KEGG   Procambarus clarkii (red swamp crayfish): 123774775
Entry
123774775         CDS       T07930                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla03030  DNA replication
pcla03410  Base excision repair
pcla03420  Nucleotide excision repair
pcla03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123774775
   03410 Base excision repair
    123774775
   03420 Nucleotide excision repair
    123774775
   03430 Mismatch repair
    123774775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcla03032]
    123774775
   03036 Chromosome and associated proteins [BR:pcla03036]
    123774775
   03400 DNA repair and recombination proteins [BR:pcla03400]
    123774775
DNA replication proteins [BR:pcla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123774775
  DNA Replication Termination Factors
   ELG1-RFC complex
    123774775
Chromosome and associated proteins [BR:pcla03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123774775
DNA repair and recombination proteins [BR:pcla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123774775
  Check point factors
   HRAD17(Rad24)-RFC complex
    123774775
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_lid_RFC1 AAA_30 AAA_assoc_2 AAA_22 AAA_24 AAA_19 AAA_16 Mg_chelatase Gp44_lid AAA_11 bpMoxR RlmN_N ResIII AAA_7 RuvB_N DUF815 SLFN-g3_helicase AAA_5 DNAX_ATPase_lid AAA_18 ATPase_2
Other DBs
NCBI-GeneID: 123774775
NCBI-ProteinID: XP_045625325
LinkDB
Position
68:complement(6340614..6356789)
AA seq 356 aa
MQAFLKTGKLGGGSSSAGPSKEKVPRKKGPTPWVEKYRPKTVEDVAYQDEVVSVLKSTLM
GADLPNLLFYGPPGTGKTSTILAAARQLFGDLFHQRVLELNASDERGIQVIREKVKRFAQ
TTVSSTRPDGKPCLPYKIIILDEADSMTNPAQAALRRTMEKQSRTTRFCLICNYVSRIIE
PLTSRCSKFRFKPLAHGIMMKRLSYICEEENVKYEDGVLEAFVETSEGDLRRAITTLQSA
ARLRSGEKIQQQDVYEITGVVPEKWLDELFEVCLTDSYEKLTDFITLMMMEGFSASQIMN
QIHDRIVTHDRLSDLQKAAIFERLAICDHRLMDGGDEYLEVLDLSCTIMTQLCHAT
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcaagccttcctcaaaactggaaagcttggtggaggctctagctcggcaggacccagc
aaagaaaaggttcccaggaagaagggacctacaccttgggttgagaaataccggccaaag
acggtagaagatgttgcttaccaagatgaggtggtgtctgttctgaagagcacactgatg
ggtgctgatctgccaaatttgctgttttatggacctccaggcactggcaaaacttcaacc
attttggctgctgcaagacagctatttggagaccttttccatcagagagttttagagtta
aatgcctctgatgagcgaggaattcaggttataagagagaaggtcaagagatttgcccag
acaactgtgtccagcaccagaccagatggtaaaccatgtctaccttacaaaatcattata
ctggatgaggctgactcgatgactaatcctgcccaagcagccctcaggcgtactatggaa
aaacagtcccggacaacccgtttctgtctgatctgcaattatgtgtctcgcattattgag
cctcttacatcaagatgttccaagtttcgttttaaacctcttgcacatggaattatgatg
aagcgactgtcttacatctgtgaagaagaaaatgtcaaatatgaagatggtgttttggaa
gcgtttgttgaaactagtgaaggagatctgcgaagagctattacgactttacaatcagct
gctcgacttcgtagcggtgaaaaaatccaacagcaagatgtttatgaaattacaggagtt
gttccagagaagtggttggatgaactttttgaagtgtgcttgactgactcctatgaaaaa
ttaactgatttcatcaccctgatgatgatggaaggtttctctgcaagccagataatgaat
caaatacatgatcgtattgtcacacatgacagattaagtgaccttcagaaagctgccatc
ttcgaaagactagctatatgtgatcatcgactcatggatggtggggacgagtatcttgaa
gtgttggacctctcttgtactataatgacacagctctgtcatgctacatga

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