVI
SIAHSHATPMTVHVYHSYRQPNGTNHCTPLNGLCTHLCLPAPQRTAQASKISCACPDGLM
LMSDGLTCESEDDSDPTSGEPILESSQITNRLADEVSSTMAPEMKQVPAQVESPSEGEDG
NVAVAAILAALGVLCIASAMAYMIYRYFRKRSVHSMNFDNPVYKKTTTEDGFYLAGQQRT
NCQRASAEPQYQHRQYGVMSPEDSLEPLTHGSNNFV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagtgtgggacggggaggtgcgtccccctctcttggcactgtgatgaggagccc
gactgtgaggatggatcagatgaggtcaactgccctaatggtatagaatgcaaagcagac
gaattcacttgtcacaatagtggcaacaaatcgaattgcatcccgctaaactgggtttgt
gatggagcttccgactgtgatgatcaatccgacgaagtttcttgtaatgctacctgcact
tcggaacagttcacgtgtgcatctggaatgtgcatttcaaaacgatggcattgtgacgga
gacaatgactgtggaggagatgaccactcggacgaaacaaattgtccgaatagtacctgt
acatattcacagatgcagtgcggagatggggaatgtatagagaaatcttggagatgtgat
ggggaagacgattgtctcaacgggacagatgaacatgattgtccgaataccacttgcagt
gctgatgagtatccgtgtgcaggagggttccagtgtatccgccgggagtggttatgtgat
ggagatacggactgtcccgaaggagatgatgaacgggatgagacctgtacccatcaatgc
ccagatgattccttcatgtgtggggacaagtcgtgtattgcttcaaaattaaaatgcaat
ggattctctgaatgctctgatgagtcggatgaagtgaattgtgcaccagcttgcaaagaa
gaatctgaatttaattgtggaaaccattgcattcctatggagctggtttgcaatggtaac
gatgattgtgggaacgcagccgatgaacctatagataacacgtgtggcaggaacgagtgc
gaagatcgaaatggtggctgtgcccaaatttgtgtcgacactcgggctggacactactgc
aagtgtaaagcaggtttcatgctcgtaaatggaacgcagtgcgaagatattgatgagtgc
atggaacctggtatttgctctcaggtctgtgtcaacctcaaaggtggcttcaagtgtgaa
tgtgtcgacggttacgcccgtgacccacacaaccatcatcgatgtaaagctatggagggc
cacgcgtcacttctgtttgcacatttcaccgatattcggaaaatatcccttgatcaccag
gagattacagcaattgtgaatgagacacaaggggctacagctttagattttgtatttaag
acgggaatgatcttctggacagatgtccgggaaaaatgtatttacaaagcccccatagat
gaaggcagcaaaaaggtggtagtcatctctgatgacgtaacgacagtcgatggtctggct
gtcgattggctgtacaatcatatctactggaccaacacagacacagataccattgaggtt
gccgatttcaatggggacatgagaaagacactcttccaacaccatctagatgagcctcgt
gccattgctgtgtacccttcggagggttggatgttctggacagactgggggcagcaggct
aagattgagagtgctggcatggatggtaaatttcgacaggtcattgtctctaaagatatt
agatggcccaattcactcagcattgacttggttctgagaaagatatattggtcagattcc
aagtaccacaccatctactcgtgcgactttgatggttctaaccgcagggtgatacttcac
tcgacagattatctgccccacccattctcaatcacagtatttgaagacacaatgtactgg
agtgattggcgtaatgaagcaatattccgagccaacaaattcactggacaggatgttata
tctatcgctcactcgcatgcgaccccaatgactgtccacgtgtatcatagctataggcaa
cccaatggcacaaatcactgtactccgctcaatggtctttgcactcacttgtgtctccct
gcacctcaaaggactgctcaagcttccaaaatttcatgtgcttgtccagacggcctcatg
ctgatgtccgatggacttacatgcgagagcgaggatgactcagaccccacctcaggggag
cccattctggaatcttcccagataaccaatagactcgcagacgaagtaagcagcaccatg
gcaccagagatgaagcaagtcccggcgcaggttgaaagtccaagtgagggggaggatggc
aatgtagcagtggcagctatcctggctgcattaggtgtcctttgcatcgcttcagctatg
gcgtacatgatttaccgctacttccgcaaacgctcggtgcacagcatgaattttgacaat
cccgtttataaaaagacgacgactgaggatggcttctacctggcagggcagcagcggaca
aactgccaaagggcatcagctgagccccagtatcaacaccggcagtatggagttatgtct
ccagaggattcacttgagcctttgacacatggcagcaacaactttgtatga
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