Procambarus clarkii (red swamp crayfish): 123772875
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Entry
123772875 CDS
T07930
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123772875
09122 Translation
03013 Nucleocytoplasmic transport
123772875
03015 mRNA surveillance pathway
123772875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123772875
03041 Spliceosome [BR:
pcla03041
]
123772875
03009 Ribosome biogenesis [BR:
pcla03009
]
123772875
03012 Translation factors [BR:
pcla03012
]
123772875
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123772875
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123772875
mRNA cycle factors
Stress granule specific factors
123772875
Spliceosome [BR:
pcla03041
]
Complex C
Other components
EJC/TREX
123772875
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
90S particles
Helicases
123772875
Translation factors [BR:
pcla03012
]
Eukaryotic type
Initiation factors
eIF-4
123772875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
TniB
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
123772875
NCBI-ProteinID:
XP_045622204
LinkDB
All DBs
Position
12:complement(14199960..14214875)
Genome browser
AA seq
402 aa
AA seq
DB search
MAEGRVRRVIPEDLSNVEFETSEEVQVVPTFDSMGLREDLLRGIYAYGFEKPSAIQQRAI
RPIIKGRDVIAQAQSGTGKTATFSISILQILDINVRETQVLTLSPTRELAVQIQKVVLAL
GDYMSVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRTLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggacgagtgcgacgcgttattcccgaagatctttccaatgtcgagtttgag
acgagcgaggaggtgcaggtggtgcccaccttcgactccatgggcctcagggaggacctg
ctcagaggaatctacgcctacggatttgagaaaccgtcggccattcaacaacgtgctatt
cgtccaatcataaaggggcgtgatgttatagctcaggctcaatctggcactggtaaaacg
gctacgttctcgatatccatccttcagattttggacataaatgttcgcgagacccaggtc
ctcacgctgtctccaactagggagttggctgttcagattcagaaagttgtacttgcactt
ggggactacatgagtgtgcagtgtcatgcgtgtatcggaggaacgaaccttggggaagat
attcgcaagctggactacgggcagcacgtagtgtctggtactcccggcagagtgtttgac
atgatcagacgtcgcacactcagaacacgatctataaagatgttggtcttggatgaagca
gatgagatgctaaataaagggtttaaggaacagatttatgatgtataccgctaccttcct
cctgctactcaagttgtcctcatctctgccacgttgcctcacgaaattttggaaatgact
tcaaagttcatgacggaccccatccgcattcttgtaaagcgtgatgaattgacactagaa
ggtattaagcagttctttgttgcagtcgaacgtgaagaatggaagtttgatacactgtgt
gacttgtatgacacactcaccattacacaggctgttatcttctgtaacacaaagcgtaag
gtggactggctgacagagaagatgagagaagccaatttcacagtatcatctatgcatggc
gatatgccacagaaagagcgcgatgccattatgaaagaattccgttcgggtcagtctcgt
gtcctcatcactactgacatctgggcaagaggaattgatgtacagcaggtttctttggtg
attaactacgatttgcccaataatcgtgagttgtacatccatcgtattggtcgttctggg
agattcggccgtaaaggtgttgctatcaactttgtcaagaatgacgacattcgtattttg
cgagacattgaacagtactattctacacagattgatgaaatgcccatgaatgttgctgat
ctgatataa
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