Procambarus clarkii (red swamp crayfish): 138349781
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Entry
138349781 CDS
T07930
Name
(RefSeq) breast cancer type 2 susceptibility protein-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03440
Homologous recombination
pcla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138349781
03460 Fanconi anemia pathway
138349781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
138349781
03036 Chromosome and associated proteins [BR:
pcla03036
]
138349781
03400 DNA repair and recombination proteins [BR:
pcla03400
]
138349781
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138349781
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
138349781
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
138349781
FA (Fanconi anemia) pathway
Downstream FA components
138349781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_OB3
BRCA2
BRCA-2_helical
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
138349781
NCBI-ProteinID:
XP_069162627
LinkDB
All DBs
Position
58:9458785..9533160
Genome browser
AA seq
2836 aa
AA seq
DB search
MGTWLLTDWLVVFQGNSVLRMELAMGSEVSVGVYRWYQQVKKKDLGETRRDWLQYLRDQA
RLRRHNDNTVRCMQDDAAERNGKIEEEKEEEEEKRRKDADESTLNVGIATHSGRESPILQ
RVLSTPQNSHKRRNVQGNNQNELEAENMTTKSKKARYSSPTTPKQEMRSPFSMFQEPGFI
TPTLVLRKGDIGTPDLSLFSPTVPISDIFSPRTSTGNCTGDIVTSLGGNLDESLVTWTSA
LATPTSHPQAGEQDGRTSPSTLERLTLHPKQGLRQNVMARSLFSPHTRSVESPSRREKCS
PGLGVIKGLSPLPVFINKLTTEVVEKTNIDNESKEKFLINDTQTFRISLGKRCMESMEED
SHEKVQLSKGRRRRSIVTTDTENGFPLESTPDTRHTWTIKGPERTSTPVRVTPQSRTSLF
PRHLVLADDVPEPQECSEMIQVTQIDHKADNAKETEKMQTPETNIIVREHLNTNHIRVSL
QSDVTENSDELSVNPLDLICSPVKVVSKKCVEGMNSEAKLKNTCQDVTAGSDVKIMSSGT
NMRKPDAEEQPVIIGNIPQNIDTCTGPDLNITYNSDVNHHLEMYNPNSKLLLPSEAEIIH
EKAEEKFKDNELKESFMTRNQSTDNSPLILEAKTPEQSGQCISEAASHGSLSVPLFKKTS
CKYLDSNEESPGRDASDGAKTPISTSSDSLQGKSILNKLSLRKKKNLSGKFLYPSKSEEG
YEKLKMTYTETIGLVESSSSSFPEPQPPISKIQSACSTSSVLKVSPDIHSIANKQQNFLS
LTSLEKDTRFESNDVSLSDKTTYSPLGFDKEKSSSPRNQLVPADGKRLGSQWSSSRRVCV
ASPVTSVGAVGTAFDDPHDTFTDADILTISTQGNSQKPLNSEQVYFNTALPKSKYCNDKV
SRRLSGGLSRKLQQNGDQSKMVASEFQVVPERDLTEEENTLAVSSYSHGPEHDQLASPHI
LQQERFSQIMNDSLNDVYLSEMDTNPCVPVVDEVVVKSRTGEVQQASVLDLGGTGAPSNT
LAAETDDKYQNDSRENIGSGFYTSRGKQMIVSKEALEHAKKLVKELPSDGSLMVEDTSSD
KKYTACVAPRGVIANDKTCQFSAPVSISGHFPTVCSFTTARGSRVTVNPAAVAKAKKLWE
EENCVTECDPENSDTDVQDHSNILHKVLQEKKVAIAHDDRDSLNIHALKTDTCVTVQADS
ESLLNKSCQMLLKRTKDCVDGRRCDGRSNDMQDSSSKLVNKYQCVGAPDEASSSVRGFQG
FSTASGSKINISKEALKKAKLLWEENTGESDPDEHKTVNIQKSARSGRRVPDASHTLQSE
RQGSRCSPADYNVSEGTVLSADSSNSPKLKTSQSAVSKSSHSGVCEAQSLLNESENLKSH
LRSEPITVNIIDKCNERSMKTLPIKNNSPVPQSKHNMAACISNENTNVSHTSSIGNIYHQ
