Procambarus clarkii (red swamp crayfish): 123775067
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Entry
123775067 CDS
T07930
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcla01002
]
123775067
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123775067
Enzymes [BR:
pcla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123775067
Peptidases and inhibitors [BR:
pcla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123775067
Ubiquitin system [BR:
pcla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123775067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
123775067
NCBI-ProteinID:
XP_045625831
LinkDB
All DBs
Position
LG81:5892294..5966176
Genome browser
AA seq
2663 aa
AA seq
DB search
MTIAMIANQDPQEGPPNTPPQGGDGEVLGEGEGEDLGGGEPDFPLADLARLDEMIHRQRW
VVPVLPKCELELLLEASIDLCTRGVDTRSEACQRFFREGLTISFTKILTDEAVNSWKFEI
HRCILKNCEKLIELVVVKLHQDWFPLLDLLAMVLSPNSKFHTFNGTRPSETVPQGSQIPD
YELFARPPDPRNPRGWLVDLINLFGKLGGFQILLERFQSGKNLSVPVICALLRPFGLCFE
MLTVPTIEKYFMPIVEVVPAFLENLTDEELKKEAKNEAKNDALSAIIKAIKCLVSRVPSQ
EETAKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVITNVSYYSHRHGPVEEEEWLTAE
RMAEWIKENRVLQIVLRDSLHQPQYVEKLEKIIRFIIKEKALTLEDLDDIWAAQHGKHEA
IVKNVHDLLAKLAWDFSPEQLDHLFGCFQTSWSQASKKQREKLLELIRRLAEDDKDGVMA
HKVLTLLWSLAHSDDVPTEIMDQALNAHVKILDYSCSQDRDIQKKHWLDRCVEELKHDKW
VLPALKQIREICCSYSEAPPNFSQHQRPTPHVSYRHDIISKLQNQHSLVVLVADNLTTYM
KNIRIAAKENPDLNPADIIPDRRYNHIYQVQERLSFLRFLLKDGQLWLCAPQAKQIWNCL
AESAVFTVDRESCFKWFSKLMGDEPDLDPEINKDFFENNILLLDPSLLTENGMKCFDRFF
KAVNSKEGKLVLKRRVYLMDDDDLIGVDYVWRVVLCGTEDIACRAIELLRETYTNLGPRL
QANQVIIHDDFLSSCMSRLKAMYDTVSVLDQDKDSINRVRQETTRMCRVIKVLYEYVSEC
DGDFGDDRSILPLGRASRGKHLSLLVRFPVQGRQPDEIDVWTHTNDTMGSIRRQVLHRLK
STAPNVKVELYLNTDPIDPLDDKKIIAHMPLRDKMILTAKLVQVGSNMPSSPDSSSDSST
GSPQHPYEGPNVEAENCLPGVIMSGQAKYTQFLLQLADLGCTLQLAQLRDSARALLNIMP
ADQYAANNLRKICMEHAKIGEQSMAPSLESIVFSSSPSQVLYNLQVLYSLLMPAHNPMAE
KALEFQYNFMKSGGVKLIIDMLAKNNFLSNTDMPTKRSAFLVVLKLAKLAFVTVGYAIVS
VVTSSNTTTTTNSNGGTEDISPPSTGTSNLSASTHTQALVLQEALHHIPNPASDCMVRNV
ASRLAQSLHDQVTITSCLWAHFVTGVVPDMSVVRSILKITWASAAGQVHLITSSLDEIEK
ASERPPTKPPDPEDLQVCREGLETLSVVLALYPPALETLTKDSQFHKLVMGLVLVGGERS
IRQCAVEQLLLMATKCSNSPHTLVVFIVMLFNVLNGLNGEYSKEYFQLLCGLLNWACVSS
VAVTGVDRLLTTEVEWLKNVRASVAQMAQGGPEPPVDDTLLEGHLCVTRELVAFLPPEKK
YEIGGDPSKSIFLIKELVEDFIFPFSKVYLQLEHAAEMPAEQAIPVCSTQPTVIAAYELL
VTLCTGCVPNLKLLAEMLTNMYYSDCDESIGEWEYLPPVGPRPVKGFVGLKNAGATCYMN
