Procambarus clarkii (red swamp crayfish): 123774367
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Entry
123774367 CDS
T07930
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123774367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123774367
03036 Chromosome and associated proteins [BR:
pcla03036
]
123774367
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123774367
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123774367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
123774367
NCBI-ProteinID:
XP_045624502
LinkDB
All DBs
Position
61:complement(15512820..15566805)
Genome browser
AA seq
1919 aa
AA seq
DB search
MFGQQRAAPFGSTTSTFGTGFGTPSTTTGTTGFGATTFGRSAFGNTQQTTSFGASTTPFG
AAPTSSTSLFGTQPQQTSGGLFGQQQPTQTSTSFSQPSTGFGTSGGGLFGQTQQPTGTGL
FGSTTTGAFGAQQSTQNRPFGFGQTITSSTSTAGGLFSSTQPATGGGLFSTGVGFGGTGG
VSGTTVKYEPVTGSDTMTRNGVSTSIRTKIEVISTMKEYENKSLEELRVEDYLANRKGPG
QGTTIPGFGQTQQQAAQPQLGGTGLFGTTSGTSLFSSTKPPENKTLFGSGTSTGFGTPTG
GSLFGSTATTPAFGQTSTASNPSFSFNTQQQQQQQKSTGFNFGSTATTSPSLFGSTPQQQ
QTSGFGLGGGFQLGQTTQQQNTGGLFGNQNKPGGFLSNQNTSGGLFGSKPAGITQPLSTG
FGTTSAVTPFGQATNTSAGGGLFGAQNTQNKTGIFSGFNNNSSFGSTGLFGQTNNQQKPG
GAISFGQFGSTNTMGQTLGTNTGTGLFNPSGVNTNVGMTGTGLLNTNSAFGMPQLNMMGN
AGGGIYTDLGKLVKAMTEKPIFDIPLGSTTSSSSDRSSSTSSNDQGSSKLPSSSLKPTYV
LSPSLVSNKPKPKPINKANNQGNDRHWLFKGLEDPSEESSEDFLKPKKYPSVRKLNLKVF
KGVKTDSASLGSTPERAHGNSSSDAPSPLTTPISSLGDNSTLRTSGSLSHDNSPTPEIIK
GRSKVKRLNLVDKHGQMNDTLVDLNVNHLKVTEPADDHPDADDLVDHDKTDLDAEANKEN
NVSLFNSVDEEDLPEIINRSSDKPHPAGVKLTRSGYYTLPSLDDLGEMVDSEGRCLVENF
TVGRYGYGNVCFLGVTDIASIDLDAVVFILRKQIEVYPEGTQKPGQGQELNKPAVITLDC
VWPIDKTTREVIKSTERLESMSWGDYLERQCVKMDANFIEYRPETGSWVFKVKHFSKYGL
QEDNDEEDMATIPPKTNQIQPIPPQSGAATQLPALPMHISVPPVTSLTSPPQFGLGQMTM
PSLASKQASQPRYLDSPHQDVQVPDDEVMDSSIAKEPEESASLSIMSPSSERLTVLSRVV
PRTVQLAKSQMFGADDDDEPLQTTRESTPTPQGPRVSSKKLMLATDSSLNQSRGATMSPV
PSEPKARVVLHLQPLAMASPPKANVQTESCPAPPFRDSRCEYEMLPSGCDVGTEVGHVPP
QHQTTIVPFASSLMYGLDHCLSDMGAFMGRSFRVGWGPCWNLVHAGTPLASTTMEECSDD
VTAMEAAVTHPSPASFLFLGSLASHPKTAPSADSPRYNLMVEKLHTVQPHSHTKHHLTEA
SLECVLERSILDIDEMSESKDPKCPFFRPAKDIDLLHQLAETAASFGHEDPTISNIFNLC
VALWGRLDFYSPESGESMQDSLDGESDYSVSRARVEAVSQWLEAVSHATVQEEVAIALNK
DNSEEGYLDAVFAHLTARQISEACVLAQDEGDHHLALLLAQACLGQDAPRQILAQQLANW
AEGGTDALMAPSRLALYSLLAAAPTHQASHTTVNTCHGLDWRRAFALHLWYVCPATSTIM
EALQEYEQAAGLRGDAPSYCEAPLPPYLAYQALPNGMKASYDICYHLLKLYTDPMHQLEA
LLNPATITPDPLDVTVSWLLWRILESLNYQHLSRQLSASLHLSMAALMESAGQWHWAIFV
LLNINEEERRRKEVRELLQRHVAVGEENESNPKYAMQEDFVISKLSIPKKWIHQAKATKA
RSLNMVDEEAWYLLKAGEYNRAHMLIVDTIAPNSIINEDHHYLHSFLDQLRDDGVCSTVV
DWAIGGGVYADYLDVCSVVEDMKKSADPTPAMLEQLRPRLLALCSRLNNLKCQTATHRLC
VSEMSRVVVGVLRAVLGEGTDATQVLSQQLSGLPLTHDYALTELNMVTTHYLTHLSAET
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaacaacgtgctgctccgtttggtagcaccacatcaactttcggcaccggg
tttggaacccccagcaccacaaccggtactaccggattcggagctactacatttgggcgt
tcagcctttggaaatacgcaacagacaacaagctttggagcatcaacgactccatttgga
