KEGG   Procambarus clarkii (red swamp crayfish): 123775127
Entry
123775127         CDS       T07930                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123775127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcla03041]
    123775127
   03036 Chromosome and associated proteins [BR:pcla03036]
    123775127
Spliceosome [BR:pcla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123775127
 Complex B
    123775127
 Complex C
   U2 SnRNP specific factors
    123775127
Chromosome and associated proteins [BR:pcla03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123775127
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Adaptin_N UME DUF2298
Other DBs
NCBI-GeneID: 123775127
NCBI-ProteinID: XP_045625979
LinkDB
Position
92:complement(5023229..5040561)
AA seq 1322 aa
MAARKFTAEDVEAQIKDIQNRKANLAKETQLPEGLSKDEERVRLDGGGYFDSDIYDISNG
NKYANYVQSIGVDDLDDEDDDGGTTLGKKGGNAYTAPQLFLNEMVDKDHDPMAQYKRPTI
ADREDEYRARRIMQVIXPERIDPFADGGKTPDMNARTYAHIMQEARLKGEEALIRKTMQE
RSKEGTLQAVATNGEAPKAAPRKRGRWDQTADDTPQPKKKSTWEAETPSIARWDETPGRA
KGGETPGATPGQSTRMWDATPGHATPGHETPGHDKLTPSARRNRWDETPKTDRGETPGHN
SGWAETPRTDRGAGDLIQETPTPSASKRRSRWDETPAAQTPVATPSGALTPSTPHTPSMT
PGMMTPGAITPGGTTPVGPKAIGMATPSPGQLVNMTPEQIHAFRWEREIDERNRPMTDEE
LDALFPPGYEILPPPQGYVPIRTPARKLTATPTPMMGTPQGFFMQKEGMTPKHEDSQPKG
NLPLLKPEDAQYFDKLLQDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDK
AREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLL
IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIP
SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR
TITALALAALAEAATPYGIESFDSVLKPLWRGIRQHRGKGLAAFLKAIGYLIPLMDGEYA
DYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPGYIKEEILPHFFKHFWNHR
MALDRRNYRQLVDTTVEIANKVGTSEIVNRIVDDLKDENEQYRKMVMETIEKIMANLGAA
DIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNALGSRVKAYLPQICGTILWRLNN
KSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKGIVN
VIGMHXMNPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSPREWMRICFEL
LELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAET
CSPFTVLPGLMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTSLLEDALMDRDL
VHRQTACAAIKHMAIGVYGFGCEDAMVHLLNYVWPNIFETSPHLVQAFMDSIEGLRVALG
PQKILQYVLQGLFHPARKVRDVYWKIYNNLYIGAQDALVAGYPRIMNMGSNVYTRDELDI
IL
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggccgctcgcaaattcacagcggaagatgttgaagcccaaatcaaagacattcaaaac
cgaaaggccaatctggccaaggaaacacaactgcctgaaggactgagcaaggacgaggag
cgtgtgaggctcgatggtggaggctacttcgacagtgatatttatgatatttcaaatgga
aataaatatgcaaattatgttcagtctattggtgtggatgacctggatgatgaagatgat
gatggagggaccaccttggggaagaaggggggtaatgcatacacagccccccagctcttc
cttaatgaaatggtcgataaagatcatgaccctatggctcagtacaagaggcccaccatt
gctgacagagaagatgaataccgtgctcgccgtattatgcaggtcattntccccgagcgc
attgacccgtttgccgatggagggaagacaccagacatgaatgcccgcacctatgcccac
atcatgcaggaagcacgtctcaagggagaagaagcactaattcggaagacaatgcaagaa
cgttcaaaagaaggaactctccaggctgtggcgaccaatggtgaggctccaaaagctgcc
cctagaaagcgcggtcgttgggatcagacagctgacgacactcctcaaccgaagaagaaa
tcgacttgggaagcggaaactccatccattgctcgttgggatgaaactcctggtcgagct
aaggggggcgaaacacctggagcaactcctgggcaaagtacccgcatgtgggatgctacc
cctggacatgctacccctggtcatgaaactccgggtcatgataagttgacaccctctgct
cgtcgaaatcggtgggatgaaactccaaaaacagatagaggagaaactccaggacacaat
