Procambarus clarkii (red swamp crayfish): 123775188
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Entry
123775188 CDS
T07930
Name
(RefSeq) serine-rich adhesin for platelets isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
123775188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123775188
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123775188
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
123775188
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123775188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
SAP
zf-met
Motif
Other DBs
NCBI-GeneID:
123775188
NCBI-ProteinID:
XP_045626100
LinkDB
All DBs
Position
92:complement(1572324..1627615)
Genome browser
AA seq
1758 aa
AA seq
DB search
MSGGKGTRLARKRKVDAELQSTSGSSLHDITDDFEDSAKVFRLPSQAHKKPKTEQACVPA
RSRGRPRKIGSRSAAHSDGPACKETERPEVLDVDSDAFVEHQESQLLDFQEEMTEDNNFI
LELEKSICSESEKLCPCCKHIVPCTVFSDHSKECLQRFKLNKRESERKSINIAGQKPQEK
TNGESASEINQQLLPCPVCLKSQKSKVQRQSHIKSCAQSHGLSMEQLLLASKLTEKQAEE
RIQLGLPLLVQQTSSSSDRYTEKRSKVSIVKRNNKESVKISRKDHDLAMALALSRSAAEE
EAEMRSSREEKLLAMGLEQIVDEDRKMQPLIFPFPETGNQRAIASQTRNRGRKRQGNFSK
TLLATRSVEERERLISEKVASILTSEDTPRVSWQNEGNSGAKGHLSKFRNEACKLWKTAH
KCADQPLEDFYVPELEPYIKPQSIAVGGLLRRLSQIPGRLNLTSLQSISDENSDSGSDCG
ETCVVDGYCTQLALAELLGSQDCLNLTRDSLFLKEDAVAPQTLESLPDPNVTLEPASGFW
VVRTTESLGSGETALKCNEDSSQISSENHEDNHYCNFAVGSITSGDGGKTTEKIVLDRNN
DNISETSDKSSESNDESSPVKAAQLRCLVTKNVTSVGRKTERKLRNSSERTTVYKEDTKC
DELNHLSTDGIDGGLVDNVSVDNNCREDHFESDAGHCEKTLQFKNNQHISTCNPDCEVIA
VLNNSSEHTVIAPVESHPATCSKLPSACSGSEVQYSCSLQQAVTNREETLVLSTLDENSK
FSESSGGSEATRIFLEDDYQNSFCNSSQKLLNVETFAVTDDSEGRETNKCYALRERINGD
GVKDVDSTREEIPDESEKSRCLQEKFIYDWSNFFSNEKKSDVTVTVLDGSVILAHSLVFF
VRCSLLYNEVIDGGMDILWDEATYEGATRFLVYIYTGTCNIERKSDPLWVEVYELALKYK
CEELVSYLKSLDITDITSVNAKSSIQTSRICERVSAASDSDSYILKPPIRSSLQETNEQS
GRRVRQNLNLYSFDTHTVLPKSPKSSISQADSDKLKEFSENSTSVSEGIQIMESQSPDIF
DEPVLAKDVSFISTPSNSPPASVSVDKSPLYDGTHAIHSEPVLISKKTCRNADSSQNFGS
TVHVTESNVTNLVGDQALVYTPIYEKVKTAYNVNPTEQKRASSVCGQASCPSSGKNNMDC
EGSSTLLKVSDENKLTDCPDAGDDLIDLTLTSCENSPASCTNNDMPSLPGDKNNALDLDL
LEEMEPLKLWGDSDSPETDEDACQEEPVRAFNHDGSGAGNLPENNRLGQEKEDVNETYIN
NVWEDFDDVENDMSVPVDVCQTPVKNTLRSDSSADPVHVVLPVSRPYPSKKRKRLSISTE
SDTETISQCEPMASGLLYKSSGKEATARKYSGRVHSVSITKNIDTVSDATTKSKEANAMA
LNLSISDETMLKISDLDCEEVESVKGCKRLSAKLNESENFHVPLADLMTPQPKQTSKKQI
VTPFPDYKNMSSPDLKKELAKYGLRALARRKAVVLLDHVYEQTHPLVTDSEAESSFCETP
KGKTFAIDNSNIKATTTEHENVKKNKHLANAAKGKEVTKKIPAKRKKEKVLSASDVEVSD
EEESSQCNSSQMSGTSCSTDDSKYDCIEESELFGISDDDITPTQQADIGSKVVQFISSDH
ELHSKVLLYEPIFVEELQASLKANGIKCSVKNLLDVLDDQCITFRTQNQRNQRRKQKKQG
EKQRRSNKRRKRHSSASH
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggtaagggtactcgccttgctcgcaagagaaaagttgatgctgagctgcag
tctacctctggctcttcgttacatgatatcactgatgattttgaagatagtgccaaagtc
