Procambarus clarkii (red swamp crayfish): 123775186
Help
Entry
123775186 CDS
T07930
Symbol
l(2)10685
Name
(RefSeq) 5-methylcytosine rRNA methyltransferase NSUN4 isoform X1
KO
K21970
5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcla03009
]
123775186 (l(2)10685)
03029 Mitochondrial biogenesis [BR:
pcla03029
]
123775186 (l(2)10685)
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Other ribosome biogenesis factors
123775186 (l(2)10685)
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
123775186 (l(2)10685)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
DUF3684
Motif
Other DBs
NCBI-GeneID:
123775186
NCBI-ProteinID:
XP_045626098
LinkDB
All DBs
Position
92:complement(1515016..1568377)
Genome browser
AA seq
504 aa
AA seq
DB search
MLAVNKSRKQSRSLILYMQRRFKKKEKVPQITNIARAQEYFDRAYPPVYGPRWPSIRLAL
LSKQKYVAAVNNFANHENTIEKFQELGAVDIGHKCTMIAAQMRANKKEWDQQISQEHDED
TFQDHPEIEESKLIRPSLIELDDDELAAQAKAESIKRYPEEYRARALAKDYNPGTMELDH
TSRIILPSEVESRGVNVMMDYVPATKLKGLENWVEETDVFVDASHGDQEIGLKTEKEEEP
INFPSALKIYAFSKGDISNFPKPKMDHQMKVMDYYALDGASLLPVLALDLQPGDRVLDLC
AAPGGKTLIALQSLLPGLVVSNDMFESRINRLHRVLKQYIPPGFSDLDRISLVTTGDGCV
IREREAYDKVLVDAPCLTDRFSLKENDNSIFKSSRTKERLKLPELQSQLLVSALKAVRPG
GTVVYSTCSLSPLQNDGVVHLALSKIWKSTRIEYCVVDMSYAVRPLNFLYRFGSNLGLRY
GQIVLPSLLSNFGPMYCSKIKRLR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtcaacaaatcaagaaaacaaagcaggagtttaattctatatatgcaaaga
cgttttaagaaaaaggaaaaggttccccaaattacaaacattgctcgagcacaggagtac
tttgacagggcctatcctcccgtgtatgggccgcggtggccctcaattaggctcgctctg
ttgtcaaaacagaaatatgtagcggctgtaaacaactttgccaaccatgaaaatacaata
gaaaagtttcaggaacttggagctgtggatatcgggcataagtgcacaatgattgctgct
caaatgagagctaataaaaaagagtgggatcagcagatatctcaggaacatgacgaggac
acctttcaagatcaccccgagattgaagaatcaaaattaataagaccttctctaatagag
ctagatgatgatgagttggctgcacaagcaaaagctgaatctattaaacgctacccagaa
gagtatcgggctagggctttggcaaaagactataatcctggaacaatggaattagaccac
accagtcgaattattctcccttctgaagttgaatcccggggagtcaatgtcatgatggat
tatgtgccagcaaccaaactaaagggactggaaaactgggtagaagagacagatgtcttc
gttgatgccagccacggagaccaggagattggtttgaaaacagaaaaggaagaagagcca
ataaactttccatcagcactgaagatttatgcctttagtaaaggagacatatctaatttt
ccaaaaccaaagatggatcatcagatgaaggtgatggactactatgctctagatggagca
tccctgctaccagtactggctcttgacctacaacctggcgaccgcgtgcttgacctgtgt
gctgcaccgggaggaaaaacactaattgctctgcaaagcttactgccaggacttgtggtg
agcaatgacatgtttgaaagccgtattaatagactccatagggtgctgaagcagtatatt
cctcctggattttcagacttggacagaatttcattagttacaacgggtgatgggtgtgtt
attagagaaagggaggcctatgataaggtattggtggatgctccctgcctcacggaccgc
ttctctctcaaggagaatgacaacagcatctttaaatcctccagaacaaaggagagactc
aagttaccagaactacagagtcagctgcttgtgtcagctcttaaggcagtacgacctggt
ggaactgtcgtgtattcaacttgttcactgtcaccactgcagaatgatggtgtcgtacat
ttggcactatctaaaatatggaaaagtacaagaattgaatactgtgttgtagacatgagt
tacgcagttcgtccactgaacttcctatatcgatttggcagtaatttaggtctgcgttat
ggacagattgtcttaccatctctcctctcaaattttggtcctatgtattgttccaaaata
aaaagactacgataa
DBGET
integrated database retrieval system
