Procambarus clarkii (red swamp crayfish): 123775026
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Entry
123775026 CDS
T07930
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123775026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123775026
Enzymes [BR:
pcla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123775026
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
123775026
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
123775026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH_3
NTP_transf_2
HHH
Cdd1
MG3
Nitrophorin
Motif
Other DBs
NCBI-GeneID:
123775026
NCBI-ProteinID:
XP_045625735
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All DBs
Position
92:13213473..13226341
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AA seq
332 aa
AA seq
DB search
MSKRKHPSSAGNPNASICDLLLEIAEYEKNVNRNTYKYNAYRNAAAALAQHPTRIESGSE
AKKLKGVGSKIGEKIDQYIKTGQMSKVEKIRGDDTNTAINLLTRVSGIGPAKARELVDEG
ITTLEDLRKNQDKLNHHQVIGLKYFDEFEMRIPRDEVEKIEKQLNKLITTHDSDYLITIC
GSYRRGAKSSGDVDALLTHPSYTSESSKCPSLIKNVVETLKDNGLVTDTLSQGDSKFMGV
FQLEENLPHRRLDIRLLPHDQYYCGILYFTGSDMFNKAMRAHALEQGFTLNEYCIRPIGS
TGVPGEALPVSCEKDIFEYINYKYKEPYERNA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaacacccatccagcgctggcaaccccaatgcttccatctgtgatctc
ctcttggaaattgctgaatatgagaaaaatgtaaaccgcaacacatacaagtataatgcc
tatcgcaatgccgcagctgctcttgctcaacacccaactcgaattgagagtggaagtgaa
gcaaagaagctcaagggtgtgggatccaagattggggagaagattgatcaatacatcaag
actggtcagatgagtaaagtggagaagattcgtggtgatgatacaaatactgcaattaat
cttctaactcgtgtgtctggcattggcccagccaaagcacgcgagctagttgacgaaggt
atcacaaccctagaagatctgcgtaaaaatcaagataagcttaatcaccatcaggtcatt
ggactgaagtactttgatgaatttgagatgaggattcccagagatgaagttgagaaaata
gagaagcagttgaacaagctcatcaccactcacgactccgattatcttattacaatctgt
ggcagctatcggcgtggagccaaaagcagtggtgacgtggacgctttactgacccatcca
tcctatacttctgaatccagcaagtgtccttcactgattaagaatgtagtcgagacactg
aaggacaatggtctggtgacggacactctctcccagggcgactctaaattcatgggtgtg
ttccagctggaggagaacttgcctcaccgccgtcttgatatccgacttttgccccacgac
cagtactattgtgggatcctctacttcaccgggtcagatatgttcaacaaggctatgagg
gcacatgctttagaacaaggctttactctcaatgaatactgcatcagacctattggcagc
acaggtgttcctggtgaggcattgccggtgtcatgtgaaaaagatatatttgaatacata
aactataaatacaaggaaccttatgaacgcaatgcatag
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