ttcaggctaccttcccaagcgcacaaaaaacccaagacagaacaagcctgtgttcctgcc
aggtctcgtggtaggcccaggaaaattggtagtaggagtgcagcacatagcgatggacct
gcatgtaaagaaacagaaaggccagaagtactcgatgtagatagtgatgcatttgtggaa
catcaagagagtcaacttttagacttccaagaagaaatgactgaagataataattttatc
ttggaattagaaaaatctatatgttctgaatcagaaaaattgtgcccttgttgcaagcac
attgttccatgtactgtattctccgatcactctaaagaatgtttacagagattcaagcta
aataaaagagaaagtgagagaaaatctataaatatagctggacaaaaaccccaagagaag
acaaatggagaatcagcgagtgaaatcaaccaacaactgcttccttgccctgtgtgcctc
aagtctcaaaaatccaaggttcagcgtcagtctcacattaaaagctgtgcccaaagtcat
ggtttatccatggaacagctattgctggcatcaaaactgactgagaaacaggctgaagag
aggatccagttaggacttcctctcctggtgcagcaaacaagtagcagtagtgatagatat
acagagaagagaagcaaggtaagcattgtaaaaagaaataataaagaatcggtgaaaata
agccgtaaagaccatgatttggcaatggctttggctctttcacgttcagctgctgaagaa
gaagctgaaatgagatcttccagggaagagaaattgctagcaatgggtttggagcagatt
gtggatgaagacagaaagatgcagcccctaatatttccttttccagaaacaggtaaccaa
agagccatcgcatctcagacaagaaacagaggacgaaagcgtcaaggaaattttagcaaa
acacttctagctacccgttctgttgaggaaagggaaagacttattagtgaaaaagttgca
tctattttaacttctgaggatacgccaagagtcagctggcaaaacgaaggaaattctggt
gcaaaaggccatctttcaaagtttaggaatgaggcttgcaagttatggaaaactgctcat
aaatgtgcagaccaacctcttgaagacttctatgttcctgagcttgagccatatattaaa
ccacaaagcattgctgtcggaggacttttaagaagactatcacagatccctggacgctta
aacctgacttctctacaatccataagtgatgagaattctgactcaggatctgactgtgga
gaaacatgtgtagttgatggctactgcacacagttggcccttgctgagctcttgggttct
caagattgtcttaacctcacccgagattctctcttcttaaaagaagacgcagttgctcct
caaactctggagtcattgccagatccaaatgtaaccttagaacctgccagtggcttttgg
gttgttcgtacaacagaaagtttaggaagtggcgaaactgcactaaagtgtaatgaagat
tcaagtcagatttctagtgagaatcatgaagataaccattactgtaattttgctgtagga
agtattactagtggagatggtggcaagactactgaaaaaatagtattagatcgaaataac
gacaatataagtgagacaagtgataaaagtagtgagagtaatgatgagtcttcacctgtt
aaggctgctcagctgcgatgcttagtgacaaaaaatgttacaagtgttggtaggaaaact
gagagaaagttgaggaattcttcagaaagaaccacagtgtataaggaagatacgaagtgt
gatgaacttaaccacttgagtactgatggtatcgatggaggtttagttgataatgtatct
gtagacaataactgtcgggaagatcattttgaaagtgatgctggacattgtgagaaaact
ctacagtttaaaaataatcagcatatcagcacttgtaatcctgattgtgaagtgatagct
gttttaaataatagttctgaacacacagtaattgctccagtagagagccatcctgctacc
tgttcaaaattaccatctgcatgtagtggaagtgaagttcaatattcctgtagcttgcag
caggcagtaaccaacagagaagaaaccttggttcttagcactcttgatgaaaacagtaag
ttttctgaaagttcaggtggttcagaagcaactcgcatatttttggaggatgattatcaa
aattctttctgtaatagttcacaaaaactactcaatgttgaaacttttgccgtcactgat
gactcggagggaagagagactaacaaatgttacgcactaagagaaaggattaatggtgat
ggtgtgaaagatgtagactcaacacgggaggaaatcccagatgaaagtgaaaagtctcgg
tgtttgcaagagaagttcatttatgattggagcaactttttctctaatgaaaagaaaagt
gatgtcacagtgacagtattagatggtagtgttatcttagctcactctctggtgtttttt
gtaagatgctcactgctctataatgaagtgatagatggagggatggacatactctgggat