SKGESFSGFHTARGKRVSLTEAAIARAKTLWEESDCNVMVTNNSTSLQDDGNKLILSSRI
PLLEKQGNILSENLAPSLEEQSNITQQNALEKPQPLQFCKSEQSLFDVRLPLNTSYKDYQ
RAGTSNLLSKLVIKQEETKQYHLDEEKQSYLLNEMNRDTGSICSAPSFATARGKRIFISK
EALCKAKNILSEDVPSNNDKEVNRCTEQSSYNHKQVQGKESGTKLEGLRRADGAEAHVSQ
GALEKAHKFLTEDKVDEKHIITWPPQEAPIENVNINNENKLEASKSGCGDGASVHSSTNI
NERGEIQGDGKHFTENLCMVNVTELHSTETEYINALAGEARGVDKSSETSEGAGQPLSTK
TKLSVCMKKPAQTWTLDDKTSKASSKDTQSSSAEFKERICNINTDTEASRDPACINIGLS
GTPEPTEEINKSFVEDGDMLENSAHRSPSPILGSQKCREISVNRYANLAVNMRLPAQRNL
KVHNYNRNQLQNCVSDVDGNLHLPLPSIEAENHSKGTCELKSIIKNPHSSDNVEITEITE
AFLNDDDWEQEETQKGLVLRRKRRQELTQEKQDNSDTNSKMQRLSTDIVQLTDESVTPPI
QDCDAEVAAEREMLRLKQIKIIRSKETVRVQPIQGSLHKIRSERKMERRPLQSLGALKIF
RGWKKVTAKTAVKYQFQVEDKRCSSVACGDECSVVPDVCGCIGVKQIEEGFLAMPGVQPG
LLPPGWLTNHYRWIVWKLAALERRLLNCQALTLENIIARLKYRYDREIDRAERPVLRKIT
ERDDIPQKTMILCVVNIMTVKHGTSDVASNEMKPVSPSGQKDLLELTDGWYSIGAVVDDA
MSRLLREGRVEIGTKLVIHGAELMGSSEACHPLEAPSTLQLRLHTNMTRRARWWSCLGLV
PQKGPMHTLIGATLSDGGLVGRMNLTLARVYPLVYFERSNGRPMFRGEKAHMRILKETQQ
EKEALMHKVVAEVERELSKETKENQQEMQPVPAMTKEEIRNLTMGRDIAKLMDQVKDPSS
LEGLLSRQQVELARSWQQHQAEDRRRNINREVERRMASHKVIYEATPLLKMRVVDHDGGG
ALVTIWRPSEDLRQTLTEGRHVCVCYLMAAGIRNGSVQLTATRQTRWERDTEHPPNSFTE
FERHVTPLCLMSSGEFEPMWKEVDVVGVVLRVGLLDKGSQIVHIVDHHLNIVALKFWGGV
KECGVEDIVKICSVVCVLNGSWRGHTGGRFGCVHITELTTITTAPRSAYLHEAVTHLKES
IKNMKNLLQEGDMKLDGQFDRRAFPADLVSVRGQTQVVEVEPCLQDGTNVCKLESGAATN
DASLLNNSSETVTDPKLVRACQRSREVRGKLKTLGQYGMPSPLRTLPSPATLGVRKPFRV
PFKQPQKCESGEDKSV
NT seq
8511 nt
NT seq
+upstream
nt +downstream
nt
atgggtacctggttgttaaccgattggctggtggtgttccagggaaacagtgttttgaga
atggagctggccatgggaagtgaggtgtcggttggggtgtatcgttggtaccaacaagtg
aagaaaaaggaccttggtgaaacaaggagagattggcttcagtaccttcgagaccaagct
cggctcagacgtcacaatgacaacacagtaagatgcatgcaggatgatgctgcagagaga
aatggaaaaatagaagaagagaaagaagaagaagaagaaaagaggagaaaggatgccgat
gaaagtacattaaatgtcggaatagcgacacattcggggcgtgagagtcccatattgcaa
agggtgctcagtaccccacaaaatagccacaagaggaggaatgtccaagggaataaccaa
aacgagctggaagcagagaatatgactactaagagcaagaaggcaagatattcgtcccca
acgactccaaaacaagagatgcggtctccattttcaatgttccaagagccgggtttcata
actccaacactcgtgttaagaaaaggtgacataggaacccccgacctctcgttattcagc
ccaacggtgcccatttcggatattttctcaccgaggacaagcacgggcaactgtaccgga
gatattgtaaccagtttaggtggtaatctggacgagtctctggtgacgtggacgagtgca
ctcgccacgcctacctcccaccctcaagctggtgagcaagatggtcgcacttctccatca
acactcgagcgcctcactttacatcctaaacaaggacttagacaaaatgtaatggctcgt
tcactcttcagtccgcacacacgatcagtcgagagtccttccagaagggagaaatgtagt
cctggtcttggtgttatcaaaggtctctctcctctgccagtgttcattaacaaactgacc
acagaggttgtggagaagacaaacatagataatgaaagtaaagagaagtttttgattaat
