Procambarus clarkii (red swamp crayfish): 123773582
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Entry
123773582 CDS
T07930
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123773582
03016 Transfer RNA biogenesis [BR:
pcla03016
]
123773582
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123773582
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123773582
Transfer RNA biogenesis [BR:
pcla03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123773582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
123773582
NCBI-ProteinID:
XP_069168536
LinkDB
All DBs
Position
72:complement(7937986..7959556)
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AA seq
407 aa
AA seq
DB search
MKAALDLGTCKSGFGFGGTGKKSNCKQFDDYGESFGLRDVIGCYLNLDAMEMHYSKNGTD
LGKAFTLRSEFKNAVFHPAVVLKNAEMSFNFGATEFKHPPKAGYVAVSQASKDCTVSSGV
KGGGDKPQKLQNNAPHAVIIEPSRELAEQTLKQVQMFRKHLDNPVVRDLLVVGGIPVKEQ
IAALNAGVDIVCGTPGRLEDLINTGQLSLQSCKFFVLDEADGLLKQGHERLINNIYNSIP
KITSEGKRLQMVVCSATIHSFQVKRMAERLMHFPTWVDLKGEDAVPETVHHVVVTIDPRT
NSSWSNLRRHLQTDGVHVKDGVRPGNNTPETLSEAVKLLKGEYCIKAIDTHKMDQALIFC
PTKLDCDNLERYFNQIDSKVVWTPNLVRQVKRAFRIVRRDEDGHNCV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagcattagatcttggaacatgtaaatcgggatttggatttggaggcactgga
aaaaagtctaattgcaagcagtttgacgattatggtgaatcttttggcctcagggatgtc
attggttgctatctcaacctggatgccatggagatgcattacagcaaaaatggcaccgat
ttaggtaaagctttcacattacgaagtgaattcaagaatgctgtcttccatccagctgta
gttttgaagaatgcagagatgtctttcaattttggtgcaacagagttcaagcacccacct
aaagcgggatacgtagcagtgtctcaggccagcaaggactgtactgtgagctcaggtgtg
aagggaggtggagacaagccacaaaagcttcagaacaatgctccacatgctgtcattatt
gagccttcaagagaactcgcagaacagaccctaaaacaggttcaaatgtttcgtaagcat
ctagataatccagtggttcgtgaccttcttgttgttggtggtatacccgtgaaggagcaa
atagcagcactcaatgcaggtgtggatattgtttgtggtactccaggacgcttggaagat
cttattaatacaggacaactctctctccagtcttgcaaattctttgtgttggatgaggct
gatggacttcttaaacaggggcatgagcgtctcatcaataacatctacaactccataccc
aaaatcacatctgaaggcaagagactccagatggtggtctgttctgccaccatacattcc
tttcaagtgaagcgcatggcagaacgtttgatgcacttcccgacctgggtagatcttaaa
ggggaagatgctgtgcccgagactgtccaccacgttgtcgtaaccattgatcccagaacg
aatagtagctggagcaatcttcgtcgccatctgcaaactgatggcgtgcatgttaaggat
ggcgtacgacctgggaacaatacacctgagacattaagtgaggcggtgaagctgctgaaa
ggagagtactgcattaaggctattgacacacacaaaatggatcaagcactaatattctgc
cccactaagttggattgtgacaatttagagcgctattttaatcaaattgattcaaaggtg
gtctggacacccaatttggtcagacaggtgaagagagcatttaggatagttcgaagagat
gaagatggtcacaattgtgtttga
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