Procambarus clarkii (red swamp crayfish): 123774958
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Entry
123774958 CDS
T07930
Symbol
Chc
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04142
Lysosome
pcla04144
Endocytosis
pcla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123774958 (Chc)
04142 Lysosome
123774958 (Chc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
123774958 (Chc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123774958 (Chc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcla04147
]
123774958 (Chc)
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
123774958 (Chc)
Exosome [BR:
pcla04147
]
Exosomal proteins
Proteins found in most exosomes
123774958 (Chc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
HEAT_Nup120
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
123774958
NCBI-ProteinID:
XP_045625618
LinkDB
All DBs
Position
10:complement(53265622..53304792)
Genome browser
AA seq
1677 aa
AA seq
DB search
MTQMLPIRFQEHLQLTNVGIQASNIGFNTLTMESDKFICVREKVGETAQVVIIDMADPTN
PIRRPISGDSAIMNPASKVIALKAQKTLQIFNIEMKTKIKAHTMDTEIQFWKWISTNKLA
LVTETAVYHWSMDGDAQPQKMFDRHSSLNGCQIINYRADSKQNWLLLIGISAQQNRVVGF
MQLYSIDRKASQPIEGHAAGFTSFKMEGNAEHSTLFCFAVRNAQGGKLHIIEVGQPAAGN
QPFTKKNVDVFFPPEAQNDFPVAMQVSSKHDVIYLITKYGYVHLYDIESGTCIFMNRISG
DTIFVTAPHEPSSGIIGVNRKGQVLSVSVDEENIIPYINNVLQNPDLALRIATRNNLAGA
EDLFVRKFNTLFQNGQYSEAAKVAANAPKGVLRTPQTIQRFQQVPAQPGQTSPLLQYFGI
LLDQSHLNKFESLELCRPVLAQGRKNLLEKWLKEDKLECSEELGDLVKQADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDYVFLLRNVMRVNPDQGLAFAQMLVQDD
EPMADVNQIVDIFLESNLIQQCTAFLLDALKNNRPTEGPLQTRLLEMNLMSAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDMYDIKRAVVHTQLLNPEWLVNYFGSLSV
EDSLECLKAMLTANLRQNLQIVVQIATKYHEQLTTNALIDLFESFKSFEGLFYFLGSIVN
FSQESEVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCAEDVIKQLIMVVRGQF
STDELVEEVEKRNRLKLLLTWLESRIHEGVSESATHDAIAKIYIDSNNNPERFLRENQNY
DSKVVGKYCEKRDPHLACIAYERGQCDRELINVCNENSLFKSEARYLVRRRDPELWAEVL
QETNQYRRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDNSAFSD
HRNLQNLLILTAIKADHTRVMDYITRLDNYDAPDIANIAIGNQLYEEAFAIFKKFDVNTS
AIQVLIEHIVNLDRAYEFAERCNESAVWSQLAKAQLQQSLVKEAIDSFIKADDPTAYIDV
VDTAHRTGHWEDLVRYLVMARKKARESYVESELCYAYSKTNRLADLEEFIAAPNHADIQK
IGDRCFDDGMYEAAKLLYNNVSNFARLAITLVHLKEFQGAVESARKANSTRTWKEVCFAC
VDNEQFRLAQNCGLHIVVHADELEDLINYYQDRGYFDELINLLEAALGLERAHMGMFTEL
AILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVLTMMA
HPTEAWRESHFKDVITKVANIELYYKAIQFYLDYKPMLLNDLLLVLSPRMDHTRAVNYFT
KANHLKLVKGYLRSVQSLNNKAINEALNSLLIEEEDYTGLRTSIDAFDHFDNIALAQSLE
KHDLIEFRRIAAYLYKGNNRWKQSVELCKKDKLFKDAMEYAAESKNSDTAEELLQWFLEN
GNFDCFAACLFHCYDLLHPDVILELAWRHNIMDFAMPYLINVMREYVTKVNKLEDIEKHR
