KEGG   Procambarus clarkii (red swamp crayfish): 123775366
Entry
123775366         CDS       T07930                                 
Name
(RefSeq) LOW QUALITY PROTEIN: intermembrane lipid transfer protein Vps13
  KO
K19525  vacuolar protein sorting-associated protein 13A/C
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcla04131]
    123775366
Membrane trafficking [BR:pcla04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    123775366
SSDB
Motif
Pfam: VPS13_N VPS13_M VPS13_VAB VPS13_C WWE
Other DBs
NCBI-GeneID: 123775366
NCBI-ProteinID: XP_045626468
LinkDB
Position
70:complement(27582218..27697718)
AA seq 3323 aa
MFESLVSELLNRVLGTYIENLDGSKLKLSIWGGDVELRELEVKQSALDELNLPVRPVFGH
IGCLTLKIPWSQLYTAPWVAVVERVLVIVVPNTSIKYNAEREEKLLQEIKMATLQKAESA
KLKLQEMEKGSKSKSQDSFQEKMIAQVIRNIQVSIRDIHIRYEDSVSCQGAPFAAGVTLH
DLSMKSTDSDWKPCLDTDKLIYKLNCLDSLAIYWNPSAELLSEVNQSKEMTVQCLTKLIA
AQENLPQGMKYIIGPICSTAKLQMDSKPEDDDPSFSIPVINLDFVMDELAIGLSRHQYSN
AMALLESFDRLKISSKFRKYRPAFSRIKGNARAWWHYAYACQLENIQRVHQNWSWKHIKE
HRATCQRYKAAYKAKLKNKRLSPQQIQDIKDSERVLDVFNITLSRRQTEMEVEREGELQK
RENVKKGWFSGWFFGSTQTTNEDVAKDEGNLVKKLEAEMNDQEKKKLYEAIGYSETGPPP
EFPPEFVNLRLQFLLKQLVLTIVDENAAGAIVTQAKLNQVASVVLNRSGADALSVKASVQ
SFIVEGFGVDGLPPRLVTSENATSDTPLLDVMYETNPLDKLCNQRVKVSSEPLQVVYDAA
TINQLADVFAPPKNVSLQQLQASALNQLEVVKERSVTGLQAAIDNHSVLDLNVAFAASHI
IIPEGGSYFEGCSALVVTLGSLLMKSVAQAKDSLALTDLVSLGHSQEEVMQAVRSSSYDH
FTIELVDIQVIVCLSNEDWSSTLQCHEATPLHLLQPTNLRVDLFKCLLTNEPNLAKVKIT
VSLPNVVLSVIDERLLQLAYIAHSIPVVQKEVAAEETTHFGQETDVNMNMITEDVALARL
ERAELNLSGEQQDTPQFTNLALTFTIKEISIELKKASGKIHQPLMKVAALSASVELVQRT
FDLTAAIILGGVLVQHMEGGERRLLSTPLVEGSSQALLTIKFMQVNPKSPDFESKHASTA
QHLCVEVSNMKAQLEQSAILSILAFVEQLNYKLSQLSPSAKTPTEELQTPSAETPTEEIH
TQSSLHKSLDGQDEKQNGKIMDKFDAKTSAMHKKNMSEVITLKIVAKLGQVSVIIGLRTR
EVAQVDVAGLVVNVVMKGKNIIITSQLKNFTVIDPWSAALHPKIVEVIGMDAWDAQVSVY
GQATEGEQYLNMTCVDTSISLTFGCARIVFLSKFVTDVLNWVNKFQSAKAAVASASVAAA
AAAQATLHEAYKQCSRISLSLTLRAPLILIPQDSSSLSGLMADLGQITINNKFEMGQERN
ELGYPAIYDMINLELHNVKLSRVQLTADGSMEQEYELLQPISLKITICRNLTISWHKQRP
EVEVQAKVAPIKISLSEEDLLVTLTVLQDNLGEQATATSVEDLTTSETSGKLMREKDVES
VLAEHGHIFTKIKFSFTVEAVTLELLTGCSSDPETVYASSDSSNGKSVSKSSEPAIGESC
AQHPDSVAASSLANVTQQETKKPYASTSQDFSTSSNDGLNTRRPSSKLGCKIMAARRALA
EVSLQVVRIKGNMMSDGSLAANLVLFDCILQDTRPDQEGFITRMMERKERSGERGMMDLT
YRQEISKDIYVDLRISGFVLVLHLPYLLRLQHFFTDNLPQQAPVPSQPTKPKDIIKPKSD
SSVDGDGRPRGIMTIRVKVEQPDITVVEDVSSLDTSCIILHAEVNSDIKQTPVSQNISAS
IANLQMYTCCYNPQKRQKTLSQILSRCELSLLCSVTPSHAEHIDLKMSQVDLRVSPGTIE