gaggctacatatgaaggagcaacgagatttttagtatacatatataccggtacctgtaat
atagagagaaaaagtgatccactatgggtggaggtctatgaattggctcttaagtacaag
tgtgaggagttggtatcatatctaaaatctcttgacataactgacattacttcagtcaat
gctaaatcatcaatacaaacatccagaatctgtgagagagtgagtgctgcatcagattca
gattcttacattctcaaacctccaataagatcatccttgcaagaaactaatgaacaaagt
ggtagaagagttaggcaaaatcttaatttgtattcttttgacacacacactgttttacct
aaaagtcctaaaagcagtatatcacaagcagacagtgataaactgaaagagttctcagaa
aatagtacttcggtatcagaaggcatccagatcatggagtctcagtcgcccgacatattt
gatgaaccagttctggctaaagatgttagtttcatctctactccatctaattcccctcca
gcatcagtcagtgttgacaaatcaccattgtatgatggtactcatgcaattcattcagaa
cctgttttgatatccaagaaaacttgcaggaatgctgactcgagtcagaattttggatcg
acggtgcatgttactgaaagtaatgtgacaaatttagtgggggaccaggctctcgtttat
acaccgatttatgaaaaggtaaagactgcatataatgtaaaccccactgaacaaaaacga
gccagtagtgtttgtggtcaagctagttgcccgtcaagtgggaagaataatatggattgt
gaaggatcttcaacgctgttgaaagtaagtgatgaaaacaaacttaccgactgtccagat
gcaggagacgatttgattgatctaactctcaccagctgtgagaactctcctgcaagttgc
actaacaatgatatgccaagtttacctggtgataaaaataatgctttggatttggatctt
ttagaagaaatggaacccttgaagctgtggggtgattcagatagtcctgaaacagatgaa
gatgcatgccaagaagaaccagttagggcatttaatcatgatggctcaggagctggaaac
ctacctgaaaataatagactaggacaggaaaaagaggatgtaaatgagacatatatcaat
aatgtttgggaggattttgatgatgtagagaatgatatgtcagttccagtagatgtgtgt
caaacacctgtgaaaaacacacttagatctgattctagtgctgatccagttcatgttgtt
ttaccagtatcaagaccttatcctagtaaaaagaggaaaagactttccatcagtacagaa
tctgacaccgagaccatttctcagtgtgagccaatggcttctggattattatataaatct
tctggtaaagaagccacggcaagaaaatattcagggcgggttcactctgtatccatcact
aaaaatatagatacagtatcagacgccactacaaaatctaaggaagccaatgcaatggca
ttaaatttgtctattagtgatgaaactatgcttaaaatatcagatcttgattgtgaagaa
gttgaaagtgtcaaaggttgcaaacgcttgtctgcaaaattaaatgaatctgaaaatttt
catgttcctcttgctgatctaatgactcctcaaccaaaacaaacttcaaaaaaacaaatt
gtgacaccctttcctgattataagaatatgtcatcaccagatcttaagaaagaattggca
aagtatgggttgcgagctttggctcgccgaaaggctgtagtactcctggatcatgtatat
gagcagacacatccccttgtcaccgacagtgaggctgagagcagtttttgtgaaactcct
aaagggaaaacgtttgcaattgataactcaaatataaaggctaccaccacagaacatgaa
aatgtgaaaaagaataaacacttggcaaatgcagcaaaaggcaaagaagttaccaagaag
atacctgccaaaagaaagaaagagaaagtgctcagtgcaagtgatgtagaagtgagtgat
gaggaagagagtagccagtgtaattcatctcaaatgtcaggcacaagctgcagcactgat
gattctaagtacgattgcatagaggagtcagagctgtttgggattagcgacgatgacatt
actccaactcagcaagctgatattggtagtaaagtagtgcagttcatcagcagtgatcat
gaactacacagcaaagtcttgttgtatgaacccatctttgttgaggaattacaagcatcc
ttaaaggccaatggtattaaatgcagcgtgaagaatctgctggatgtgctagatgaccag
tgtataacattccgtacacaaaaccagagaaaccaaaggcgaaagcagaaaaagcaaggg
gaaaagcaaagaagatctaacaaaaggagaaaaaggcactcaagtgcatcacactga
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integrated database retrieval system
