Procambarus clarkii (red swamp crayfish): 123773126
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Entry
123773126 CDS
T07930
Name
(RefSeq) laminin subunit alpha-1-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04512
ECM-receptor interaction
pcla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123773126
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123773126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_2
Laminin_G_1
Laminin_N
Laminin_B
Laminin_I
Laminin_II
Motif
Other DBs
NCBI-GeneID:
123773126
NCBI-ProteinID:
XP_045622577
LinkDB
All DBs
Position
LG72:8692819..8964765
Genome browser
AA seq
3236 aa
AA seq
DB search
MFSLLFGTLALWVTCSALDRPEEGIGDAINGEKGVFPQVINLATRAHITANATCGQDGPE
VYCKLTDHSGNRAPQCGVCDARSPDPARHHPVTNAIDGTNSWWQSPSLAVGSRYRWVTIT
LDLKQVYQVAYVIVKSAVSPRPGNWILERSLDGRLFYPWQYYALSDQECLAAYNYPPTRG
RPSYDYDTHVICTSYFSKLDPLEGGEIHTSLVNGRPGSAGPSEALRKFTEARFVRLRLQR
IRTLHGELQGRSSQSDASVTKRYFYSIKDISIGGRCVCNGHAMNCDTDDQQARCSCVHNT
CGNNCNMCCPLYNQKPWRAGNFSDGGVCEKCQCYGHADSCKYDEEVARKHLSLNTRDEYE
GGGVCQECRNHTDGVNCERCQPGFYRPQGVAPDAPTPCLPCECSGPGATGHCVQDDSQFN
LGFFPGACICKEGFHGPRCSRCDKGYRRYPVCEPCPCDRSGSLNHDCDGECICKANVVGD
RCETCAQGHFHLDARNPTGCTPCYCNAATNSCEAARLAVYTVLQHSNWHVTDLARRRVVA
ASQEGKNVRIAHDDMAAYGSYYWLAPDDYLGRRTTSYGQTLSIKVSWIKLRGDTSGQPTR
CPDVILEGAGYRIAYGDKTYRRGKSALLEIPFYEHEWFHFSKDITDIGLDTKPKEFRGGL
VTRREMMEILSSLQTLMIRARFHTVQIEGVLHNVILEFGAEGTAALVTGAVERCHCPTGY
RGLSCESCEPGYRRVNNTVYGGVCQLCDCNGHVESCNPFTGVCGECQHNTVGENCERCAA
GYFGDASSGTPDACHACECPLALGSNHFTPRCVPDLDLGGYKCQCPSGYAGPKCERCAEG
YYGNPLLPGNYCQPCVCNGNIDLRERDSCDRQTGQCLKCIGNTVGWHCEKCKPSYYGDAK
RGHCLGCGCHEQGSVSAQCDSDSGQCQCKKLYTGRQCDRCISGHGGVDERCPPCQCNPEG
SVSQICDPFIGQCPCKPGVAGRSCDECVPDHYGTLKTGCKRCGCDERGSGSSSCDIVTGQ
CPCKSNVDGRTCSTCKPGHWGHVSGSGCLECHCDKRGSISPQCEDATGQCRCRPGVGGTR
CDTCLPGYWGFSRQGCKPCDPCGSPGRFCDPNSGRCICPANTEGDRCERCSPGSWDYHAS
RGCKPCNCSGAGAESRQCDSRTGHCVCNEGYEGEHCGKCKFGYFGFPVCGPCSCNMAGTN
PHNCDSKGRCQCGDDGQCPCKSNVVGHRCGKCVGGTFGLSVNNPSGCTGCYCFRRTNKCI
QADLTWSQLRMWGRRVLTVKYRKPVAGERPFRPPIVVVRPWNTQEICYINLALPGERGLN
FGDGETRLNITNQLHVIPGTEGDVTIDSSLLFDAPLYWQLPREFMRDKVRSYNGYLRFRV
QSEGGNKIFPEHILQSYPLVSLQGNWQLVLEYFPPSISPDGRYEVKLHEDYWRLKNKPQK
VTREMMMIALQNIQHILIRATHAADAATASVHDVTLDVAAEGSPVSSRVALGVEQCFCPA
NYTGTSCQNPNIGYYRWHKNNYIQSTIIIDLVGESRQCRCNGRSETCDAETGICKNCRDN
TMGNHCDVCVTGYYGQPAAGRCKPCACPSLEQNFAETCQADRYAGYICHCRTGYTSAKCD