gatacacaaactttcagaatatcccttggtaaaaggtgcatggaatccatggaagaggac
agtcatgaaaaagttcagctttccaaaggaaggaggaggagaagcatagtaacaactgat
acagaaaatgggtttcccttggagagcacaccagatacgagacacacctggactataaag
ggtccggagagaaccagtacaccggtgagagtaacaccacagtcgaggacctctttattc
cctcgacatttggtactcgccgatgatgtcccagaacctcaagaatgctcggagatgatt
caggtaacccaaatagatcacaaggctgataatgcaaaggaaactgaaaagatgcagact
cccgagacaaatataattgtgagagagcatcttaacactaaccatattcgtgtttcttta
cagtcagatgttacagaaaattcagatgaattaagtgtgaatcctcttgatctcatttgc
tcacctgttaaggtggtaagtaagaaatgtgttgagggtatgaacagtgaggcaaagctc
aagaacacttgccaagatgtgacggctggtagtgatgtcaagataatgagcagtggtaca
aatatgaggaagccagatgctgaggaacagccagtcattattggaaatataccacaaaat
attgacacatgcacgggaccagacttaaatatcacatataacagtgatgttaatcatcac
ctagaaatgtataatcccaacagcaaattattgctgccatcagaggcagaaattattcat
gaaaaagctgaggagaaattcaaagataatgaattgaaggagtcttttatgactagaaac
caaagtacagataatagccccttaatccttgaagcaaaaacacccgaacaatctggtcag
tgcatttcagaagctgcttctcatggatcactctcagtacctttatttaagaaaacttct
tgcaaatacttagacagtaatgaagaaagtcctggccgtgatgcttctgatggtgcaaag
acaccaatatccacatcttcagactctttacagggaaagagtattttgaataagctgagt
ttacgcaagaagaaaaacttgtcgggcaagttcttgtatccttcaaaatcagaagaaggt
tacgagaaactaaagatgacatacacagaaacaattgggctggttgaaagtagttcgagc
tcattcccagagcctcaaccacctatctccaaaatacaatctgcttgttcaacaagctca
gtgctaaaggtttctcctgacattcatagtattgccaacaagcagcagaatttcctgtct
ctaacaagtctcgagaaagatacaagatttgaaagcaatgatgtttctttatcagataag
actacatattctcctttgggttttgataaagagaaatcatcaagtcccagaaaccaacta
gtacctgcagatgggaaaagattggggagccagtggagcagctcaagaagagtgtgtgtt
gcatcaccggttaccagcgtcggtgccgtcgggacggcatttgatgatccacacgacacg
ttcacagatgcagacattcttacgatcagtactcagggcaacagccagaaaccgttgaat
tctgaacaagtttatttcaatacagctttaccaaaatctaaatattgtaatgataaagtt
tctaggaggttatcaggaggtttgagcaggaaactgcagcaaaatggtgaccagtcgaag
atggtcgcctccgagtttcaggttgttcccgagagagacctaactgaagaagaaaatact
ttagctgtttcatcatattctcatggtcctgaacatgatcaattggcttcacctcatatt
ttacagcaggaaaggtttagccaaattatgaatgacagcctaaatgatgtttatttatca
gaaatggatacaaacccatgtgttccagtggtagatgaggtggttgtcaagagtcggacg
ggtgaagtgcagcaggccagtgtacttgaccttggtggtactggtgctccaagtaatacg
cttgcagcagaaactgatgataagtatcaaaatgattccagagaaaacataggttctggc
ttttatactagcagaggaaagcaaatgatagtaagcaaagaagctttggagcatgcaaag
aagctggtgaaggaattgccatctgatgggtcactaatggtagaagacacttcaagtgat
aagaagtacactgcctgtgtggctcctcgtggagtaattgctaatgataagacttgccag
ttctcagcaccagtgtccatttctggacattttcccactgtgtgtagcttcactactgct
cgagggtcaagagtgacagtgaacccagcggccgtggcgaaagccaagaagctttgggaa
gaggaaaattgcgttacggaatgtgatcccgagaatagtgatacagatgttcaagatcat
tcaaatattttacacaaggttttacaagagaaaaaggtagccattgcccacgatgataga
