KEGG   Procambarus clarkii (red swamp crayfish): 123773086
Entry
123773086         CDS       T07930                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla03020  RNA polymerase
pcla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123773086
  09124 Replication and repair
   03420 Nucleotide excision repair
    123773086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcla03021]
    123773086
   03400 DNA repair and recombination proteins [BR:pcla03400]
    123773086
Transcription machinery [BR:pcla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123773086
DNA repair and recombination proteins [BR:pcla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123773086
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom DZR Lar_restr_allev CpXC SR1P
Other DBs
NCBI-GeneID: 123773086
NCBI-ProteinID: XP_045622535
LinkDB
Position
81:complement(8470654..8473300)
AA seq 128 aa
MSLRAKGAAEGSGFIGIRFCQECNNMLYPREDKENKILLYACRNCDYKMRAENNCIYVNK
LMHEIDELRHINPEVVQDPTLPRTDDHPCPRCNTREAVFFQAQTRRAEDEMRLYYVCCNT
ECTHRWTE
NT seq 387 nt   +upstreamnt  +downstreamnt
atgagtctaagggccaaaggcgcggctgaagggtcaggtttcattggaattagattttgt
caagagtgcaataacatgttatatcctcgagaagacaaggagaacaagatattgctgtat
gcttgccgaaactgtgattacaagatgcgagcagaaaataattgcatttacgtaaataag
ctcatgcacgagatcgacgaactgcgtcacattaatccagaagttgtacaggacccgaca
ctgcctcgcactgacgaccatccttgccctcgatgtaatacacgtgaggcagtattcttt
caagcacaaaccaggagagctgaagatgagatgagactgtattatgtgtgttgcaacact
gagtgtacacaccgctggacggagtga

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