Procambarus clarkii (red swamp crayfish): 123774776
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Entry
123774776 CDS
T07930
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123774776
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123774776
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123774776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_4
zf-RING_4
zf_RING_Vps8
zf-RING_16
zf_RING_Vps8_fungal
zf-C3H2C3
Herpes_glycop
PHD
DUF6358
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
123774776
NCBI-ProteinID:
XP_045625327
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All DBs
Position
68:6298203..6318518
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AA seq
486 aa
AA seq
DB search
MEAGTRQRMIILAAWMLAGLAHWCQADVIIISTLTNKTFTAVGDLPALFGPPIPLTGFKG
YAIYVTPPDACSKVRPPPKSKNITGPWIGIVKRYNCAFVEKVLNTQIAGYDAVIVHNVGS
NSIQPMGSDNQSLSEKVNIPSVFIGQDDAFMIIENFLYDKGYILEITDDLPFNLQNYLVP
FAITIGICFIVMLTFMVVKCVRDYRRSRRHRLSSRALKKLPVHKFKKGDPYECCAICLED
YVDNDKLRILPCEHAYHAKCIDPWLTKNRRVCPVCKRKVFTGDERPSDLETDSEDENSPL
INSEGGTQGGTFDSQRENPFQEAQRLADERRRRRRLRRNVSHNVECGPEGYQRLAESTDD
EEGEGEEGEDEEEQREEEKNEVSGNSAQVVSGSPEHAVCEGEVNSPQSSQEPPATVCVIV
HDSPRPISIRDSSSLSRNSSLSSHGTPPGPVQIAVDVVNSPASGSSLVPQPSQSYGDAGS
ERDYVV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggtactagacagaggatgattattttggcagcatggatgttagcaggtctt
gctcactggtgccaggcagatgtgattattatttcaacactaaccaataaaacatttacg
gcagttggggatcttcctgcactatttggaccacctattcctctaacaggcttcaagggt
tatgcaatttatgtgacgcctcctgatgcatgctcgaaggtacgaccaccaccaaagtcc
aagaatattactggaccgtggattggaattgtgaagagatacaactgtgcattcgttgag
aaagtactaaatactcaaattgccggctatgatgctgttattgttcacaatgttggttca
aattccatacagcccatgggttccgacaaccaaagtttgtcagagaaagtgaatatacca
tcagtcttcattgggcaagatgatgcatttatgattattgaaaacttcctctatgataaa
gggtacattctggagataactgatgaccttcccttcaacctacaaaactacttggtaccc
tttgccatcaccattggtatctgcttcatagttatgctcacgtttatggttgtgaaatgt
gtccgtgattaccggcgctctcgtcgtcatcgtctgtcatccagagcacttaaaaagctt
cccgttcataaattcaagaaaggagacccgtacgaatgctgtgccatttgcttggaggat
tatgtagataatgataaactacgtatactgccttgcgaacatgcctatcatgcaaagtgc
attgacccatggttgacgaagaatcgtcgtgtgtgtcctgtatgcaaacgaaaagtgttt
acgggggacgagaggccctccgatctggaaacagactcggaggatgagaatagccctttg
atcaactctgaaggtggcacacaagggggcacattcgacagtcagagggaaaatcctttc
caagaagcccaacgactagcagacgaacgcaggagaaggcgtaggcttagaagaaatgtg
tcccacaatgtggaatgtggaccggaaggctatcaacgtttggccgagtccacagatgac
gaggagggggagggggaggagggtgaggatgaagaggaacaaagagaagaagaaaaaaat
gaagtctctggaaacagcgcccaggttgtaagtggtagcccggaacacgcagtctgtgag
ggggaggttaattctccccagtcgtcacaagagccgccagctacagtttgtgtcattgtt
cacgactctcccagacctatcagcattagagattcaagcagcttgtcgaggaatagcagc
ttatcctcccacggcacccctcctggtcctgtacaaattgctgttgatgttgtcaactcc
ccagcgtctggctcctcactagtgccacaaccttctcagtcatatggagatgcaggatct
gaacgcgattatgttgtgtga
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