RCDYGYYGRPSQHGGYCRPCGCDPFGSVHEGCDQDGVCTCKKGITGKDCSQCAPRHVTSA
TGCKSCEDGCVNMLLDEVEEMIRAATSINVTGYIPAPWPMLKEIQNVTRILRYQLDRYHS
NVDASQKLVVGFDLDYYARDLLRRAEQVEVATREIYPPTAKIKLEAKTVLELLTSLYTQI
DETIAYLKNYAIGETPSISIGGAMLEAEKILKIIQKRNFTKFDIGAEIELSKAKILLDRI
VKMDQKTPVIEALQIRIKDIDSKLKELLQRIKAANSKTDEAGSLNESNRKRLSRVKEYST
EIKNTRQMVDDQNFNSTQLLKEANKNLINIRINYDELAKMLIDLRNGSNYLEEFEGVLWR
LNIEYKDKYVQRAHDHAMELMRESIRLESLFNKTRDVADGPLRAAKAYQRIVDALLSAEE
AAKNASLAAETAYIVAYPGDPEESLVRRAILSFQKSNELHSKGEKSKKTLGQLYVELDSQ
RSALGTARGILDVTDDRLNALNTLLKTQLSSSISSDIRESLERTRTTHANVQRTLDHVNT
IHMNLTIIRERAQELNRIDASLLNEIRDKISTGESHTMKGVRLANNLRKTVDRIENRGNE
LRERIEALKRKIKQTRQYASSIRVSLTTNSSGICTRKYRPSLQPSTTTSIMLSYAISSSE
RNALLMYLGSHNSSDFMAVEMVNRKVEFSWDAGGGVQRISHPLRLLTNTPQVTDDTRWYH
ITINRIGNIGQLSVTPANIEGNIFEAETTVSDASPPGFSMMDLLPTDVLWIGGVPQRAQN
LVKTQMFAGCLHTLSIDGEYIGLWNFTESEGCGACNEGEELILKADEIALGFNGKGYFKG
TNRIRRPKEYYNTVLAFKTLDEDALLFLAVNEAKNQFFSIALDNGHVVFTVQFDPQTRLV
MKSSKQLNNNDDMVQIQAIVQNKDRDGARMGRLVVGDQDQLGTVKGGPDLDLSYVPYYFG
GVDPEFNKQRWGSELILRSLLGCMTGLSVLDEGKNPLTDGQYYGVEQSCSEKPLNDVGFL
GQGYVELESHVLKRDSNFGFTFQTMEADALLMVSTFIGQDNETDGDMTTPTTTTTTTTTI
PTPLQPGEEHPPDYYSVSLVEGHLDIRLNGGTGSHRIMSSAKYNDGYLHSFFVIKENRRV
TLKVDDKEVNGTRLDRGSQVVSGPDTGGLYFGGVPETIDAVTMVGSSRALKGCIRDVIVN
NRVVSFSRPVRFKDVYIGRCADLPPTAMQGMEGDMKEINSCQPPTQHTVEYKALKFGDQI
ESYVMVPMNPRTFKKNFNVSFEFRTYYPNGLFFIASNIRKKKTQTISAQLRNGRVIISLK
KPSKKGPKDIEAVSNPGLNTGQWRKVTIEKVRKRLHLFIDNQLVKKVKAPRKMNIGRELF
LGSLPANLVDPDSTQETETLRGCLRNLKINGEDFEIPNSRRRDRIVGVGQCFASVQPGSY
FPGDAYAIYSDDFNVGSLLELRLEFRTWELNGIILSVADLRGTSLSLELVNGAVLLSVDM
GTGHAFSARVGLRNKFSFCDNMWHTVKASYIKDSISLRVDDYREAYGFNGSGNGEGALTG
APFYIGGLPDTALPGTLMSRENFKGCIRNIVLNSERRDWTDMYKLQNVLLNACPVQ
NT seq
9711 nt
NT seq
+upstream
nt +downstream
nt
atgttttcccttctctttgggactcttgccttgtgggtcacctgttcagctctggataga
ccagaggaaggcattggagacgcgatcaacggagagaagggcgtgttcccccaagtgatc
aacttggccacacgcgcccacatcacggccaacgccacctgcggccaggatggcccagag
gtgtactgcaagctgacggaccactccgggaaccgcgcgccccagtgtggggtgtgcgac
gcccgctctcccgacccggccaggcatcaccccgtcaccaacgccatcgacggtaccaac
tcctggtggcagtccccgagcctcgctgttggcagcaggtatcgctgggtcaccatcact
ctcgacctcaagcaggtttaccaggtggcctacgtgattgtgaagagcgccgtgtcccca
cgccctggcaactggattctggaacgctcgctggacgggaggttgttctacccctggcag
tactacgcgctcagcgaccaagaatgcctcgcggcgtacaactacccccctacccgcggc
cgaccctcctacgactacgacacacatgtcatatgtacctcctacttctccaagctggat
cccctggagggcggcgagatacacacctcactagtgaacggacgtccgggatccgcagga
