Procambarus clarkii (red swamp crayfish): 123773931
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Entry
123773931 CDS
T07930
Symbol
Syn1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123773931 (Syn1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH_17
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
123773931
NCBI-ProteinID:
XP_045623866
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Position
91:3505865..3554165
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AA seq
496 aa
AA seq
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MGEKVGNTEVLVGGVGGVWHQARLTLEADHLFVTLTDLDELNNLQGSDGESAPSDVPEPI
ASQKRVVQICKSDNNGLGISIKGGRENKMPILISKIFKGMAADLTENLYVGDAILSVNGE
DLKEATHDEAVRALKRAGKVVTLEVVPSFYVTVKYLREVTPYFRKASVMADIGWELQTGF
LGAENGFLTTDEDRSSPVMSNGPDTRSVPLLFCHLTQNFRCEEPHSIELHSPDRLHCLIM
KCSSEADIASWYNALHSTLDRLTISALIHANKMLGDVLDKATIHHMGWLKLKIDQGKDEW
EPQFCAVTDHDMILFQEVPWTKEAWANPLVFYPLLATRIVNSTHKGSLGGSEPITMTMRC
GTQEGVAMSVFQHDTHRDLATWVKVLVQGAHTAVQRQKEVACYCEWRGVEAKLVLHHEEG
FTLLSTHDAAGGRGRVLWTQPFHKLLMSSDDGARLIWLRFDGDMEVELDLKTNPKPFVFI
LHTFLSAKVHQQSLTS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaaggtgggtaacacggaggtcctcgttgggggggtcggaggcgtatggcac
caagcacgtctcaccctcgaggccgaccatctgtttgtcacactcactgacctggatgaa
ctcaataatcttcaaggctctgatggagaaagtgcaccaagtgatgttcccgagccaatt
gcaagtcaaaaacgagttgtccagatctgcaagtctgataataatggccttggtatctcc
attaaaggtggcagggagaacaagatgccaatcctcatatctaaaattttcaagggtatg
gcagctgacttgactgagaatctgtacgtaggagatgctattctctctgtcaatggggag
gatctgaaggaggctacacatgatgaagcggtgcgtgctctaaagagggctgggaaagtt
gtcacacttgaagtggtgccctccttctatgttacagtcaagtatctgcgagaagtgaca
ccttatttccgcaaagcgtcggtaatggcggatattgggtgggagctccagaccggtttt
ttgggtgctgaaaatgggtttctgaccactgatgaagacagaagctccccagttatgagt
aatgggccagatacaagatcagttcctctcctcttctgccatcttacacagaattttaga
tgtgaagaacctcacagcattgagctgcactctcctgatcgcctacattgtctcataatg
aagtgctcctcagaagcagacattgccagctggtacaatgccttgcactcgacgctagat
cgcctcaccatttctgcactcattcacgccaacaaaatgcttggagacgtgctagacaaa
gctacgatacatcacatgggttggcttaagctgaaaatagatcaaggtaaagatgaatgg
gagcctcagttttgtgctgtaactgaccatgatatgatcctcttccaagaagtcccatgg
acaaaagaggcttgggccaaccctcttgttttctatccacttttggctaccagaattgtt
aattcaacacacaagggatcgttgggtggtagtgagccaattacgatgacaatgcgttgt
ggcacccaagaaggggtagccatgagtgtcttccagcacgacacacatcgtgacttggca
acttgggtgaaagtgttggtacagggtgcacacaccgctgttcagagacagaaggaagtt
gcttgttactgtgagtggcgaggagtcgaggccaaattagtgcttcatcacgaagaaggc
ttcacgctattgtccacacatgatgctgctggtggtaggggtcgcgttctgtggacccaa
ccattccacaagttacttatgagctctgatgatggggcgaggctaatttggcttcgtttt
gatggagacatggaagtggagttggacttgaaaaccaaccccaagccttttgtcttcata
ctccacaccttcctctcagccaaggtccatcagcagtccctcacttcctga
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