Procambarus clarkii (red swamp crayfish): 123773332
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Entry
123773332 CDS
T07930
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04137
Mitophagy - animal
pcla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123773332
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123773332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123773332
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
123773332
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123773332
Multi subunit type E3
ERAD complex
123773332
LMBR1L-GP78-UBAC2 complex
123773332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
G2BR
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING_16
Trm112p
Motif
Other DBs
NCBI-GeneID:
123773332
NCBI-ProteinID:
XP_045622930
LinkDB
All DBs
Position
89:16879646..16900408
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AA seq
665 aa
AA seq
DB search
MPVVLDRLPLPNLTWYSGLSVLLLSCSIYYAGVQVALNPNWKEKLLEKSNASQAEDEVSL
YHVSDHDGTSQERQMTPYLIPEVISFMFHEPLCIWTLINMAYCVLILLGTLIQRLVFGEL
RVSEQQHIKDKFWNFVFYKFIFVFGVMNVQAMDEVVLWCSWFSVLGFLHLLAQLCKDRFE
YLSFSATTPRRTHVRLLGLLGIILTIATFCLLICVVVGCHSGINTFAFMVAECILLVVRT
LHVITRYSIYLWDITHEGLWERRGRYVYMTELVFELSELIIDMVHHIHMLVWGNMFLTMA
SLVICMQLRLLFYQLQHKVKSHRNYLRVLQLVNMYPEISGADILVEESTCAICWEHLESG
RCLPCLHVFHASCLLAWLHQDLSCPTCRHKLHKPEQNDSRSLSGSLLDGLLPTSEESGIG
QENGVRGGRGGAGAFPSPAAPEGSPGIAGWRYVSWLPSFSVEQSHTQLPRHHQANSQPAS
TSQLDSLARQVQQMFPDVSYSRVLEDLRHTHSLEITIDNILEQRLICPPPMFTSDDSPSL
LRENNHKRIKEEEGVREEEEYFQDAEPLPYTRQNMPLALDFLSTTNTCTSEDSSDTESEG
SGYGLGSCDGGSRFSKCPQEREQMLAQRKTALLNQARHRFATRPRVATCKDEEELVEDVK
CLNNS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggtgttggaccgcttgcccctacccaacctgacctggtactctgggctcagt
gttcttctcctctcctgttccatatactatgccggcgtacaagtcgccctcaaccctaac
tggaaggagaagctcttggagaagagcaatgcttcacaagcagaagacgaggtgtcgctt
taccacgtcagcgatcatgatgggacctcacaggagcgccagatgaccccttacctcatc
cccgaagtcatcagtttcatgttccatgaacctctctgtatatggactctcatcaacatg
gcatattgtgttctgattcttttgggcaccctaattcagcgcctcgtgtttggagagctg
cgggtgtcagaacagcaacacataaaagacaagttttggaattttgtcttttataaattc
atcttcgtttttggtgtgatgaacgtccaagcaatggatgaggttgtgctctggtgttct
tggttcagtgtcttgggatttctacaccttctggctcaactttgcaaagatcgctttgaa
tatttatcattctctgcaacaacgccacgcagaacgcacgtgaggctgctcgggctactg
ggcattatcctcaccatagctaccttctgtcttctcatatgtgttgttgttggctgtcac
tcgggcattaatacttttgcatttatggttgctgagtgcatacttttggtagtacgaaca
ctgcatgtgatcacccgctacagtatctacctctgggatatcacgcatgaaggcttgtgg
gaaagacgaggtcgttatgtgtacatgactgagctggtatttgagctgagtgagctgata
atcgacatggttcatcacattcacatgctggtatggggtaatatgttcctgactatggca
tcacttgtcatatgtatgcagctgagacttctcttctatcaacttcagcacaaggtcaag
tctcaccgtaactaccttagggtccttcaactggtgaatatgtacccagaaataagtggt
gctgacatcctggtggaggagagcacatgtgccatttgctgggaacacttggagagtggt
cgctgcctcccgtgtttacatgtctttcatgcgtcatgtttgctggcctggctacaccaa
gatttatcttgcccaacatgtagacataagctacataagcctgaacagaatgattcaagg
tcactatctggttcactgttggatggtcttcttcctacaagtgaagaaagtggcattgga
caggaaaatggagtaagaggtggcagaggaggtgcaggtgctttcccatccccagctgct
ccagaaggatctcctgggatagcaggatggcggtatgtgtcatggctgccaagttttagt
gttgaacagagccacacccagctgcctcgtcaccatcaggccaattcacaaccagcctca
acttctcagttggatagccttgctagacaggtacaacaaatgtttcctgatgtatcatat
tcacgtgttttggaggatcttcgacacactcattctttagaaataacaattgataatatt
ttggagcaacgcttaatctgtccaccaccaatgttcacttctgatgatagtccaagcctg
ttaagagaaaacaatcacaaaagaataaaggaagaggaaggtgtaagggaagaggaagaa
tattttcaagatgctgaaccgctaccttacaccaggcagaacatgccgttagcactggac
ttcttgtctaccacaaacacttgcacttctgaagattctagtgacacagaatcagaaggg
agtggttatggacttggatcatgtgatggtggcagtcgttttagcaagtgcccacaagag
agagagcaaatgttggcccagcgcaagactgctttgctcaaccaggcccgccaccgcttt
gctactagaccaagagtcgccacttgtaaggatgaggaggagttggtggaggatgttaag
tgtttgaataactcctga
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