Procambarus clarkii (red swamp crayfish): 123773954
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Entry
123773954 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123773954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123773954
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
123773954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
123773954
NCBI-ProteinID:
XP_069174784
LinkDB
All DBs
Position
91:complement(5055888..5103430)
Genome browser
AA seq
1431 aa
AA seq
DB search
METVVYSGVSLEIPSEICQDISLLFEILSPDTWNNHLTDEHREMLMGYLPEFPHNDLEEK
TRTLEMFFMDENFRYGTPLRLFHEQLCKGFFNPEISKMRAIHKKIMYREYRYRQKQYLHH
TLEEVLVRRKRVLDIVSNMPPDDIPKIPRLTPLHNKKKSSRTSIEYCTKKRYFRELAAIR
AEVGGDTSDTSEDEIYPEGPGASLNKKQRRQLGGLEGSLPPDLLPVRATHSSGSLALDLE
LKITPTSNPLDLTDDHFRAMLAGHRLRRSKRESSVDLDTRGITLQDVISRAQIQLKRPPQ
RAIMSPLTLEKPKKKIKVKKETSSILVSSNHLDLPVTIKSELLSDSESSSSSSSSSTVSD
SEDIEVKKETPVVSPSVKKRIGAKGIKIKLEPVEPLSANEDIDIGGLGVEPIVKEEHIKV
EIKEEPMEDQVTAAIETSSELTAALESIGACIAPELTQETHICFFSLIRDIICSTGEQRM
TRAQLESSIRVWQESAISPLNEWYSLVPSWVNILPSAINFLCGHFTDVQPADFVPYIEYK
SLLRVYQWIGAGRDSDGHLEPLAQFWLANKSSMSSEWIEDDILGSRLETEESDIIPPPRC
YTTWTVQPATEPEKDMYRAQEKLRYEKPHKAYTFRMHGYESVVGPVKGIYTQQTGLNKAR
GHSLLVPDRPAYVTILSLVRDAVARLPNGEGTRSDICELLKESQYLAPLTSPTAENNLNS
VVSGALDRLHYENDPCVKYDTPRKLWIYLHRNRNEEEFERMHHLNGPGGNKIKKPAPRRQ
SRAKAKDPLSMKGPPNVALEPVSSPIKVEGTQVKLKSEEVTALTKVKPDSPVKLDQLSSA
TVGKAVTSVRVGGVRGAVGTSSVQTIQVSTAGGVQTIKVALPPGAQTITKVTPQALGKVP
TSSITKVGNQTINRVPTQPLGKPGSTAIKGVNLQQSVLQTAVSGPTIGPESVLSTQQITS
LPSGNIGQGKTRAPVVTLTTREAARLPAPSVSQARPISSASTTPANQQHATQTLLTSQVT
AGGIAAGKLSNTATVVNMSAAAAQKSNLFSLGGIKLLHAAPQQIAGKGGSNSASMMNSIT
KLQTLMVDGKVLMQGGKIATVESLLSQADKTTQLQGGVITTMAGNKLAGGNVIQLSGGAG
GVQRLTLVSPQGSHVPLGSGGQRLVLATGSQAGKLDGSGNKGQVVQTIQTLQPGSHVVQT
SHGTVASSAASSTTTSPSITSTTTQVITGPVASTPSALTTSQARFFSVGQQQKTIVQGLN
MSGKPSVLSGGGIRLVQPAGGGAGGGTVVTGGTTTTGNLITIGGKQVLLTSKPFAQQGQL
QQVMLTSGSIKGGIQGTQGAQTASQGAVVVASGAGGQQIVLPASALQGSQLNLKGLQAFH
TLKVIPASQVTQQQRGKPVLARIVSPASMRGAVPTSSITNTLPSGHDSSKS
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggagacggttgtctattctggggtgtctttagaaattccatcagaaatctgtcaagac
atatcattattgtttgaaattctgtctcccgacacttggaacaatcatctcactgatgaa
caccgagaaatgttaatgggctatttaccagaatttcctcataatgacctggaagagaaa
acacgaactttagaaatgttttttatggatgaaaacttcagatatggaacaccactcagg
ttgtttcatgaacagctctgcaagggcttcttcaaccctgaaatttccaagatgagagcc
attcataagaagataatgtacagagaatacagataccggcagaagcaatatcttcatcat
acactagaagaggttttagtgcgaagaaaaagggtgctggatattgtgagcaacatgcca
ccggatgacattcccaagatcccgcgactcacacctttgcataataaaaagaagagttct
cgtacctccattgagtattgtacaaaaaagcgctactttcgtgaattggctgcgattcga
gcagaagtgggaggagatacaagtgatacatcagaagatgaaatatatccagagggacca
ggggcctccctcaataaaaaacagcgtcggcagttaggagggctggaaggctcgctaccg
ccagatttattaccagtgagagctacgcacagtagtggctctcttgcgctagacctcgaa
ctgaaaataacacccactagtaacccactagatcttacggatgatcattttagagccatg
cttgcaggacacaggcttcgaagaagtaaaagagagtcgtcagttgacctagatactcga
ggcataacactacaagatgttatatctcgagctcaaattcagttgaaaagacctcctcaa
agagccattatgtcaccattaacactagaaaaaccaaagaaaaaaattaaggtaaagaaa
gaaacttcatccatactagtctcttccaatcacttggatcttccagtgactataaaaagt
gaacttctaagtgattcagaatcttcgtcgtcttcctcctcatcttcaacggtcagtgac
tcggaggatattgaagttaagaaggaaacgccagttgtgtctccatctgttaaaaagaga
attggtgctaaaggtattaaaataaagttagaaccagtggagcccttgagtgcgaatgaa