ccctctgaggcccttcggaagttcacagaggcacgcttcgtccgtctgcgccttcagcgg
atccggacccttcacggcgagctgcaggggaggtcctcgcagtctgatgcctccgtcacc
aagcgttacttttattctataaaagacatcagtattgggggtcggtgtgtgtgtaatggc
cacgccatgaactgcgacactgatgatcagcaggcaaggtgttcatgcgttcacaacaca
tgtggcaacaactgcaacatgtgttgtccactgtacaaccagaagccatggcgagctggc
aactttagtgatgggggagtgtgcgagaaatgccagtgttatggccatgcagactcttgc
aagtatgatgaagaagttgccaggaagcatctttctcttaatacaagggatgaatacgag
ggaggcggcgtgtgccaagagtgtaggaatcatactgacggtgtcaactgcgaacgctgc
caaccaggattctatagacctcagggtgtggctccggacgctcccacaccatgcttgccc
tgtgagtgttccggacctggagccacgggccactgtgtccaagatgactcccagtttaac
cttggcttcttccctggagcgtgtatctgcaaagaaggattccacgggcctcgctgtagt
cgttgtgacaaaggttaccgtcgttacccagtgtgtgagccctgcccttgtgaccgctca
ggttccctcaaccatgactgtgatggagagtgcatctgtaaggcaaatgtggtgggtgat
cgctgtgagacgtgtgcccaagggcactttcacctggacgcacgaaatccgactggttgc
acaccttgctactgcaacgctgcaacaaactcgtgcgaagcagccagactggctgtctac
actgtcttacagcatagtaactggcatgtgacagacctggcaagaagacgggttgtggcc
gcatctcaggaaggcaagaatgttagaatagcacatgatgatatggctgcctatggttct
tattattggcttgcaccagatgattatcttgggagaaggaccacatcatatggacaaact
ttaagtattaaggtatcttggataaaacttagaggcgatacatcaggccagccaacccgc
tgcccagatgtcatcttggagggtgcgggataccgcattgcttatggtgacaaaacatac
cggcgcgggaagtccgctttgctcgagattcctttttacgaacacgagtggttccatttt
tccaaggacattacagatattgggctagacaccaaacctaaggagttcagaggaggatta
gtaacgcggcgggagatgatggaaattctcagctcgcttcaaactttaatgatcagagcc
agattccatactgtccagattgaaggagttcttcataatgtaatccttgagtttggagct
gaaggcactgcagctcttgtcactggagctgttgaacgctgtcattgtcctacaggatat
agaggactatcatgcgagtcttgtgaaccagggtatagacgagtcaacaacactgtgtac
ggaggagtatgtcaactgtgtgactgtaatggtcatgtggagtcttgtaatcctttcact
ggcgtatgtggggagtgtcaacacaatacagttggtgagaactgtgagcgatgtgccgca
gggtactttggtgatgcatcctcgggtaccccggacgcctgccatgcatgcgagtgtcca
ctggctcttgggtctaatcacttcactccaagatgtgtccctgaccttgaccttggtgga
tacaagtgccagtgtccttcaggctatgctggccctaagtgtgaaaggtgtgcagaaggt
tattatggcaatccacttctccctggcaactattgtcagccatgtgtgtgtaatggcaac
attgatctgcgggaacgagatagttgtgatcgccagactggccagtgtcttaagtgtatt
ggcaacactgttggctggcattgtgaaaagtgcaaaccaagctattatggtgatgctaag
aggggccattgcctgggctgtggatgtcatgagcaaggctctgtatcggcacagtgtgac
tcggacagtggccagtgtcagtgtaaaaagctgtacacaggacgccagtgtgaccgttgc
attagtggtcatggtggtgtggacgagagatgccctccatgtcagtgcaaccctgaagga
tcagtcagtcagatttgtgatccatttattggccagtgtccatgcaagccaggtgttgca
