Procambarus clarkii (red swamp crayfish): 123773743
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Entry
123773743 CDS
T07930
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03008
Ribosome biogenesis in eukaryotes
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123773743
03015 mRNA surveillance pathway
123773743
03008 Ribosome biogenesis in eukaryotes
123773743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123773743
03009 Ribosome biogenesis [BR:
pcla03009
]
123773743
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123773743
mRNA cycle factors
Stress granule specific factors
123773743
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123773743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
UBA_8
LRR_EndoS
DNApolII_insertion
Motif
Other DBs
NCBI-GeneID:
123773743
NCBI-ProteinID:
XP_069168461
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All DBs
Position
72:5216502..5263353
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AA seq
662 aa
AA seq
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MGGRGNNRYPPRDFPTQTKPDGSRQYYEHDDRGSYKSNSNSGGGSGSRAYTRDGYRTTTK
IRGIRVWEADYDRGSRLPEIHVQGHWRGDRRGSGRMFRNQPRVPRLQGDDVDMHSNRGRN
RRQDMYKGRGGRRGKDFKNNRSQHNGNNSSLGWHKILIRDGGNANKDEVLESIRNLVHEP
FTPILFEAEGKNLVFYLEDNGRAAQAIVQTSRRITLPSGVRISLMSNRSPPPNRPVAANQ
HDSLKRIMSDRYSPELKRLTLKNFHNDANLIKEGIFCPLYRQPNLQLVVDIIVENIPQVE
EIDLSHNKINNLDALGCVVTSCPNLQKLDLGKNKLLNMDSLNQLAGLNLTELTLEGNPLC
DKFRETEVYISAVRKLFNKVLYLDGQELPKPIGFEVDEDDSKIPKSVPAYFVLPDVKDLV
LQFIEQYYQIFDTEDRKPLEAAYSKNALFSLTCHFPDTGPGARLSNLYISDNRNLKKVFA
SDQRHKLVFQGRSTIGCVLRQLPSTVHDPPSFTLDVPVADPKLIVVTLSGVFRQHADRNP
PIRSFTRTLTIIPEGTGFCICNEQLFITRATIDQVKRAFKTPIVPVENIQPVPENVPVPQ
QDTLVPLQEAMILKFSEASGMLPQFSQVCLEQNAWDFNKAGEIFTKLKAENKIPPEYFAQ
SL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtcgaggcaacaatagatatccacccagagatttccccacccaaacaaaacct
gacggctctagacaatattatgaacacgatgatcgaggctcgtacaaaagtaatagcaac
agtggcggcggcagtggaagcagagcttacaccagggatggttacagaactactacaaaa
ataagaggaattagagtctgggaagctgattatgacaggggttcacgccttccggagatt
catgttcagggccactggcgtggagacagacgaggatcagggcgcatgttccgcaatcaa
ccacgtgtaccacgtcttcagggtgatgatgttgatatgcacagcaacagagggaggaat
aggcgacaggatatgtacaaaggacgaggaggacgaaggggaaaggatttcaagaacaac
cggagtcagcataatggcaacaatagcagtcttggctggcataaaatattgatacgagac
ggagggaatgcaaacaaagatgaggttcttgaatctatacgtaacttggtacatgaacct
ttcacccctattttgtttgaagctgaaggaaagaatcttgttttctatttagaagataat
ggccgtgctgctcaagccatcgtacaaacaagtaggagaattactctgccctctggtgtt
cgaatctctcttatgagtaacagatctcctcctccaaacagaccagtagctgccaatcag
catgatagtttgaaacgtattatgagtgatcgatattctccagaactgaaacgactaact
ctgaagaattttcacaatgatgccaatctaataaaagaaggtatcttctgtcccttgtac
cgccaacccaacctgcaactggtggtggatattattgttgaaaatatacctcaagttgaa
gagattgaccttagtcacaacaagatcaacaaccttgatgcattaggttgtgttgtaacc
tcctgccccaaccttcaaaaacttgacttggggaaaaacaagctcctaaatatggactcc
ctgaaccagcttgccgggcttaatcttactgaactgactctagaaggcaatcctctctgt
gacaagttcagggagacggaggtttacatcagtgctgtgaggaaactcttcaataaggtt
ttgtatttggatggacaagaacttcctaagcctatagggtttgaagtagatgaagatgat
agcaagattcccaagagtgttcctgcctattttgttttacctgatgttaaggacctcgta
ctacagtttattgaacaatactaccagatatttgatactgaggatagaaagccattggag
gctgcatactccaaaaatgctctgttttccctcacgtgccacttcccagatactggcccc
ggtgcccggctctcaaacctctatatatctgacaataggaatttgaaaaaggtgtttgct
tctgaccagcgacataagctggtgtttcaaggccgcagtacaattggttgcgttctgcgg
cagctgccatccaccgttcatgatcctccatccttcactttggacgttccagtggcagat
cctaagctgatagtagtgactctgagtggggtgtttcgtcagcatgcagacagaaatccg
cctattcggtcattcacgcgcactttaacaatcatccctgaaggaacaggtttttgcata
tgtaatgagcagcttttcattaccagagcaacaattgatcaagttaagagggcatttaaa
actcctattgtgccagtggaaaatatccagccagtgcctgaaaatgttccagttcctcaa
caggacacacttgtaccactgcaggaagcaatgattcttaaattttctgaggcatcagga
atgttacctcagttttcacaagtgtgtttggagcagaatgcttgggacttcaacaaggct
ggagagatatttacaaagttgaaggcagaaaataagatcccacctgaatattttgcccaa
agtctttaa
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