gctgctccaacctccagtacgtctctgtttgggacacagccacagcagactagcggagga
ctgtttggacagcaacagcccacacaaacctcgactagtttcagtcagccgagtactggt
tttggcactagtggcggaggactctttggccagactcagcaaccaactggcactggtcta
tttggaagcaccactactggtgcctttggagcgcagcagtccactcagaatcgccccttt
ggttttggtcagactatcaccagcagcaccagcactgctggcgggctcttcagctctaca
cagcctgcaactggagggggcctctttagcactggtgttggtttcggtggaaccggtggt
gtgagtggtacaacagtcaagtatgaaccggtaactggcagcgacaccatgaccagaaat
ggggtctcgacaagcattcgcacaaaaattgaagtcatctctactatgaaagagtatgaa
aacaagtcactagaagaattacgtgttgaagactatcttgccaatcggaagggacctggt
cagggtacaaccattcctgggtttggtcagacacagcagcaagcggcgcagcctcagctc
ggcggcacggggctcttcggcaccaccagtggcacatctctattttcatctaccaaacct
ccagagaataagacactctttggtagtggaacttcgactggatttggtacacctactggt
ggaagcctttttggatcgactgcaacaactcctgcctttggacaaacgagtacagcatcc
aacccaagcttctccttcaacacacagcagcagcagcagcaacaaaagagcactgggttt
aattttggcagtactgctaccacttctccgtccctatttggctctacaccacagcagcag
cagacgtcgggatttggccttggcggtggattccagttaggccagactactcagcagcag
aatactggagggctttttggtaatcagaacaaacctggaggattcctctccaatcagaac
acaagtggaggtctctttggcagtaaaccagctggcataacccaaccactttctacaggc
ttcggcaccacatcggctgtaaccccttttggccaggccactaacaccagtgcaggaggg
gggctctttggggcccagaatactcagaataagacaggaatattttctggatttaacaac
aattctagttttgggagcacgggtctctttgggcagacgaacaatcagcaaaagcctggt
ggtgcgatctcctttggtcagtttggaagcacaaataccatgggacaaacgctgggcaca
aacaccggaactggcctctttaatcccagtggcgtgaacacgaatgtcggcatgaccggc
actggtctcctcaacacgaactcggcatttggtatgcctcagctaaatatgatgggcaat
gctggaggaggtatctacactgatctgggcaagctggtgaaggcaatgacggagaaacca
attttcgacatcccgttgggcagcacgacatcctcatcgtcagatagaagcagcagtaca
tcaagtaatgatcaaggcagctccaagttgcctagctccagtctgaagcccacttacgtt
ctctctccatcgcttgtctcaaacaaaccgaagccaaagccgataaataaggccaacaac
caagggaatgatcgtcattggctgttcaaaggactagaagaccccagcgaggaaagttca
gaagatttcctaaagcccaagaaatatcccagtgtcagaaaactgaatcttaaggtattc
aaaggagttaaaaccgattccgcctctttaggcagcacgccagagagggcgcacggcaac
tcaagtagtgatgcaccctctcctcttaccacgcctatcagctccctgggtgacaattcc
acgcttcgtactagtggttcgctctcgcacgataattctccgacaccagaaataatcaag
ggtcgaagcaaggtgaagagacttaatttggttgacaaacatgggcagatgaacgacaca
ctggtggacctcaatgtgaaccacttgaaggtcacggagcccgctgatgaccatccggac
gcagatgatttagttgaccacgataaaactgacctggatgcagaggccaacaaggagaat
aatgtttccctcttcaattctgtagatgaagaagaccttcctgagatcattaataggtct
tccgataaaccacatcctgctggtgtcaagttaactcgctccggatactacacgcttccc
tccttggatgatctcggagagatggtcgactccgaaggaagatgtctggtggagaacttc
actgtgggaagatatggctatggcaacgtgtgcttcctaggcgtgacggacatagctagc
attgacttggatgctgtggtgttcatcttgaggaagcagatagaggtgtatcctgagggc
actcagaaacctggtcagggtcaggaacttaacaaacctgctgttatcacactagactgt
gtgtggcccattgataagacaacacgtgaggtgatcaagtcgactgaacgactcgagagc
atgtcgtggggggattaccttgagcgtcagtgtgtaaaaatggatgccaacttcatagaa
tatcgccctgaaactggatcatgggtcttcaaggtaaagcatttctcgaagtacggcttg
caagaggataacgacgaggaggatatggcgaccatccctcccaagaccaaccagatccag
ccaatcccacctcagagtggagctgcgactcagcttcctgctctacccatgcacatctcg