gatagtttaaacatacatgccttgaaaactgatacatgtgtcactgttcaagctgacagt
gaatctttgctgaataaatcttgtcaaatgttgcttaaaagaactaaggattgtgttgat
gggagaagatgtgatgggagaagtaacgacatgcaagactcctctagtaagttagttaac
aaataccagtgtgtgggtgcaccagatgaagcatcaagcagcgtgaggggatttcaaggc
ttttccacagcttctggatcaaaaattaatattagcaaagaggcattaaaaaaggctaaa
ttgttgtgggaggaaaatactggggagagcgaccctgacgaacacaaaactgtgaacata
cagaagagtgcaagaagtggacgtcgggtaccggacgcatcacatacgctgcagtcagag
cggcaagggtccaggtgttcaccagcagattataatgtgagtgagggaactgtgctgagt
gctgatagcagtaattcacccaagttaaaaacaagtcagagtgcagtttcaaaatctagc
catagtggtgtatgtgaagcccagtcacttttgaatgaaagtgaaaacttgaaaagccat
ttgagatctgaaccaattacagtgaatattatagacaaatgcaatgaaagaagtatgaaa
acattaccaataaagaataattctccagtgcctcagtcaaagcataatatggcagcttgt
atatcaaatgaaaatactaacgtaagtcatacaagtagcattggtaacatttatcaccag
tcgaaaggggaaagtttctctggttttcacacggcacgtggaaaaagagtatcattaacc
gaagcggctattgctagagccaaaactctgtgggaagaaagtgactgtaacgtaatggta
actaataactccacttcccttcaggatgacggaaataaattaattttaagcagcagaatt
ccacttttggaaaaacaaggcaatattttatctgagaatttagcaccatctcttgaagaa
cagtcaaatattacacagcaaaatgcattggaaaagcctcagcctttgcagttttgtaag
tcagagcaatctttatttgatgttaggctccctttaaatacaagttacaaagattaccag
agagcaggcacaagcaatctattatcaaagttagttataaaacaagaggagactaaacaa
tatcatctagatgaagaaaagcaatcatatttgcttaatgaaatgaatcgtgataccggt
tccatatgttcagctccaagttttgcaacagctcgtggcaagcgaatctttataagtaag
gaagctctttgtaaagctaaaaatattcttagtgaagatgtgccatcaaataatgacaag
gaagtgaacaggtgcacagagcaatcttcttataatcataaacaagttcaaggcaaggaa
tcggggacaaaattggagggcttgagaagagctgatggtgcagaggcccatgttagccag
ggtgccttggagaaggctcacaagtttcttactgaagacaaagttgatgaaaagcacatc
attacttggccaccacaagaagcaccaatagaaaatgtcaatattaataatgagaataaa
cttgaggcaagtaagagtggctgtggagacggggcgagcgttcactcttcaacgaacatt
aatgaaagaggagaaattcagggagatggaaaacatttcactgagaatttgtgtatggtg
aatgttactgagcttcatagcacagagacagagtatataaatgccttagctggcgaagca
agaggagtggataaaagctcagaaacttcggaaggtgcaggacagcctctttcaacaaag
accaagttaagtgtgtgtatgaagaaaccggcacagacttggacactagatgacaaaaca
agtaaagcttctagtaaggacacccagagttcatccgcagaatttaaagaaagaatttgt
aatataaatactgacacagaagcaagcagagatccagcatgcataaatattggcctctca
ggaactccagaacctacagaagaaatcaataaatcttttgttgaagatggagatatgctt
gaaaactctgcacacagaagtccctctcctatactgggctcgcagaaatgtagagaaatt
tctgttaataggtatgcaaatttggcagtaaatatgagactaccagcccagcgaaatctt
aaggttcacaattataacagaaatcaacttcaaaattgtgtatcggatgtggatggaaat
ctccacttgccattgccgtccatagaggcagagaaccattcaaaaggcacatgcgaattg
aaaagcataattaagaatcctcattcatcagacaatgtagaaattacagaaattactgag
gcttttttgaatgatgatgattgggaacaagaggaaacacaaaagggtttggtgttgaga
aggaaacgaaggcaagagttgacacaggagaagcaggacaacagcgacactaactccaag