ggacggagttgtgatgaatgtgtgcccgaccactatggtactctgaagactggctgcaag
aggtgcgggtgtgacgagcgagggtcaggcagcagcagttgtgacatcgtgactggccag
tgtccctgtaagagcaacgtggacggccgcacctgctccacctgcaagcctgggcactgg
ggccacgtgtcagggagtgggtgcctggagtgccactgtgacaagagagggagcatcagc
ccccagtgtgaagatgccacggggcagtgtcgctgtcggcccggtgttggcggcacccgc
tgtgatacttgtctgcctggctactggggcttctccagacagggatgcaaaccatgtgat
ccatgtggtagtcctggccgtttttgtgaccctaattctgggcgttgcatttgtccagcc
aacacagaaggtgaccgctgcgagaggtgctctcctggctcctgggattatcatgcttcg
cgaggctgcaagccttgcaactgttcaggagccggagccgagagtcgtcagtgtgactct
cgcactggccattgtgtgtgcaatgaaggttatgaaggtgagcactgtggtaaatgcaag
tttggatactttggattcccagtatgtggcccatgtagctgcaacatggcaggcaccaac
ccacataattgtgatagtaaaggacgatgccagtgtggtgatgatggacagtgcccatgc
aagtctaatgtggtgggccataggtgtggtaagtgtgtgggcgggacatttggcctttcg
gtaaacaatccctctgggtgtaccgggtgctactgcttccgaagaaccaacaaatgcata
caggccgacctcacctggtcacagctgcggatgtggggtcggagggtactgaccgtcaag
taccgaaaacctgtggctggagaacgaccttttcgcccgcccattgtggtagtccgtccc
tggaacacgcaggagatatgctatatcaatttagctcttcctggagaaagaggtttaaac
tttggagatggtgaaacgagactgaacataaccaaccagttgcacgtcatccctggtacc
gagggggatgtaaccattgactcctcactcctgtttgacgctccactttactggcaactg
cctcgggaattcatgagagataaggtcagatcatacaatggctatctgaggttccgtgtt
cagagtgaaggtggcaacaagatctttcccgagcacattcttcagtcgtatccgcttgtg
tccctgcagggcaactggcagctagtgttggagtatttcccaccctccatatctcctgat
ggcagatatgaagtcaaattacatgaagattactggcggttgaagaacaagccacagaag
gttactcgtgaaatgatgatgattgccttgcagaatattcagcacatactcattcgtgct
actcatgctgcagatgcagcaactgcgtctgttcacgatgtgactttggacgttgctgct
gaaggttcgcccgtgtcatctcgggtagccctgggagtagaacagtgcttctgcccagca
aactatacaggaacttcctgtcaaaatcctaatattggatattatcgctggcacaaaaat
aactacattcaatctactattataattgatttggtgggagagtcacgccagtgtcgatgt
aatggacgctctgagacgtgtgatgctgaaactggtatttgtaagaactgccgagacaac
acaatggggaatcactgcgatgtttgtgttactggatattacggtcagcctgctgcaggg
cgatgcaagccctgtgcgtgcccttcactagaacaaaattttgcagaaacttgtcaggct
gatcggtatgccggttacatctgccactgccgcactgggtacaccagtgctaagtgtgac
agatgtgattatggctactatggaaggccatcacagcatggtggatattgtcggccttgt
ggttgtgatccatttggcagtgttcatgaaggatgtgaccaagatggagtgtgcacatgc
aaaaagggaattactggaaaagactgttcccaatgtgcaccaaggcatgtcacctctgca
acaggctgcaaatcatgtgaagatggttgtgtgaatatgctgcttgatgaagtagaagag
atgattagagctgccacctccatcaatgtaactggctatatacctgctccttggcccatg
ctcaaagagattcaaaatgtcaccagaatcctgaggtatcagcttgaccgataccatagt
