Procambarus clarkii (red swamp crayfish): 123775109
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Entry
123775109 CDS
T07930
Symbol
Atg18a
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04136
Autophagy - other
pcla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123775109 (Atg18a)
04136 Autophagy - other
123775109 (Atg18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123775109 (Atg18a)
03029 Mitochondrial biogenesis [BR:
pcla03029
]
123775109 (Atg18a)
Membrane trafficking [BR:
pcla04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
123775109 (Atg18a)
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123775109 (Atg18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
BCAS3_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR35_TULP_N
VID27
Beta-prop_Vps41
PQQ
Beta-prop_EML
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
123775109
NCBI-ProteinID:
XP_045625940
LinkDB
All DBs
Position
92:complement(6274448..6322332)
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AA seq
552 aa
AA seq
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MQIHNSVEKCNKTRKKTRVGSGGGGWEDNVGVTALERRPFMQSLATSVGVVTSGVGVVTS
GVRTGIAGLMSLAAQGASDPSASGGVFSVNFNQDYSSLGVGTKVGYKLFSLNTVDKAEQI
CDNVNEDTCIVERLFSSSLVAVVSLSSPRKLKVCHFKKNSEICNYSYPNTILAVKLNRAR
LVVCLEESLYIHNIRDMKVLHTIRDTPPNPMGLCALSISNDNCYLAYPGSNTIGQVQIFD
AQNLQAKTMIPAHDSPLAAIAFNASGTKIATASEKGTVIRVFSVADGLRLHELRRGMKRC
ATIFSLAFSPDSLFLIASSNTETVHVFKLEEIKDTQRVVVEEQQGLMGWMSKAVTASASY
LPAPVTDMLSQGRAFATITLPFQGVRNICAIATIQKQPRVVVASTDGYLYIYNLNTNEGG
DCTLLKQHRLDGTGEGSSSSSESAAVPGPYPGAAKKTEPVNTTGGSYAGVVRGPSAGVMT
DHALLPSWLDHTPYYSSADHASLPSWLDPAPLPSWSDHLTIEADKLSEMAAACESPPKSV
LKFDDDSEFPPV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcacaatagtgttgagaagtgcaacaaaaccagaaagaaaacaagagttggc
agcggaggcggcggctgggaggacaatgtcggtgtaacagccctggaaaggcggccgttt
atgcaaagcctggcaacgagtgtgggcgtagtgacctctggcgtgggcgtggtgacctcg
ggagtaaggactggcatagctggcctgatgagtctggcagcacagggggcgtctgacccc
tcggccagcgggggggtcttctctgtcaacttcaaccaagactactcatcccttggagtt
ggaacaaaagttggctacaaattattttctctcaacacagttgataaagctgagcagata
tgtgacaatgtaaatgaagacacgtgcatcgtagaacgactcttctcaagtagtttggtg
gcagtagtcagtttatcttcgccaagaaagctaaaagtctgtcacttcaagaaaaattct
gaaatatgtaactacagttatcccaacaccatcttggctgtcaagctgaaccgtgcaaga
ttggtcgtgtgcttagaagagtcgttatacatccacaatatccgggacatgaaagtcctc
cacacaatcagagatactccacctaatcctatgggtctgtgtgctctctccatcagtaat
gacaactgctacctggcctacccaggttccaatacaataggtcaagtacagatctttgac
gctcaaaatttgcaagcaaaaacaatgattccagcgcatgacagtccactagctgccatt
gccttcaatgcttcgggtactaagattgctaccgcttctgaaaagggcacagtgattaga
gtgtttagtgttgcagatggactcagactacacgaattgaggcgtggaatgaaacgatgt
gccactattttctctttggccttttctccagattctctcttccttattgcatcatccaac
acagagacggttcatgtgtttaagctagaagaaattaaagacacgcaacgtgttgtagtg
gaggagcagcaaggtttgatgggctggatgagcaaagctgtgactgcttcggctagctac
ttgcctgctccagtgactgacatgcttagtcagggccgagcatttgccacaatcacactg
ccattccagggtgtccgtaatatctgtgccattgccacgattcaaaagcagccacgagtt
gtggtggcatcaacagatggatacttgtacatatataatctcaatactaatgagggtgga
gactgcacacttcttaaacaacataggttggatggaactggggaagggagcagttcgagc
agtgagagtgcagcggtgccgggaccataccctggggcggccaagaagacagaacctgtg
aacacgacgggaggcagctatgcgggagtggtgagggggccttctgctggagtcatgaca
gatcatgccctgcttccttcgtggttggatcataccccgtattattcgtcggcggatcat
gcctcgcttccttcgtggttggatcctgccccgcttccttcgtggtcggatcatctaacg
attgaggcagataagttgagcgaaatggctgcagcttgcgaatcacctccaaagagtgtc
cttaagtttgatgatgactccgagtttcctccagtgtaa
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