atgcagagattatctacggatattgttcagcttacggatgaaagtgtaacacctcctata
caagattgtgatgcagaagtcgcagctgagagagagatgttaagattgaagcaaattaaa
attattcggtcgaaggagacggtgcgtgttcagcctattcagggatctctacataaaatt
agaagcgagagaaaaatggagagacgcccacttcagtcacttggtgcattaaagatattc
aggggatggaaaaaagtaactgcaaaaactgctgtcaagtatcagtttcaagtggaagat
aaaagatgcagcagtgtggcctgcggcgatgaatgctcagtcgttcccgatgtttgtgga
tgtattggcgtgaagcagatagaagaagggttcttggcaatgccaggagtgcagcctgga
cttcttccccctggctggctgaccaatcattaccgatggattgtgtggaaacttgcagca
ctagaaagacgcttacttaattgtcaagctctgacactagaaaacatcattgccagactc
aagtaccgttatgaccgagaaatcgaccgtgcagaacgaccagtgcttaggaagattaca
gagcgtgatgacattccacaaaaaacaatgatcctctgtgtggtcaatattatgactgtg
aagcatggaacatctgatgttgcaagcaatgagatgaaaccagtgagccccagcggacag
aaagatctcctcgagctcaccgatggctggtacagcattggtgccgttgttgacgatgca
atgtctcgcctgttacgtgagggcagagtagagattggcaccaagctggtcatccacgga
gcagaattaatgggatcatcggaggcctgtcatccattggaggcaccaagcacacttcaa
cttcgtcttcatacaaacatgactagaagagcacgctggtggtcgtgccttggtcttgtc
cctcaaaagggtccaatgcatactcttattggagcaaccttaagtgatggtggtcttgta
ggacggatgaatttaaccctggcccgggtgtatcctctggtgtattttgagcgttccaat
ggtagacctatgtttagaggtgaaaaggcacacatgagaatactaaaggaaacacaacag
gaaaaggaagccttaatgcataaggtggtggctgaagtagaaagggagttgagcaaggag
acaaaagagaaccagcaagaaatgcaacctgttccggccatgactaaagaggagattcgt
aaccttacaatggggcgagacattgccaaactcatggaccaggttaaggaccctagtagt
ttagagggtttactaagtcgccagcaggtggaactggcaagatcatggcagcagcatcaa
gcagaagacaggaggagaaacatcaatcgtgaagttgagcgcaggatggcatcacataaa
gttatttatgaagcaacgccattattaaagatgcgtgtggttgaccacgacggtggtgga
gccttggtgacgatctggagaccttcggaggacctcagacagaccctaacagaaggccgt
cacgtgtgtgtgtgttatctcatggcggcagggatcagaaatggtagtgtccagttgaca
gcaactcgacagacaagatgggagcgcgatacagagcacccgccgaatagtttcacagag
tttgagcgccacgtaactcctctgtgtctaatgtcgtcaggagagtttgagccaatgtgg
aaggaagtagatgttgttggagtggtgttgagggttggcctgctggacaagggatcacaa
atagtccatattgttgatcaccatcttaacattgttgctctcaagttttggggtggtgtc
aaggaatgtggagtagaagatattgtgaaaatatgttctgttgtatgtgtattgaacggt
agctggcggggacacacaggaggaaggtttggttgcgtccacattacagaactgacgacc
atcaccacggcacctcgaagtgcctatctacatgaagctgttactcatctcaaggagagt
attaagaacatgaagaacctgttgcaggaaggggatatgaagttagacggacagtttgat
agacgtgcgttccccgccgacctggtgtctgtacgaggccagactcaagttgtggaagtt
gagccgtgccttcaagatggtactaatgtttgcaaattagaaagtggcgctgcaacaaac
gacgctagtctcctcaacaatagcagcgagactgttactgatcctaaacttgttcgagcg
tgtcaacggagtcgagaagtgcgcggtaaacttaagacgttaggacagtatgggatgccg
tctcctctgcgtactcttccgtccccggccactcttggtgttcgtaagccctttagagtg
cctttcaagcagccacaaaagtgtgagagtggagaagacaagagtgtgtga
DBGET
integrated database retrieval system