aatgttgatgcctcgcaaaagcttgtggttggatttgatttagactattatgccagagat
ctcttacgcagggcagagcaggtggaggtggcaacaagagaaatttatccaccaactgca
aagattaaacttgaggcgaagacagttttagaattgctaacaagtctttacacccaaatc
gatgagaccattgcatacctaaagaactatgctattggagagactcctagtatatctatt
ggtggtgccatgctggaagccgagaagattttgaaaattattcaaaagcgcaacttcacc
aagtttgatataggagccgagatagaactgagcaaggctaaaatattgctagaccggata
gtaaaaatggaccaaaaaacccctgtgattgaagcacttcagattcgcataaaggatatt
gacagtaaacttaaagaacttcttcagagaataaaagcagctaatagcaaaacagatgag
gcaggttcactgaatgaaagtaaccgcaaaagactttctcgtgtaaaggagtattcaact
gaaatcaagaacactcgtcaaatggttgatgatcaaaacttcaactcaacccagctgctg
aaagaagctaacaagaaccttattaacatcagaattaattatgatgaacttgccaaaatg
ttaattgatttgagaaatggatccaactatcttgaagaatttgagggtgtcttgtggcga
ctcaacattgaatataaggacaaatatgtccagagagcccatgaccatgcaatggagctt
atgagagaatcgattagattggaaagtctgttcaacaaaacaagagatgttgctgatggg
cctctacgagcagctaaagcctaccagaggattgtggatgctttgctgagtgctgaggag
gctgctaagaatgcctcactggctgctgagactgcctatatagtggcataccctggggat
ccggaagaatcactcgtgcgccgagcaattctgtcgtttcagaaatcaaacgagttacat
tccaaaggtgaaaaatcgaagaagactttagggcaactgtatgtggaattggattctcag
cgtagtgcacttggaactgcaaggggaattctggatgtaactgatgaccgtttgaatgct
ttgaatactcttttaaaaacccagctttcttcaagtatctcctcagatattcgggaatca
ctggagagaactcgaactacccatgccaatgttcagagaactttggaccacgtaaacacg
atacatatgaaccttaccatcattagagagcgtgcacaagaacttaaccgtattgatgcc
tctcttctcaatgaaattagggacaaaatatcgacaggagaaagtcataccatgaaaggg
gttcgcttggcaaataatctccggaagactgttgacagaattgagaatcggggaaatgaa
ttaagagaaaggatcgaggccctcaagaggaaaattaagcagacaagacagtatgcatct
tcaattcgtgtatccctcaccaccaattcttctggaatatgtacaagaaagtatcgaccc
tcgcttcagccatcgacaacaaccagtattatgctcagctatgctatcagtagttcggaa
agaaatgcacttttgatgtaccttggttctcataactcgagtgatttcatggctgtggag
atggtaaatcgtaaagttgaattttcttgggatgctggcgggggagttcaacgcatcagt
cacccgctgcgtctcttgaccaacacgcctcaagttaccgatgacacaagatggtaccac
atcactatcaatcgcattggaaatattggacagctatctgtcacaccggcaaatattgaa
ggcaatatttttgaagcagagacaaccgttagtgatgcttctcctccaggttttagtatg
atggatctgctgcctactgatgttctttggattggtggagttcctcaaagagcacagaac
ctagtgaaaacccaaatgtttgctggttgcctacatactctttcaatagatggggaatat
attggtctgtggaacttcaccgagtctgaaggttgtggagcctgcaatgaaggggaggaa
ttaatattaaaagcagacgaaatagctcttggattcaatggcaagggttacttcaagggt
acaaatagaataagaagaccaaaagaatattacaatacagtcttggctttcaagactctg
gatgaagatgctctcctcttcttagctgttaatgaagccaagaaccagttcttcagtatt
