Procambarus clarkii (red swamp crayfish): 123773870
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Entry
123773870 CDS
T07930
Symbol
PNPase
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123773870 (PNPase)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123773870 (PNPase)
03016 Transfer RNA biogenesis [BR:
pcla03016
]
123773870 (PNPase)
Enzymes [BR:
pcla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
123773870 (PNPase)
Messenger RNA biogenesis [BR:
pcla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
123773870 (PNPase)
Transfer RNA biogenesis [BR:
pcla03016
]
Prokaryotic type
tRNA degradation factors
123773870 (PNPase)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
123773870
NCBI-ProteinID:
XP_045623746
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Position
91:complement(16246249..16590185)
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AA seq
757 aa
AA seq
DB search
MYKVYRHCGKSGQLSRYILQSRYVSTTTQLRDKVETRAVLSNGRTLHIETGGYARLADGA
AVATLGDTSVLITAVSKPRSGPSPGFMPLTVDYRQKYAAAGRIPSNYFRRELAPTDKEIL
TSRIIDRSVRPLFPVGYCGDTQLSCQLLAVDGLYDPDVVSINAASAALAVSDIPWMGPVG
SVRMGLVDGEVIIQPTRRELSKSSLNLVVSGAENKLIVMLEGGGSNVLQQDLMKAIKMGV
KECQLVIKAIQELAKTAGKTKRSFTNSLHVPEEMLQAARTLSEMRLRSIFTDFSHDKFSR
DNAVNVLKSDVMQKLIEGFPDVDSQLAHLAFSQITKTVFRNLILDDNIRCDGRGLLDLRP
ISCGVDLYRPLHGSSLFQRGQTQVQCTVAFDAHENIPKLDPLLEATGGHRDRNFILHYTF
PSFATNEVARSGPISRREVGHGALAEKALRPLLPSYFPFAILLTSTVLESNGSSSMATVC
GGSLALMDAGVNISAPAAGIAIGLVTRYDDSNKLQDYKILTDILGIEDYMGDMDFKLAGT
SKGITALQADVKVPGIPLKVVMEAIQQATDGKGNVLTIMGDTIAHPRENKKETMPVLEKI
AVPAHKRSKVMGPGGMHIRRVQSETGVQLTWQEDGILSVFAPNLSAMEEAKEALTELLSD
REPTLEFGGIYTSTVVELRPQGVMVTLYDDMPPVLLHNSQLDTRKVHHPSALGIEVGQQL
KVKYFGRDPASGQMRLSRRALQASAAAVKNLHKAEPV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagtatatagacactgtggcaagtctggtcaattatcaagatacatactacag
tccagatatgtgtcaactactactcaactccgtgataaagttgaaacacgtgcggtttta
tccaatgggcggacgttacacattgaaactggaggctatgctcgtttagcagatggtgct
gcagttgctactctaggagacacttccgttcttatcactgctgtgagcaaacctcggtct
ggtccctctccagggtttatgcctcttactgtggattatcgtcaaaaatatgctgctgca
ggccggataccttcaaattacttccgcagggagcttgcaccaactgataaagagattctt
accagtaggattattgatcgctcggttcgtccattgtttcctgttggctactgcggtgat
acacagctttcatgtcagcttcttgcagtggatggcctttatgatccggatgttgttagc
atcaatgcagcatcagcagcacttgcagtatcagatatcccatggatgggaccagttgga
tcagtgcgcatgggattagttgatggagaagtaattattcaaccaactcgacgagaattg
tccaagagttcactcaatcttgttgtgagtggagctgaaaataagcttatagtaatgctg
gaaggtgggggaagtaatgttcttcaacaagaccttatgaaggccatcaaaatgggtgtg
aaagaatgccagcttgtaattaaagctattcaagaactggctaaaacagctggcaaaaca
aagcggagctttactaattccctccatgtcccagaagaaatgttacaagctgctagaacc
ctgagtgagatgcgcttacgtagtattttcacagacttctcacatgacaagttttcaaga
gacaatgctgttaatgtcctaaaatcagatgtcatgcagaagctgatagaaggatttccc
gatgttgattcacagttagcacatttagcttttagtcaaattacaaaaactgtctttagg
aatcttattttagatgataatatcaggtgtgatggcagaggtctgctcgatttgcgaccc
ataagttgtggagtagatctgtatcgtcccctgcatgggtcctcactctttcagcgaggt
cagacacaagtacaatgcactgttgcttttgatgcccatgaaaacattcccaagctagat
cctttgttagaagctactggtggccatcgggatcgaaacttcattctgcattacacattc
ccctcttttgcgacaaatgaagtagcaagaagtggtccaatctctcgacgtgaggtaggc
catggagctttggccgagaaggctctgagacctctcttgccttcttacttcccctttgca
atacttctcacatcaactgtactggaatccaatgggtcatcttctatggcaactgtgtgt
ggtggaagtctggccctaatggatgcaggtgtcaacatatctgcgccagcagctgggatt
gcaattggcttggtcacacgctatgatgacagtaataagctccaagattataagattttg
actgacatcttgggtattgaagactatatgggagatatggacttcaagctagctgggacc
tctaaaggcataactgctcttcaggcagatgtgaaagttccaggaattcccttgaaagtg
gtgatggaagccatacaacaagctacagatggaaaagggaatgttctcactatcatgggg
gacacaattgctcacccacgtgaaaacaagaaagagaccatgcctgtgctggaaaagata
gctgtaccagcccacaagagaagcaaagttatgggtcctggtggcatgcacattcgaaga
gtccagtctgagactggagttcagctgacatggcaggaggatggtatactctcagtcttt
gcaccaaatctgtcagcgatggaggaagcaaaagaggcccttactgaactgctcagtgat
cgagaacccactttagagtttggcggtatttacacttctacagttgttgaacttcgtccg
caaggtgttatggtgacactctatgatgacatgccaccagttttacttcacaattcacag
ttggatacaagaaaagtacatcatcctagtgcacttggcattgaagttggccagcaactt
aaagtgaagtattttggacgtgacccagcatcaggtcagatgagattgtctagaagagca
ctacaagcttccgctgctgctgtaaaaaatcttcataaagcagagcctgtatga
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