LLSSIGTALSSLETTTEEVTEEEQNWCGIWETKPLNPTEFSFLEVENAVEAICREEKELA
SPICAGSGGEIAMIMMECLLVTLEAGSLTSPIPLIKLQASVSASATGFRSQKMHLNGELS
SELAYYNPRLAVWEPLLEPVEGAEKLGAPEHIPWTLQFELIKDMCVNTSRAPSIASPVAY
PDVEEAEEFEEIPNEEPVCSISVTVKDPLELTVTKTFMEVLKSLSEAFSEAYKRTVTGTK
SPCAPYRIINRTGVHIIAAIMQSGFQVAAAGGDEVEQVTVESGAEVDLFDVKPLTPKHKR
VASLVAECQTIQDRNILIKIPSLNCKCLIPVARADKRYFEVDHESGDKLGLVANISVENG
CKIITLSSCVQVTNYLDVTVDVYYMTDRGNEVEFVLSLEQDECAMLPLHAVHTPTAELFF
SVKGHSVCIVPFVWRGLQNVPGHVQELQCLPRDVHEVHATPFLISATGDVEQILWNNTGR
RTMKSALYKVQLRPCLVLHNLLPVPISLEPPGTISSRVLMPGSCLQLTKARLGSMYLELQ
LLDYQSRDWVCGKAVESNPPELSVWTFESRGDIMGGPLHLDLGMLVAKSKASLSLSLYCP
FWMVNKTGLMLTYRKSRKIERTSSTSSTDSTSSPLKGDTPHNIVVHEEDSKEAMLFSFKS
KVFFGKKKATVKVMDSEWSEKFSLDVVGSSGSITCKAPNKNYQLGVDIKLGRSGLTKIVM
FSPFYKILNKAPFDLEVVEVGVAQAEWFTVLAGECIGWWPIGNGREISVRVRGTMDATCA
LQYDCPHSKLLALPNKCGGVVGEVSVTEGGVLVKLDKFFQGAATALIINQLTNTTISFWQ
DGFEASKMLLQPQTIQLFTWSDSRGALKVFWACGSGKPVEHTLDQDNRGQMMNDTINWVV
FLNNSQRCLLFTDDSSIAKNALTAVELERFELDIGLSFSSIGLSLVDDIKRKEVVYASLA
SSGVVWEHRKVKGKKHRAFTHAQTEVIEKAYQLFQNQIKAISDVSAVQSCFDLNKTLEVD
FATMTCNKPFKRKIRRTFQPGIWFQMKTSSHQKQIHLKINSVQIDNQMTDVMFPVVLARV
PTSRSVMAETVAKPFCEVSIVQRMTSPLFTQFKYLAVLIQEFHVKVELPFVFAVLEVLFP
AADESPDLYSPEKYEYDAGIVHEALTTTVKNQSSGGQRDFFDHLHLSPIKMHLSFSLTGL
ESGASMPVGGQVIHLFLQSVGVTLTEVQDVVFRLAYMERLNHWMSWNQLVQEMIIHYRGQ
VIKQLYVLVLGLDVIGNPFGLVVGLTKGVEDLFYEPIQGAIEGPGEFAEGVLLGVTSFMG
KTVGGAAGAVSRITGTIGKGVAALTLDEDYQKRRREAMHRKPADGIESLARGGKGIVTGV
VDGVTGVFLKPIDGAKEEGVEGFFKGVGKGVVGLVTRPASGVIDFASGSFDAVMRATDAT
EEIERYRPTRLIDSDGVVRPYVKRFAQGARMLLELEKGRYAKTDLYIAHAYITASKSLLI
ATNQRIMQVSRNDIMGHLKVDWVHTYDELSEPPVLTPKGLRLSVKQEKRRVLGMFGGGDN
SKLVHINCLEQAEWFLSALKKVY
NT seq 9972 nt   +upstreamnt  +downstreamnt
atgttcgagtctctcgtgtcggagctcctcaaccgggtccttggcacctacatcgagaac
ctcgatggctctaagctcaagttgagtatctggggaggggacgtggagttgcgggagctg
gaggtgaagcagagtgccctcgatgaactaaatcttcctgtgcgaccagtcttcggccac
attgggtgtttaactttaaagataccctggtcccagctgtacactgcaccatgggtggca
gtagtggagagggtgttagttattgtggtgcccaacacgtccatcaaatataatgctgaa
cgtgaagaaaagctactgcaggagattaagatggccacccttcaaaaggcagaaagtgca
aagctaaaacttcaagagatggagaaaggcagtaaatccaaatctcaagacagctttcag
gagaagatgattgcccaagttattcgcaacattcaggtctccatacgagacatccacatc
agatatgaagactctgttagctgtcaaggtgctccatttgctgctggtgtaacgctacat
gacctctcgatgaagagcacagattcagattggaagccatgcttagacacagataaatta
atttataagctgaattgtctggatagtttggccatttactggaaccctagtgctgagctg