SVLQQLYMIRQIRHGVLLVEGAATDPEEDFSGEERMEQETNLDGNEDDAMSSSSNEESRK
EYHIGILKQVQAIFAHLACSKLQYYVPRGLWKHFKLQGEPVNLREQHDACEFYNILVESL
NEALKALGHDQIMNKILGGSYSDQKICKTCPHRYSREETFTVISIDIRNYSNLYDSLEQY
VKGDLLEGDNAYLCEKCDKKVDTVKRICLKKLPPIMAIQLKRFDYDWERECSIKFNDYFE
FPRELDMDPYTVAGLARNGELIDYDPEDMKTVVCSKYKLTGIVVHSGQASGGHYYSYILH
RNGNDQRWYKFDDGEVSECKMDDEDEMKNQCFGGEYMGEQVFDNIMKRVSYRRQKRWWNA
YLLFYTRLDVEEDNLSNSMSELTLAERPGLIKMPSAIDRSVVRQNVRFMHSRSQFSPEYF
QFLKKLIMTNHTFVLQPPQDRVAESEEIAMISTQLCSKFLFSVGLHTKKTLRGPAPEWYD
ALQVHLRASVHTRAWFAQHVLFTQPHRFMEYLLECPAPEVRMVFSKLIVLVGHCARNDPP
QPLGWGPLKHHPGLDISGGGCTLSDQLVVAVLLLLNKEVSEHGRHLTQYFHLFHLYASLG
PPEKLQLLKLNVVEMFMLVALDEGPGPAIKYQYAELGRLYQVVSQLIRSCDVSQKQQSSQ
QNTTPLPNPHGDTSCPEPLMPIQPKVAEILYGRATYVKKIIEDANNSEDTVKLLKFCCWE
NPLFSSTVLSELLWQIAYSYTYELRPYLDLLLHMLLLDDSWQNHRIHNALKGIPDDREGL
FDTIQRSKNHYQKRAYQCIKCMVALFTSCLAAQQMLHSNGDLKRKWTWAVDWLNDELDRR
PYAANQQYGFNNWSPPAQSNETSNGYFLERSPSARSTLEKAYELCPEDEPEPEECEEAEV
AVPEEVAPLPPGSEPGQPQQPQPQQQQPGLQTQPPQQQPQQQPQQQAPQQPQQQKLPPTS
GPQPSSSQLNFTTKDSPASSQNRSHSGGSVTVSSSSGSSSGNTEASTALNSPTTIPTTAT
TATTCLVGTPSTSTTMAVNATSTPGGPQSTITNANITSTSSSSSTCSTINSSTSSTGGPN
KTTPSPQLTPNSQPSVQDSTQEN
NT seq
7992 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgctatgatagccaatcaggacccacaggaggggccacctaacaccccacca
cagggtggggatggagaagtgttgggtgaaggggagggggaggatttgggtggtggggaa
ccggactttcccctggctgacttggcccgactagacgagatgatccaccgtcaaagatgg
gtggttccagtcttgcccaagtgcgaactggaactgttgctcgaagcctccatcgatcta
tgtacacggggtgtagatacaaggagtgaagcatgtcagagattcttcagggaagggttg
acaatttcttttactaaaattctcactgatgaggctgtgaacagctggaagtttgaaatt
catagatgcatcctaaagaactgtgagaagttaatagaattagttgtagtgaaactgcac
caggactggtttcctttacttgaccttcttgccatggtgctcagccctaattccaagttt
catacgtttaatggaacacgcccttcagaaacagtaccacaggggtcacagatcccagac
tatgaactgtttgcccgaccacctgatcccagaaatcccagaggttggctggtcgacctt
atcaacctttttggcaagcttggtggctttcagatcctcctagaaagatttcagtcgggc
aagaatctttctgttcctgtaatatgtgcactcttacgaccatttggcctctgctttgag
atgctcacagtacctactatagagaaatacttcatgcctattgtagaggtagttccagcc
tttctagagaatcttactgatgaagagttgaagaaagaggccaagaatgaagccaaaaat
gacgcgctttctgccatcatcaaagccataaagtgcctggtatcccgagtgcccagtcaa
gaagagactgccaaaaatcttgagatttttagactaaaaatgatactcaggttattgcaa
atttcatccttcaatgggaagatgaatgccttgaatgaggtaaataaggtgatcacaaac
gtgtcctattactcacatcgtcatggacctgttgaagaggaagaatggttaactgcagaa
cgcatggcggagtggatcaaggaaaaccgtgtactgcagatagtgcttagagattccctt