gttcctccggtgacgtctcttacgtcacccccgcagttcggacttggccagatgaccatg
ccaagcttagcttccaagcaggcatctcagccaaggtatcttgacagccctcatcaagat
gttcaagttccagatgatgaagttatggactcatctattgcaaaggaacctgaggagagc
gcgtctttgagtattatgtctccaagttcggagcgactgaccgtgctgtctagagtagtg
cctaggaccgttcagctggctaagtcgcagatgtttggtgccgatgatgatgacgaacct
ctccaaacgaccagagaatccacacctacaccacaggggcccagagtgtcgagcaagaaa
ctgatgttggcaacagattcgtctttaaaccagagtcggggagcaacaatgagccccgtg
cctagtgaacccaaggcgcgggttgttctccaccttcagccacttgccatggcttctcca
ccaaaagccaatgtacagacagaatcctgccctgcacctccttttcgggattcccgttgc
gagtatgaaatgctgccaagcggttgtgacgttggtacagaggtgggccatgttcctccc
cagcatcagacgaccatcgttccctttgcctcttccctcatgtatggactggatcattgt
ttgtcagatatgggggctttcatgggacgctccttcagggtggggtggggtccgtgctgg
aatttggtgcacgcaggcacaccgctcgcttcaaccaccatggaggagtgcagtgatgac
gtgactgcgatggaagcggctgtaacacatccttcacctgcttccttcctcttccttggc
tctctggcttctcatcccaaaacggctccgagtgcagattctcccagatacaacttgatg
gtagaaaaattgcacacggtccaaccccactcacacaccaaacatcacttaactgaggcc
agtttagaatgcgtattggaacgaagtattttggacattgacgagatgagcgaatccaaa
gacccaaagtgcccctttttccggccagcgaaggatatagacttgctgcatcagctggca
gagactgctgcatcgtttggccacgaagaccccactatctccaatatatttaatctgtgt
gtggcactctgggggagattggacttctactctcccgagtcgggtgagtcgatgcaagat
tcgttggatggcgagagcgattacagtgtgtctcgagcacgagtagaagccgtaagccag
tggttagaagcagtgagtcatgcaactgtccaggaggaagtggccattgccttaaacaaa
gacaacagtgaagaaggctaccttgatgctgtgtttgctcatttgactgcacgacaaatc
tccgaggcttgtgtcttggcacaggatgaaggtgatcaccacctggctttgctgttggcc
caggcttgccttggccaggatgctccacgacagattctagcacaacagctagcaaactgg
gccgagggtggaactgatgccttgatggccccatctcggctggcactgtactcgctgcta
gctgcagcccccactcaccaagcctctcacaccacagttaacacttgccatggacttgac
tggagaagagcatttgcccttcatttgtggtatgtttgtccggcaacttcgaccataatg
gaagctcttcaagagtatgagcaagcagcaggactaagaggagatgcacctagttactgt
gaagctcctctacctccatatctagcataccaagccttacctaatggcatgaaagctagc
tatgatatctgctaccacttgctgaagttgtataccgatcccatgcaccagctggaagca
ctacttaatcctgccaccatcacgccagacccactggatgttactgtcagctggctgctg
tggcgcatcttggagagtctcaattaccagcacctctcgcgacaactaagtgccagtctt
cacctgagtatggcagctctcatggagtcagcggggcagtggcactgggccatttttgtc
cttcttaatattaatgaggaagaaagacgcaggaaagaagtgcgagagcttctgcagcgt
catgttgccgtcggtgaagagaacgagagcaacccaaagtatgctatgcaggaggacttt
gtaatctcaaaactcagcattcccaagaagtggatacaccaagcgaaagcgactaaggct
cgctctttaaatatggttgatgaggaagcatggtacctgttgaaggctggtgaatacaat
cgtgctcacatgcttattgttgacactattgctccaaattctattataaatgaggaccat
cactaccttcacagcttcttggaccaacttcgtgatgatggcgtatgcagtactgttgtg
gattgggccattggtggaggagtgtatgcggattacctggatgtatgctctgtggtggag
gacatgaagaaatctgccgaccctacgcctgccatgctggagcaacttcggccacgtctt
ctagcactttgctccaggctgaataacctaaagtgtcagactgctacacataggttgtgt
gtgtcggagatgagccgcgtggtggtcggggttctgagggcagtattgggggagggcacc
gatgcaacgcaggtgctctctcaacaactgtccggtctgcccctcactcacgactacgcc
ctcactgaactgaacatggtcaccacgcactacctgacgcatctttctgccgagacctga
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