ctgtcagaggtaaaccagtcaaaagagatgacagtccagtgccttaccaagctcatagct
gcacaagaaaatctacctcagggaatgaaatacattattggaccaatttgctcaacagca
aaactacaaatggactcaaaaccagaggacgatgacccaagcttttctattcctgtgatt
aatcttgattttgtcatggatgagctggcaataggactgagtcgccaccaatactcaaat
gcaatggcgcttcttgagtcatttgatagattgaagatatcctcaaagttccgcaagtac
cggccagctttcagtagaatcaagggcaatgctcgcgcttggtggcattatgcatatgct
tgccagctggagaacatccagcgcgtgcaccagaactggtcgtggaagcacataaaggaa
catagagctacttgccaaaggtataaggcagcatataaggcaaagctcaagaacaaaaga
ctctctccacagcaaattcaagacattaaagatagtgaacgcgtacttgatgtttttaac
attactcttagcagacgacaaactgaaatggaggtggagcgcgagggagagttgcagaaa
cgggaaaatgtaaaaaaaggctggttcagtgggtggttttttggaagtacacaaacgaca
aatgaagatgttgctaaggatgaaggcaatttggtaaaaaaattagaggctgaaatgaat
gatcaagagaagaaaaagttgtatgaagcaataggttactctgagactggtccacctcct
gagtttcctccggagtttgtgaatttgcgtctacagttcctgttgaaacagctggtactg
accattgttgacgagaatgctgctggagctattgtcactcaagcaaaactcaaccaagtt
gcatctgttgtcctgaatagatcaggggctgatgctttgagcgttaaagcaagtgtacaa
agcttcattgttgagggctttggagttgatggcttacctcccagattagtgacctcagag
aatgccacttctgacactcctcttctagatgtaatgtatgagacaaatccactagacaag
ttgtgcaaccagcgtgttaaagtatcatcggagccattgcaagttgtgtatgatgctgcc
accatcaaccaacttgctgatgtttttgccccacctaaaaatgtgtcccttcagcaacta
caggcttcagcactgaaccagttggaggttgtaaaggaaaggagtgtgacggggctgcag
gctgccatagataaccacagtgtccttgacctaaatgttgcctttgctgcctcgcacatc
attattccagaaggaggctcctatttcgaaggttgttcagcccttgttgtaactttgggt
agcctgctgatgaagagtgttgcccaggccaaagacagcctggcattgactgatttggtg
tccctcggacacagccaggaagaagtcatgcaggcagtcaggtcttcttcctacgaccat
tttactattgaacttgtagatatccaggtgattgtgtgcttgagcaatgaggattggagt
tcaactctgcagtgtcatgaagccacaccgctccacctcctgcaacccacaaaccttcgt
gttgacctgttcaaatgcctcttgactaatgagcccaaccttgccaaagtgaagataact
gtgtccttaccaaatgtggtgctgtctgttattgatgaaagattgctacaattggcctac
attgcccatagtattcctgttgtccagaaggaggtggcagctgaagagaccacacacttt
ggtcaggaaaccgacgtgaatatgaacatgatcactgaggatgttgcactggctcggctg
gagcgtgctgaactcaacctaagtggtgaacagcaagatacccctcagtttaccaacctg
gctctcacctttactatcaaagaaataagcatagaattgaaaaaggcttctggtaaaatt
caccaaccattaatgaaagttgctgctctctcggctagtgtggaacttgtacaacgtaca
tttgacttaactgctgctattatccttggaggagttttggttcagcacatggagggtggt
gaacgccgactgctgagtacaccacttgttgaaggcagttcccaagcgcttctcacaatc
aaattcatgcaggtaaatcccaaaagcccagactttgagagcaagcatgcttcaacagcc
cagcatctgtgtgttgaggtgagtaacatgaaagcccagctggagcagtcagcaatactt
agcatattggcatttgtagagcaactcaactacaagttgtctcagctcagcccatctgct