caccaaccgcagtatgttgagaagttagaaaagattatacgcttcatcatcaaggaaaaa
gctttgacactggaggatttagatgacatctgggcagcacagcatggaaaacatgaagct
attgttaaaaatgttcatgacctcttggccaagcttgcatgggatttttcacccgagcag
ctggatcacttatttgggtgctttcagactagctggagccaggcaagtaaaaaacaacgt
gagaagctcctagagttaatacgcaggttagcagaagatgacaaagatggagttatggca
cataaggttttaacactactgtggtcattagcccattcagatgacgtaccaacagagata
atggaccaggccctaaatgctcacgtgaagattttggattattcctgctcgcaggaccga
gacattcagaagaaacactggcttgaccgatgtgttgaggaactcaagcatgacaaatgg
gtgcttcctgctctaaagcagatacgagaaatatgttgttcctatagtgaagcaccgccc
aatttttcgcagcatcagcgccctactccacatgtcagctaccgtcatgatatcatctcc
aaactccaaaatcagcattctcttgtggttcttgtagctgataatctcacaacttatatg
aagaatattagaatagctgcaaaagaaaatcccgacctgaatccagcggatattattcct
gatcggcgatataaccatatataccaagttcaggagcgacttagttttcttaggttttta
ctaaaggatggtcagttatggctgtgtgcaccccaggccaagcagatttggaactgtcta
gcggagagtgctgtatttactgtagatagagagtcgtgtttcaaatggttttccaagtta
atgggtgatgagccagaccttgaccctgaaatcaacaaggatttttttgaaaacaacatt
ttgctgcttgacccatcgttgttgaccgagaatggcatgaaatgttttgatcggttcttt
aaagctgttaactccaaagaaggaaaactggttctgaaaaggagagtttaccttatggac
gatgatgaccttataggtgtagattatgtctggcgagtagtattgtgtgggacggaagat
attgcatgccgtgccattgaactattgcgagagacgtacacaaatcttgggccaaggctt
caagccaatcaggtcatcatacatgatgacttcctctcaagttgtatgtctcggcttaag
gcaatgtatgacactgtatcagtgttagatcaagataaggattctattaatagagttcgg
caagaaactacaagaatgtgtcgggtcattaaagttttatacgaatatgtttcggagtgt
gatggtgactttggtgacgacagatctattctacctcttggaagagcatcaagagggaag
catttgtcacttttggtgaggtttcctgtacaaggtcggcagccggatgagattgatgta
tggactcacacaaatgacacgatgggctctataagaagacaagtacttcaccggttgaaa
tctactgctccgaatgtaaaagtagagctttacttgaacacagatccaatagaccctctg
gatgacaaaaagatcattgctcacatgcctctcagagataaaatgatattaacagccaag
cttgttcaggtgggaagcaatatgccatcgtccccagacagctcttcggactcttcaacg
ggctctcctcagcacccatatgaaggacctaatgtagaagctgaaaattgtcttcctggt
gttataatgtccggtcaagccaaatacacgcagtttcttcttcagttagctgaccttggc
tgcaccttacagttagcacagttaagggacagtgcacgggcactgctcaacatcatgcca
gctgaccagtatgccgctaataatctccggaaaatctgtatggagcacgcaaagattggg
gagcagagcatggcaccttcattggagagcattgtgttttcatcatcgccatcacaggtt
ctctacaatttacaggtactctactcccttttaatgcccgctcacaaccccatggcagag
aaggcactagagttccagtataatttcatgaagagtggaggtgtcaaactcattattgac
atgctagccaaaaacaacttcctgtcaaatactgacatgccaacaaaacggtcagccttc
ttggtggtgttgaagttggcaaaattggcatttgtgacagtaggttacgctattgtaagt
gttgtcacgtctagcaatacgaccaccaccacgaacagtaatggtggaactgaagacata
