Procambarus clarkii (red swamp crayfish): 123774548
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Entry
123774548 CDS
T07930
Name
(RefSeq) autophagy-related protein 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04136
Autophagy - other
pcla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123774548
04136 Autophagy - other
123774548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123774548
03029 Mitochondrial biogenesis [BR:
pcla03029
]
123774548
Membrane trafficking [BR:
pcla04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123774548
Others
Specific organelles associated proteins
Auto phagosome
123774548
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123774548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_HPS5
WD40_RFWD3
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_VPS8
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
123774548
NCBI-ProteinID:
XP_045624849
LinkDB
All DBs
Position
51:18690709..18723573
Genome browser
AA seq
558 aa
AA seq
DB search
MAWSKSSEGEWRHAIYCKLRERNKKEYENINDLIQLHNRVFEQSESLRNENLQLTLQNEK
LRQENTHLQSHGGGGSGSEGGGASSVVVQALEQKLYKLQEELTDLHRRKGENAQQLVELN
QCLQERDKIMATKDNKLAEYESDLLILREDLAAKEATLIDVQGVNQVLRDEYQTLNLAFT
ALEEKYRRAQEENRELIDRWMAQKAKDAEKLNLENDTALRKRQMVLEEQLKEAAREPKQV
NMDDKFACSPPICLSAVLPAKAYLKYDAHDGEVNCICFSPQGKMLATGGGDRKLKLWDIS
RAANAEARGLLTGSNAGVTAIDFDMEESLILGASNDFASRVWTVVDHRLRHTLTGHSGKV
MAARFLSESAKVVTGSHDRTLKIWDLRSRACIRTIFAGSSCNDLVASDSAATTIISGHFD
KKIRFWDTRTEQSANEVPLQGKITSLSLSRDGFYLLSCVRDDSLKILDLRKNQVINTFTD
DSFHVGADYTRATFSPDAMYVAAGSCDGGVYIWNVNTGKLEKTLREHSACVVACAWHPSG
KSLVSCDRAKKVIAWSDF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagtaaaagttcggagggcgagtggcgacatgctatatactgtaagctacgg
gagagaaacaagaaagagtacgagaatatcaatgatcttattcagctacataaccgtgtc
tttgaacaaagtgaatccttaagaaatgagaacctgcagctcacattacaaaatgagaag
cttcgccaagagaatacgcatttacaaagtcatggaggtggtggcagcggcagtgaaggt
ggaggtgcctcatcggtggttgtacaggccttggagcagaaactatataagctacaagaa
gagctgacagatttgcatagacgaaaaggtgaaaatgctcaacagctggtcgaattgaac
cagtgccttcaggaacgtgataaaatcatggcaacaaaagacaacaaattggcagaatat
gagtcagatcttttgattttacgagaggatttagcagctaaagaggcaacacttatagat
gtccagggagttaaccaagtgctacgagatgagtaccagacacttaacctagcttttaca
gcattggaagaaaaatatagaagagcacaggaagaaaaccgagaattaattgatagatgg
atggcacagaaggctaaagatgcagaaaaactaaacctggagaatgacaccgcactcaga
aagcgacagatggtgcttgaggaacaacttaaagaagcggcacgtgagcccaagcaagtg
aacatggatgataagtttgcctgtagtcctcccatttgtctatctgctgtcctgccagct
aaggcctaccttaaatatgatgcccatgatggagaggtgaattgcatctgctttagcccc
cagggaaaaatgctggcaactgggggaggtgataggaagctgaagctatgggacataagt
cgtgcagcaaatgcagaagcaagaggacttctaacgggcagcaatgcaggagtgacagct
atagactttgatatggaagaatcgctcatcctaggtgcctcaaatgactttgccagcaga
gtatggactgtcgtagatcatagattaagacacacattaacagggcattcgggtaaggta
atggccgcaagatttttgtcagaatcagcaaaggtggtaacggggtctcatgaccggacc
ctaaaaatctgggatctacggagccgtgcatgcattagaactatctttgctgggtctagc
tgcaatgatcttgtagcatccgacagtgcagcaacaaccattatatcgggccactttgat
aagaagattcgattttgggacactcgaactgagcagtcagcgaatgaggtgccacttcaa
ggaaaaattacatcattgtctttatctcgtgatggattttacttactaagttgtgtacgt
gatgattccctcaaaatcttagatcttcggaaaaatcaagtaataaatacattcactgat
gatagcttccatgttggagcagactacacgagagcgacattttcccccgatgccatgtat
gttgcggccgggagttgtgatggtggtgtgtacatatggaatgttaatactggcaagctt
gagaagactctgagggagcactctgcctgtgtcgtggcgtgcgcttggcatcccagtgga
aaatcactcgtgtcttgtgatcgagctaaaaaagttatagcctggtcagatttttag
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