aagacaccaacagaggagttacagacaccatctgctgagacaccaacagaggagatacac
acacaatcatctcttcacaagtctcttgatggtcaagatgagaagcaaaatggaaaaata
atggacaagtttgatgctaaaacttcagccatgcacaagaaaaacatgtcagaagtgatc
acactgaagatcgtggccaaattaggacaagtgagcgtgataattggcctacggacacga
gaagttgctcaggtggacgtggcaggattggtagtaaatgttgtgatgaaaggcaaaaat
attatcatcacttctcaactcaaaaacttcaccgtcattgacccatggtctgcagccctc
catcccaagattgtggaggtcattgggatggatgcttgggatgcccaagtgtcagtttat
ggccaagcaacagagggtgagcagtatctcaatatgacgtgtgtggacaccagcatttct
ctcacatttggctgtgctcgcatcgtatttttgagcaagtttgtcacagatgtattgaat
tgggttaacaagttccagtctgcaaaggcagctgtagcatcagcaagtgtagctgctgca
gcggctgctcaggccactttacatgaagcatacaagcagtgttcacgcatcagcctctcc
ctcaccctcagggccccattgatccttattcctcaagactcgagcagtctgtcaggacta
atggctgacttgggacaaatcactatcaacaacaaatttgagatgggtcaggaaaggaat
gaattgggctatccagctatttatgatatgatcaatttggaacttcacaatgtcaaatta
tccagagtgcaacttacagctgatggatcaatggaacaagagtatgagctgctgcaaccc
atctcgctcaagatcaccatctgccggaatctcaccatctcttggcacaagcaacgccca
gaagtagaggttcaagctaaggttgcacccattaagataagtttgagtgaagaggatctg
ctagtgactttgacagtactgcaagacaaccttggggagcaggctactgctacttcggtt
gaagacttgactacatctgaaacctctgggaagttgatgagggaaaaggatgtagagagt
gtacttgctgaacatggccatatttttaccaagatcaagttttccttcactgttgaagct
gtgacattggaattactcacaggatgcagtagtgatcctgagacagtctatgcatctagt
gattcaagcaatggaaaatctgtgtcaaaatcaagtgagccggccattggcgagtcttgt
gcacaacatcctgacagtgttgctgcatcaagtcttgcaaatgttactcaacaagaaacc
aaaaaaccatatgcatcaacctcgcaggatttttctacatcgtcgaatgatggattaaac
acacggagaccgtcgtcaaagttgggatgcaaaataatggcagcaagaagagccctggca
gaggtcagtttgcaggtggttaggatcaaagggaatatgatgtctgatgggtcgctggct
gccaatcttgtcctctttgactgtatcttgcaagatacaagaccagatcaagaggggttc
atcactcggatgatggagaggaaggaacggagtggtgagcgtggaatgatggacctaacg
tatcgtcaagaaatctccaaagatatatacgtggatctgcgcatctctgggtttgtactt
gtgctgcatctgccatacttgttgagactccagcatttcttcactgataacctacctcag
caggctccagtgccttcccagccaaccaaacctaaagacattatcaaaccaaagagtgac
tcgagtgttgacggcgatggacggcctcgtggtataatgactatacgtgtgaaggttgag
cagccagatatcacagtggttgaggatgtgtcgtcccttgacacctcttgtattatcctt
catgctgaagtaaacagtgacattaagcaaacaccagtgtctcagaatatcagtgccagt
attgctaaccttcagatgtacacgtgctgctataatccccaaaagaggcagaagacgctt
tcacagatcctgagtcgatgtgaattgtcacttttgtgtagtgtaacccccagccatgca
gagcacattgatctcaagatgagccaagttgatctacgagtgtctcctggaaccatagaa
ttattaagtagcattggtacagcactatcaagcttagaaacaactacagaggaggtaaca
gaggaagaacagaattggtgtgggatatgggagaccaaacccctcaatcctaccgagttt