SEENETNESKPMMNMIGEPQLMITAGPGMMGPGYSNAGYANNINYGAGMPSYQGYSM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaatgttacctataagattccaagagcacctacagctcaccaatgtggggatt
caagcatccaacattgggtttaataccctcaccatggaatctgacaagttcatctgtgtc
agagagaaagtcggagaaaccgcacaggtagtgattattgacatggctgatccaaccaac
cccatcagacgtcccatctcgggagattccgcaatcatgaatccagcatctaaagttatt
gctcttaaagctcagaagacactgcagatattcaatattgaaatgaaaaccaaaatcaaa
gctcatacaatggatacagaaatacagttctggaaatggatctccaccaataagctggca
ctcgtgactgagacagctgtctaccactggagtatggatggagatgctcagccacagaag
atgtttgatcgtcatagcagtctaaatggttgccaaattataaactatcgtgcagattct
aaacagaactggctgttacttattggtatctctgcacagcaaaatcgtgtagtgggattc
atgcagctgtatagtatagacaggaaagctagccagcctattgagggtcatgctgcaggt
tttacatcatttaagatggaaggtaatgcggaacactcgaccctattctgctttgctgtg
cgcaatgctcaaggtggcaagttacacattattgaagttgggcaacctgcagctggcaac
cagccttttacaaaaaagaacgtagatgtgtttttcccacctgaggcacagaatgacttt
cctgtggctatgcaggttagttcgaagcatgatgtcatctatttgatcacaaagtatggt
tatgtgcacctttatgacattgagagtggaacatgtattttcatgaaccgcatcagtgga
gataccatctttgtcacggcgcctcacgaaccctcaagtggcatcattggcgtcaaccgt
aagggacaggtattaagtgtgagcgttgatgaagagaacatcatcccttacatcaataat
gtgcttcaaaaccctgacttggcacttagaattgcaacaaggaacaaccttgctggagcg
gaagatctgtttgtgcgcaagtttaacacacttttccagaatggacaatacagcgaagca
gccaaggtagctgctaatgcacccaaaggtgtcctccgtaccccccaaactatccagagg
ttccaacaagtgccagctcagcctggccagacttcgcctcttcttcagtacttcggaatt
ctcctcgatcagtctcacttgaacaagtttgaatccttagaattgtgtagaccagttttg
gcccaagggcgcaagaatttacttgaaaaatggctaaaagaagataagttagaatgttca
gaagaattaggtgatcttgtgaagcaggctgatcccacattagcactttctgtgtacctg
agagcaaatgtaccaaacaaagtgattcagtgctttgctgagactggccagttccagaag
attgtactttatgctaagaaagttggatacactccagactatgtattcttgttaagaaat
gtgatgcgtgttaatccggatcaaggtcttgcatttgctcagatgttagtacaggatgat
gaacccatggctgatgtcaaccaaattgtggatatttttttggaatcaaatttaattcag
cagtgtacagcgttcttgcttgatgctctgaagaataatcgtcccacagaagggccactt
cagactcgcctcttggaaatgaacttgatgtctgccccgcaagtagcagatgcaattctc
ggtaaccagatgttcacccattacgatcgtgcacacattgctcaactgtgtgagaaggca
ggattgcttcagcgtgccttggaacactacacagacatgtatgatattaagagagcagtt
gtgcacacacagttgctgaacccagagtggcttgttaactattttggctctttatctgtt
gaggattctttagagtgcttgaaggcgatgcttacagccaatctccgccagaatctccaa
atcgtggttcagattgctaccaaataccatgagcaactaacgaccaatgcactgattgat
ctgttcgagtctttcaagtcatttgaaggcctcttctattttcttggatcgattgtcaac
ttctcacaagaatctgaagttcatttcaagtacatccaggcagcttgtaaaactggccaa
attaaagaggttgagagaatatgccgcgagtccaactgctataatcctgaacgcgtgaag
aacttcttgaaggaggcaaagctaactgatcagttaccactcatcatcgtttgtgatcgc
tttgacttcgtccacgacctggtgctctacctctaccgcaataacctacagaaatacata
gaaatatatgttcagaaggtgaatccttcacgtctacctgtcgtcgttggagggctgctg
gacgttgattgtgccgaggatgtaataaaacaattgattatggttgttcgtggacagttc