agtgggtgggccgagactcctcgcactgatcgtggagctggtgatcttattcaagaaacc
ccaactccaagtgcaagcaagcgacgttcaaggtgggatgaaactcctgcagcacagact
ccagttgccacaccatcaggggctttgactccatccacaccccacactcctagcatgact
ccaggaatgatgactccaggtgctatcaccccaggaggaacaacaccagtaggacctaaa
gccattggaatggcaacaccatcacctggacagctggtgaacatgactcctgaacagatt
catgccttccgttgggagagagaaattgatgaaagaaatcgccccatgacagatgaggaa
cttgatgcattgtttccaccaggatatgaaattctaccccctccacagggatatgtacct
atcaggacaccagcccgtaaactcacagcaacgcctacacctatgatgggtacaccacaa
ggctttttcatgcagaaagaaggcatgactcctaaacacgaagattctcagccaaaggga
aatcttccattgctaaaacctgaggatgcacagtattttgataagctacttcaggatgtt
gatgaggaaagcttgagccctgaagaacagaaagaaaggaaaattatgaaacttttgttg
aagataaagaatggtacaccacctatgcgtaaagcagctctccgccagattacagataag
gcccgtgagtttggtgctggtcctctgttcaaccagatcttgccacttctgatgtcccca
acactggaagatcaagaacgccatcttctggttaaagtcattgacagagttctctacaaa
ttggatgatcttgttcgtccttacgttcacaaaattttggtggttattgaacctttgctt
attgatgaagattattatgctcgtgtagaaggccgtgaaattatcagtaatttagccaag
gcagctggtttagcaacaatgatttccacaatgaggcctgatattgacaacatcgatgaa
tatgtacgtaatacaactgctcgagcttttgctgttgtggcatctgctctaggtattcct
tccctcttgccattcttaaaagctgtgtgcaaaagcaagaaatcttggcaggctcggcat
acaggcatcaaaatagtgcagcagattgccattttaatgggttgtgctatattgccccac
cttcgttctcttgtggaaattattgaacatggtctagttgatgagcagcaaaaagtacgt
acaatcactgctttggctttagcggctctggctgaagctgctactccatatggtattgag
agctttgattctgttttgaaacctctgtggcgtggtatccgtcagcaccgaggaaaaggt
cttgctgccttccttaaagcaattggataccttattccacttatggatggagaatatgct
gattactacacaagggaagtgatgctgattctcatccgtgaatttcagagtcctgacgaa
gagatgaagaaaattgtgttaaaagtggtgaaacagtgttgtgccactgatggtgttgaa
cctgggtacattaaggaagagatcttgccacacttctttaagcacttctggaaccacaga
atggctcttgatcgtcgtaactatcgccagctcgttgacaccacggttgaaattgcaaat
aaggtggggacgtcagagatagtcaaccgcattgttgatgacctaaaggatgaaaatgaa
cagtaccgaaaaatggttatggaaactatcgaaaaaattatggcaaaccttggagctgcc
gatatagattcccgacttgaagaacaacttattgatggcattctgtatgctttccaagag
cagacaactgaagatgttgttatgctcaatggctttggcacaattgtgaatgcactagga
tctcgagttaaggcctacctccctcagatttgtggtacaattttgtggcgactgaacaac
aaatctgcaaaagtgcgtcagcaagctgcagatttgatatcccgcattgccgtcgtgatg
aaaacatgtcaggaagagaaactgatgggtcatttgggagttgtgttgtatgagtatctc
ggtgaggagtacccagaggtactcgggtctatcttgggcgccctaaaaggcattgttaat
gtcattggcatgcacnaaatgaatccacctatcaaggacctgttacctcgtctcactcca
attctcaagaacagacatgaaaaagtgcaagaaaactgtattgatttggtgggacgcatt
gcagatcgtgggccagagtatgtgagtcctcgcgaatggatgaggatttgtttcgagttg
ttagaacttctgaaggctcataagaaagccatcagaagagccactgtcaacacatttggt
tatattgccaaagctattggcccacatgatgtgttagccacactactaaacaatctcaaa
gttcaggaacgccaaaatcgtgtgtgcacaactgttgctattgccatagttgcagagaca
tgttcccctttcactgtcctgcctggacttatgaatgaatatagagttcctgagctgaat
gttcaaaatggtgttctgaaatctctctcatttctctttgaatacattggagaaatgggg
aaagattatatatatgctgtcacatccctgctggaagatgccctcatggatagagacctg
gttcacagacagactgcttgtgctgctatcaagcacatggctattggagtctatggattt
ggttgtgaagatgcaatggttcatctcttgaattatgtttggcccaatatatttgaaact
tctcctcacctggttcaagccttcatggatagcattgaggggcttcgtgtggcactagga
cctcagaaaattctacagtatgtactgcaaggactcttccacccagccagaaaagtacgt
gatgtctattggaaaatttacaacaatctttacattggtgcacaagatgcccttgtggct
ggatacccacggataatgaacatggggagtaatgtttataccagagacgaattggacatt
attctgtaa

DBGET integrated database retrieval system