tctttcttggaagtagagaatgcagtagaggctatttgcagagaggaaaaagaattagcc
tctccaatatgtgctggctctggtggggagattgctatgattatgatggaatgtttgctt
gtgacactggaggctggatctcttacctcacccattccactcatcaaacttcaggccagt
gtctctgcaagtgccacaggctttcgttctcagaagatgcatttgaatggagaattaagc
tcagaactcgcctattacaatccgcggttggcagtgtgggaaccattgctggagccagtg
gaaggtgctgaaaaactaggtgctcctgaacacataccttggacattacaatttgagctg
attaaagatatgtgtgtgaatacatcccgggcaccatccattgcaagtccagttgcatat
ccagatgtagaggaagctgaagaatttgaagaaataccaaatgaggaacctgtttgttct
atatctgtgacagttaaggatccactagagctgacagtgaccaaaactttcatggaagtc
ttaaaatctctctctgaagctttctccgaagcatacaaaagaactgtgactggaaccaag
agcccctgtgcaccatatcgcatcattaaccgcaccggggtgcacatcattgcagccatc
atgcaatcaggttttcaggttgcagcagcaggtggagatgaagtagagcaagtaacagtt
gaatctggggctgaagtggatctttttgatgtaaagcctttgacacctaaacacaagaga
gtggcatcacttgtggcagagtgccagacaattcaggatcgaaacattctcattaagatt
ccaagtttaaactgcaagtgtttgattcctgttgcccgagctgataaacgctattttgaa
gttgatcacgagagtggggataagttgggtctggtcgccaacatatctgtagagaatggt
tgcaagatcatcacgctcagttcttgtgtgcaggtgaccaactacttggatgtgacagtc
gatgtctactacatgacggacagaggaaatgaagtggagtttgtgttatcactggaacag
gacgagtgtgccatgctcccacttcatgctgtacacactcccactgctgaactcttcttt
tctgttaaagggcattcggtgtgtattgtaccatttgtttggcgtggacttcaaaatgtg
cctgggcatgtccaggaactccaatgtctacccagagatgtccatgaagtgcatgctaca
ccattcctgatatcagccactggagatgtagagcaaattttatggaataacacaggtcga
cgcaccatgaagagtgcactctacaaggttcagctgcggccatgcttggtactgcacaat
cttctcccagtacccatctcgctggaacctcctggcaccatctcctctcgagtccttatg
cctggctcatgtttacagctgacaaaggctcggctaggctccatgtacttggaactgcag
ttacttgattaccagtccagggactgggtgtgtggtaaagctgttgaatccaaccctccg
gagttaagtgtgtggacatttgagtcaaggggcgatatcatgggtgggcctcttcacttg
gaccttggtatgcttgttgccaagtccaaggcaagtctctccctcagcctctactgccct
ttctggatggttaacaagactggacttatgttaacatataggaagtctcgtaaaatagag
cgaacatcatccacctcttctacggactctaccagtagtccactcaagggtgacacccca
cacaacattgtggttcatgaggaggatagcaaggaggctatgctcttctccttcaaatca
aaggtattttttggcaagaaaaaggccacagtgaaagtgatggatagtgaatggtctgaa
aagttctccttggatgttgtggggagttcaggatccattacatgcaaagcaccaaacaag
aattatcagcttggtgtggacatcaaacttggaagatctggtctgacaaaaattgtaatg
ttctcacctttctacaaaattcttaataaagctccatttgatcttgaagttgttgaagtt
ggagttgcacaagccgagtggttcacagtccttgcaggcgagtgcattggatggtggcca
atagggaatggacgagagataagtgtacgtgtgcggggcaccatggatgccacatgtgca
ctccaatatgactgcccacactcaaaactgctggcactacccaacaagtgtggaggagtt
gtgggagaagtgagtgttactgaaggtggggtgttagtcaagctggacaagttcttccag