gacatagatattggaggccttggagtggagcccatagtgaaggaggagcatataaaggtt
gaaataaaagaggaaccaatggaagatcaagtaacggctgcaattgaaacgtcatcagaa
ttaacagcagcacttgaaagtattggtgcttgtattgctccagagttgactcaagagact
cacatatgtttcttcagcctgatcagggatataatatgttctactggcgagcaaagaatg
acaagagcccagttagagtcgagtataagagtgtggcaggagtctgccatctctccactt
aatgaatggtattctcttgtcccgtcttgggtcaacattctcccttctgccattaacttt
ctttgtggacattttacagatgttcagcctgcagacttcgtaccttatatagaatacaag
agtctgctgagagtttatcagtggattggtgctggaagagacagtgatggtcatttagaa
ccccttgctcaattttggcttgctaataaatcttctatgagtagtgaatggatagaagat
gatatactaggatctaggctagaaacggaggagagtgacatcattccacccccacgctgc
tacaccacatggacagtgcaacctgcaacagaacctgagaaggacatgtatcgagcacaa
gagaagctgagatatgagaaaccgcataaagcatacacgttcaggatgcatggctatgag
agtgtggtaggaccagtcaaaggcatttatacccagcagacaggactgaacaaagctaga
ggccattccttattagttcctgacagacctgcctatgtcacaatactctcccttgtgcga
gatgctgttgctcgtctaccaaatggggaaggcacacgatcagatatatgtgagctgctt
aaagaatctcagtatctggctcccttaacaagtccaactgcagaaaataatctgaacagt
gttgtatctggtgctctggatagacttcactatgaaaatgatccatgtgtgaaatatgat
accccacgaaaactttggatttacttacaccgcaaccgaaatgaggaagaatttgaacga
atgcatcatttaaatggaccaggtggcaataaaataaagaaaccagctcctaggagacaa
agtagagcaaaggctaaggatcctttgtccatgaagggtcctcctaatgttgctctggaa
cctgtttcttctcccattaaggttgaaggaactcaagtaaaacttaaatcagaagaagtg
acagctttaaccaaagtaaaaccagacagtccagtgaagttagaccagttaagctctgct
actgttgggaaggcagtaacttccgtcagagtgggtggagtgagaggggctgttggaacc
agcagtgtacagacaattcaggtatctactgctggtggtgtccagacaatcaaagtggct
cttcctcctggagcccaaacaatcaccaaagtcacacctcaggctctgggaaaagtacca
acttcttccattaccaaggttgggaaccagacaattaacagagtacctactcaaccactt
gggaagcctggcagtactgctattaagggagtgaatttacagcagtctgttctacagact
gctgtttctggaccaacaataggaccagagtctgttttgagcactcaacaaatcacaagt
ttaccctcagggaatataggtcagggcaagacacgagctccagtagtgacgttgacaacg
agagaagcagcaaggctgccagcaccgtctgtgtcacaagcaagacccatctcctcggcc
agcaccacaccagctaaccagcaacatgctacacaaacgcttctcacctcacaagtgaca
gcgggtggtattgcggcaggcaagctgtccaatacagcaacagtggtcaacatgagtgct
gccgctgcccagaaatctaacttgttttccttgggtggcatcaagttgcttcatgcagct
cctcaacagattgcaggaaagggtgggtcaaattcagcttcgatgatgaactccattacc
aagttacagacattaatggttgatgggaaagtgttgatgcaaggaggaaagattgcaacg
gtggagagtcttcttagccaggctgacaagactacacagctgcaaggtggtgtaataaca
acgatggcaggcaacaaattggcaggtggaaatgtgatccagctttcaggcggtgctggg
ggcgtgcagagactaacactagtgtccccacaaggctcccacgttcccctgggttcaggt
ggtcaaaggcttgtcttggccactggttcacaggctggaaaattagatgggtctggaaac
aaaggtcaagttgttcagaccatccagacgttgcagcccggcagtcatgttgtgcagacg
agccacgggacagttgcctcctccgctgccagcagcaccaccacatctccctctattacc
agtactaccactcaggtcatcactggtcctgttgcctcaacacccagtgctctaaccacc
tcacaagcaagatttttctctgtaggccaacagcaaaaaactattgtgcagggcctaaat
atgagtggaaagccttcagtactatctggtggaggaattcggcttgtccagcctgccggg
ggtggggctgggggagggacggtagttacaggtgggactactactactggcaacctaata
actattggagggaagcaggtgctgctgacatctaagccttttgcacaacaagggcagctg
cagcaggtgatgttgaccagcggcagtataaaaggtggaattcaaggcacacagggagca
caaacagcaagtcaaggagcagttgtcgtagcaagcggggcggggggacagcaaattgtt
cttccagcatcggcgcttcagggttctcagctaaacttgaaaggccttcaggcctttcat
actttgaaagttattcctgcatcacaagtcacacaacaacaaagaggaaaaccagtgttg
gcacggatagtatcccctgcttctatgagaggggcagttccaacctcttctataactaat
actttgccttctggacacgattcttctaaatcttag
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