gccttggataatggccatgttgttttcaccgtgcaatttgatcctcaaactcgcctcgtg
atgaaatctagcaagcagctaaacaataatgatgatatggtccagatccaagctattgtg
cagaacaaagaccgagatggtgcacgaatgggtcgacttgttgttggtgaccaagaccag
ttgggaacagtgaagggagggccagaccttgatctttcctatgtaccctattattttggt
ggtgttgatccagaatttaacaaacaaagatggggcagcgagttaattctgcgttcactt
cttggctgtatgacgggactgagtgtgttggatgaaggcaaaaatccacttactgatgga
cagtattatggtgttgagcaatcatgttctgaaaagccattaaatgatgtaggcttcctc
gggcaaggatatgttgaacttgagtcgcatgttcttaagcgtgactcaaactttggattc
acattccaaaccatggaagcagatgccttgttaatggtttctacgttcataggacaggac
aatgaaacagacggagacatgactactccaacaaccaccaccaccaccactaccacaata
cccactcctcttcaaccaggagaggaacaccccccagactactactctgtgtccctagta
gaaggccatctagatatccgtcttaatggaggaaccggcagccacagaattatgtcatca
gcaaagtataacgatggatatttgcattcattctttgtcatcaaagaaaacagaagggta
accctgaaggtggatgataaagaagttaatggaaccaggctggatcgaggaagccaagtt
gtgtcaggaccagacacgggtgggctctactttggaggagttcctgaaacaattgatgct
gtaaccatggttggatcttctagagcattaaaaggctgcatccgagatgtaattgttaat
aatagggtagtgtcattttcacggccagtgaggtttaaagatgtttacattggtcgttgc
gctgatcttccaccaactgctatgcaaggcatggaaggggatatgaaggagataaactcg
tgtcaacccccaacccagcacactgtggaatacaaggcacttaaatttggagaccagatt
gagtcatatgtgatggtacctatgaatcctaggacattcaagaagaatttcaatgtttct
tttgaatttcggacatattatcctaatggactatttttcattgcttcgaatataagaaag
aagaagactcaaacaatatcagctcagctccgtaatggtcgagttatcatctctctgaag
aagcctagtaaaaagggcccaaaggacatagaggcagtttccaatccaggacttaatact
ggtcaatggagaaaagttacaattgagaaagttcggaagcgtcttcatcttttcatagac
aatcagttggtgaagaaagtgaaagctcctcgtaagatgaatattggacgggaattattc
ttgggaagccttccagctaatcttgttgatccagatagcacacaggagacagaaactctc
cgtggctgtctacgaaacctaaaaattaatggagaagactttgaaataccaaacagtagg
agacgggatcgcattgttggtgttgggcagtgctttgccagtgtacagcctggttcatat
ttcccaggagatgcttatgccatatatagtgatgactttaatgttggttcgctgctggaa
ttaagactggaattccgaacttgggagctaaacggtatcattcttagtgttgctgacctt
cgaggaacttcactttctcttgaacttgttaatggagctgttttgctaagtgttgacatg
ggtacgggccatgcttttagtgctcgagtgggacttcgaaacaagttcagcttctgtgat
aacatgtggcacactgttaaagccagctatattaaagactcaatttccttaagagttgat
gattaccgtgaagcatatggatttaatggatctggtaatggtgaaggtgcacttacaggt
gctccattctacattggtgggttaccagatacagcccttcccggaactcttatgtctcgt
gaaaacttcaaaggctgcatccgcaatattgtcctgaacagtgaacgacgtgattggact
gatatgtataaattgcaaaatgttttgctcaatgcttgccctgttcaatga
DBGET
integrated database retrieval system