tcaacagacgagttggtggaagaggttgagaaaagaaaccgcctgaagctgctgctaact
tggctggagtcacgtattcatgaaggagtctctgagtcggccactcatgatgccattgcc
aaaatttacatagactccaacaataaccccgagagattcttaagggagaaccaaaactat
gacagcaaagttgttggaaagtactgtgaaaagcgagacccgcaccttgcatgtattgca
tacgaacgtggtcaatgtgacagagaactgattaatgtttgcaacgagaactctctcttc
aagtctgaagctagataccttgtgaggcgacgggaccctgaactctgggctgaggttcta
caagagaccaatcagtacaggagacaacttattgaccaggttgtgcagacagcattgtca
gagacccaagaccccgaggatatctctgttactgtgaaagctttcatgactgctgatttg
cccaatgaacttattgaactcttggaaaaaattgtgcttgacaattctgcattcagtgat
cacaggaaccttcaaaatcttctcatcttaactgctataaaggcagaccacacccgtgtg
atggactacattactcgccttgataactatgatgcaccagatattgccaacatagccatt
ggcaaccaattgtatgaagaggcctttgctatattcaagaagtttgatgtaaacacctct
gccattcaggttctgattgagcacatagtgaacctggaccgggcatacgagtttgccgag
cggtgcaatgaaagtgctgtgtggagtcagttggccaaggctcagctgcaacagtcattg
gtgaaagaggcaattgactcattcatcaaggcagatgacccaactgcatacattgatgtt
gtggacactgcacacaggacaggtcattgggaagacttggttcggtacctggtcatggca
cgtaaaaaggctcgggaatcgtatgtggagagtgagctgtgttatgcttattccaaaacc
aacagactagccgatcttgaggaatttattgctgctcctaatcatgctgatattcagaag
attggcgaccggtgctttgatgatggcatgtacgaagcagcaaaactcctctacaataat
gtcagtaactttgctcgtctggcaatcacgcttgttcacttaaaggagttccagggagct
gtggaatctgccaggaaagccaacagcacaagaacgtggaaagaagtatgcttcgcatgt
gtggacaatgaacagtttcgtttggctcagaattgtggccttcatattgttgttcatgca
gatgaactggaagatctcatcaactattaccaggatcgagggtattttgacgagttaatc
aacttgctggaggcagctttgggactagaacgtgcacacatgggtatgttcacagaactt
gccattctttactcaaagtacaagcctgagaagatgcgagaacatcttgagctcttctgg
tctagggtcaacattccaaaggtgttacgtgcagcagaacaagcacatctatgggctgag
cttgtattcctgtatgacaagtatgaagagtatgataatgctgttctcaccatgatggca
caccctacagaagcctggcgagagtctcacttcaaagacgttatcacaaaagttgcaaac
atcgagttgtattataaagctattcagttttacctggattacaaaccaatgcttctaaat
gacctgctgctagttctctcacctaggatggaccatacgagagcagtcaattacttcaca
aaggcaaaccatttaaaattggtcaaaggttacttaagatcagtgcagtcactaaataac
aaagctatcaatgaggctctcaactctttactcattgaagaagaagattacacaggctta
aggacttccattgatgcttttgaccactttgacaacattgctctggctcagtctctggag
aagcacgatttgatagagttccgtcggattgctgcatacttgtacaaaggcaacaacagg
tggaaacagtctgtggagctgtgcaaaaaggataaactctttaaggatgccatggagtat
gctgctgaaagtaagaactctgacactgcagaagagctccttcagtggttccttgagaac
ggcaactttgattgctttgctgcttgcctgttccattgttatgatcttctccatcctgat
gtaatattagaattggcatggaggcataatatcatggactttgccatgccttatttgatt
aatgtaatgcgagagtatgtcacaaaggttaacaaacttgaagacattgagaagcacagg
tctgaagaaaatgaaactaatgagagcaagcctatgatgaatatgattggtgagcctcag
cttatgatcacagctggcccgggcatgatgggaccaggctactccaacgctggttacgct
aacaacattaactacggtgctggcatgccatcctaccaaggttacagcatgtaa
DBGET
integrated database retrieval system