ggggctgccacagctctcatcatcaaccagttaacaaacacaactatctcattttggcaa
gatggatttgaagccagcaagatgttgctacaaccccagaccattcagctatttacttgg
agtgattcaagaggggcacttaaggtgttttgggcttgtggatcaggaaaaccagttgag
cacactctggatcaggacaaccgaggccagatgatgaatgacacaatcaattgggtggtg
ttcctcaacaatagtcagcgctgtctcctttttactgatgactcaagtattgctaaaaat
gcacttactgctgtggagttggaacgttttgagctggatattggactctccttcagcagt
attgggctgtccttggtggatgacataaagaggaaggaggtggtgtatgccagccttgcc
agctccggagttgtgtgggagcaccgtaaagttaaaggcaaaaaacatcgagctttcaca
catgctcagacagaagttatagagaaggcttaccaattatttcagaatcagattaaagca
atatctgatgtgtctgctgtccagagctgctttgatttgaataaaaccttggaggttgac
tttgctaccatgacttgcaacaagcctttcaagcgaaaaattcgtcgaacattccagcca
ggcatttggttccagatgaaaacatcttctcatcagaagcagattcacctcaaaattaac
agtgtgcaaattgacaaccagatgactgatgtgatgtttccagttgtcctggctcgagtt
ccgacctcccgaagtgttatggccgagactgttgccaaaccattctgtgaagtaagcatc
gttcagagaatgacatctccactgtttacacagttcaagtacctggcagttctcatacaa
gaattccacgtgaaagtcgagttgccgtttgtatttgctgtcttagaagtgttgttcccc
gcagctgatgagtctcctgatctttactcaccggagaaatatgaatatgatgctggtatc
gtccatgaagctttaacaacaacagtgaagaatcagtcctctggagggcagagagatttc
tttgatcaccttcatctctcaccaattaagatgcacctgagtttctcactgactgggctg
gaatctggtgcgagcatgccggtgggcggacaggtgattcacctcttcttgcagagtgtt
ggggtcaccctcactgaggttcaggatgttgtcttcagactggcatacatggagcgtctc
aaccactggatgagttggaatcagctggtacaagaaatgataattcactaccgtggacaa
gtgatcaaacagctttatgttcttgtgcttggtcttgatgtgattggcaacccctttggt
ctggtggtgggattgacaaaaggagttgaagatttattttatgaaccaatacagggagca
attgaaggtcctggagagtttgctgagggagtgttgcttggtgtgaccagctttatgggt
aaaactgttggtggtgcagctggtgctgtctcccgtatcacaggaaccattgggaaaggc
gtagcagccctgactcttgatgaagattaccagaaaagacgacgggaagcaatgcatcgc
aagccagctgatggtatagagagtctggctagaggaggaaaaggcattgttacaggagtt
gttgatggtgtgacaggagttttcttaaaaccaattgatggagccaaggaagaaggtgtg
gaggggttcttcaagggggtaggcaaaggagttgtgggcctggttactcgtccagcctcc
ggagtcatagattttgccagtggatcttttgatgcagttatgagagccacagatgccact
gaagagatagagcgttatcgtccaactagattgatcgactctgatggggttgtccgacca
tatgtaaaacggtttgcccagggagctagaatgctactggagttagagaaaggacggtat
gcaaaaacagatttatatattgctcatgcttacattactgccagcaagtctctactgatt
gctacaaaccagcgaattatgcaagtttcccgcaatgatattatggggcaccttaaggtt
gattgggtgcacacgtatgatgagctgtcagaacctcccgttctcactcccaaaggctta
cgtctttcagtaaaacaggaaaagaggagagttctaggaatgtttggtggtggtgataac
tcaaaattagtacatataaattgcctagaacaagcagagtggttcctgtccgcactgaag
aaagtctactag

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