tcgccgccttcaactggtacgagtaacttgtcagcctcgactcatactcaagctctagtg
ctacaagaagctctccaccatattcccaaccctgcctcagattgtatggtgcgcaatgtg
gcatcccgtctggctcagtcacttcacgaccaggtcactatcacgtcatgcctctgggca
cactttgttacaggtgtagttccggatatgagtgttgttagatctattctcaaaataacg
tgggcgtcggcggcaggacaagtccatcttataacatcgtctctcgatgaaattgagaaa
gcatccgaacggccaccaactaaaccgcccgatcccgaggacttgcaagtgtgtcgcgaa
ggtttggaaacattgtctgtggtgttggccctttaccctcctgccttggagactctgacc
aaggactctcagttccacaagctggtgatggggttggtgctagtgggcggggagcggagt
attcgacagtgtgcggtggaacagttgttgctgatggccaccaagtgttccaattcccct
cacacccttgtggtcttcattgtcatgctcttcaatgttcttaatggccttaatggcgag
tattccaaggagtatttccagttgctgtgtggattgttgaactgggcgtgtgtgtcaagc
gtggctgtgacgggcgttgatcgcctgttgacgacagaagtggaatggttgaagaatgtg
cgagccagtgtagctcagatggcccaaggtggcccagagccccctgtagatgacacacta
ctggagggccatttgtgtgtcacacgggagctggtagccttccttccacctgagaagaaa
tacgaaattggtggagacccttctaaatcaatatttctaattaaggaacttgtagaagac
tttatattcccattttctaaggtgtaccttcaattggagcatgcggccgagatgcctgct
gagcaggccataccagtgtgctcaactcaaccaactgtgatagcagcatatgaactccta
gtcactctatgtacaggctgtgttcccaacctcaaacttttagcagaaatgctcacaaat
atgtattattcagattgtgatgaaagcattggggaatgggaataccttcctccagtcggc
cctcggcctgtgaaagggtttgtagggctgaaaaatgctggggccacttgttacatgaat
tctgtcctacagcagctctatatgataagacaaataaggcatggtgtattactagtagaa
ggtgcagcaacagatcccgaggaagacttcagcggagaagagagaatggagcaagagact
aatcttgatggaaatgaggatgatgcaatgagcagcagttcaaatgaggaaagcagaaaa
gaataccacataggaattctcaagcaggtgcaggccatctttgcacatttagcttgctct
aaacttcagtactatgttcccagaggtctctggaaacatttcaaattacaaggagagcct
gtgaacttgcgggagcaacacgatgcctgtgaattctacaatattttggtcgagagctta
aatgaagcgctcaaagctctaggacatgaccaaataatgaacaagattcttggtggttcc
tattctgaccagaagatctgcaagacttgtcctcacaggtactcgagagaggaaactttt
actgtcatcagtatagacatccggaactacagcaacctttacgattccctagagcagtac
gtgaagggcgatctcttggagggggataatgcgtatctctgtgaaaagtgtgacaaaaag
gtagacacggttaagcgaatatgcttgaagaagcttccaccaattatggcaatacagctg
aagagatttgactatgactgggaaagagagtgctcaattaaattcaacgactactttgaa
tttccccgagagttagatatggacccttatacagttgctggattggcaagaaatggggag
ctaatagattatgacccagaggatatgaagactgtagtatgcagcaagtacaagttgact
ggcatcgtagttcacagtggccaggccagcggtggccactattactcttatattctacac
aggaatggaaatgatcagcggtggtacaagtttgatgatggagaagtaagtgaatgcaaa
atggatgatgaagatgaaatgaaaaatcagtgttttggaggagaatatatgggcgagcaa
gtttttgacaacatcatgaagagagtgagctatcgacgacagaagcgttggtggaacgcc
tacctactcttctacacccggctagatgtcgaggaggataatctcagtaactcgatgagt
gaacttactttagcagaacggccagggttaataaaaatgccaagtgctattgaccgttcg
gtagtacggcaaaatgtgcgattcatgcactcccgctcccagttctctccagagtacttt
cagttcctcaagaagcttataatgacaaatcatacctttgtcctccaacccccacaagat
cgggttgcagaaagtgaggagattgccatgatcagtactcagctgtgcagcaagttcctc
ttctcagtaggtctacatactaaaaagactttgcggggcccagcaccggagtggtacgat
gcgctacaggtccatttaagggcatcagtccatacacgcgcgtggtttgcacagcatgta
ttatttactcagccacaccgctttatggaatatctactagaatgccctgcacctgaagtt
cggatggtatttagcaagctaatagtcttggtgggtcattgtgctcgtaatgacccacct
cagccattaggatggggacctttgaagcatcatccaggacttgatataagtggtggtggg
tgcactctgagcgatcagttggttgtggccgtgttgctgctgctcaacaaagaagtgtca
gaacatggtcgacacctaacgcagtacttccatctcttccatctctatgcctcgttgggg
cctccagaaaaattacaactgctgaagctaaatgtggtagaaatgtttatgttggtggca
ctggacgaggggcccggtccagccatcaagtaccagtacgcagagttggggcggttgtat
caggtggtttcacagttgataagatcgtgtgacgtttctcaaaagcaacagtcttctcaa
caaaatacaacacctcttcctaacccccatggagacacgtcgtgccctgaaccactaatg
cctatccaaccaaaagtagcagagatcctttatggccgagcaacatatgtcaagaagatc
attgaggatgcaaataattctgaagatacagttaaattactcaaattttgttgttgggaa
aaccctctcttctcttcaactgtgctatcagaactactttggcagattgcatattcctac
acatatgaactgcgaccataccttgaccttcttttgcacatgctattgctcgacgactcc
tggcagaatcatcgaattcacaatgcacttaaaggaattcctgatgaccgcgagggctta
tttgatacaatccagcgaagtaaaaaccactaccagaaacgagcgtatcagtgtataaaa
tgtatggtagcactcttcacttcttgtttggctgctcaacagatgttacactccaatggt
gatctaaagcgcaagtggacctgggctgtggattggctgaatgacgagttggatagacgt
ccgtatgcggccaaccaacagtatgggttcaacaattggtctccgccggcacagagcaat
gaaacgagtaatggttacttcttggagcgttcaccgagtgcacggtcgactttggaaaaa
gcttacgagttgtgtcctgaagatgaacctgaaccagaagaatgtgaagaagcagaagtt
gctgttccagaagaagtggctcctcttcctcctggatctgaaccagggcagccacagcaa
ccacagccacagcagcagcagccagggttacaaacgcagccgccacaacagcaaccacaa
cagcagccacaacagcaagccccacagcagccacaacagcaaaaattaccacctacctca
ggaccacaaccttctagttcacaactaaattttacaactaaagattctccagcaagcagc
cagaatagaagccatagtggtggatcagtaacagttagcagcagtagtgggagcagcagt
gggaacacagaggccagtactgctcttaactcccccaccaccattccaactacagccacc
acagccactacctgcctagtaggtacaccaagtactagtaccacaatggctgtcaatgct
accagtacgccaggaggaccacaatctaccatcaccaatgccaacattaccagcacgagt
agtagcagcagtacttgtagcaccatcaacagtagcaccagcagtacaggtggcccaaat
aagaccacgccatcccctcaattaactccaaattcccagccctcagtgcaggacagtacc
caggaaaactaa
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integrated database retrieval system
