Procambarus clarkii (red swamp crayfish): 138349881
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Entry
138349881 CDS
T07930
Name
(RefSeq) pre-mRNA-processing-splicing factor 8-like
KO
K12856
pre-mRNA-processing factor 8
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138349881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
138349881
Spliceosome [BR:
pcla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138349881
Complex C
U5 SnRNP specific factors
138349881
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
138349881
NCBI-ProteinID:
XP_069194425
LinkDB
All DBs
Position
39:complement(4242108..4257819)
Genome browser
AA seq
2373 aa
AA seq
DB search
MALPPYLIPGSPWAYMAQQQAQLAAAQAQAHAQMHAHFQAQAQAHSQAQAIPRPQAGPPP
VENVSLEKMQEKARRWQQLHNKKYAEKRKFGFIDVQKEEMPPEHIRKIIRDHGDMSSRKY
RHDKRVYLGALKFMPHAVLKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVIEPVYI
SQWSTMWMMMRREKRDRRHFKRMRFPPFDDEEPPLDFADNVLDVEPLEAIQMELDPEEDV
EVADWFYEHKPLIDTKHVNGPTYRKWRLTLPQMATLYRLANQLLTDVSDNNYFYLFDLKS
FFTAKALNMALPGGPKFEPLIKDMNPADEDWNEFNDINKIIVRHQVRTEYRIAFPYLFNN
MPQYVHLSWYHTPVVLYIKTEDPDLPAFYFDPLINPISHRNTVKGEVLLPDDDEDFELPE
DVDALLKEWQLYDDATANGIALLWGPRPFNMRSGTMRRAIDVPLVKMWYREHCPPGQPVK
VRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQTTTLDWVEVGLQVCRQGYN
MLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHV
QYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGQVG
KGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFD
LELRASVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRY
VKMKADWWTNTAHYNRERIRRGATVDKTVCKKNMGRLTRLYLKSEQERQHNYQKDGPYIS
PEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQRE
ELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYL
DQYLWYEADKRRLFPPWVKPGDSEPPPLLVYKWCQGINNLTDVWDTADGECNVMLESKYE
KLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVDINYKDMNHTNRYGIIRGLQFASFIVQ
YYGLVMDLLVLGLKRAADMSGPPQMPNDFLNFQDVATETQHPIRLYSRYIDRIHIFFRFS
AEEAKDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLP
RSVTTINWENSFVSVYSKDNPNLLFNMSGFECRILPKCRMTHEEFKHRDGVWNLQNEVTK
ERTSQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYYRESVVNTQ
ELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRW
SKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWETEFLDSQRVWAEYALKRQEATAQNRR
LTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDG
KLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLW
QKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNYSKP
SLLADSKDTMDGSTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSLYPSPTGVL
IAIDLAYNLHSAYGNWFPGAKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY
LSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII
HTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNI
VIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKNISSYTAFSRLILILRA
LHVNNDRTKVLLKPDKTTITEPHHIWPSLTDEDWVKVEVQLKDLILADYGKKNNVNVASL
TQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNY
ETATFSSKTEWRVRAISATNLHLRTNYIYVSSDDIKETGFTYILPKNVLKKFIIISDLRT
QIAGYLYGISPPDNPQVKEIRCIVMPPQWGTHQMVHLPHKLPTHEFLNELEPLGWIHTQP
NELPQLSPHDITTHATVMADNSSWTTDRTIVITCSFTPGSCSLQAYKLTPSGFEWGRNNK
DMGNNPKGYLPSHYEKVQMLLSDRFLGLFMTPLQASWNYNFMGVRHDPNMKYDLQLASPK
EFYHEVHRPAHFLNFSSLDEADTAGADRDNSLE
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcctccgtaccttattccgggcagcccatgggcttacatggcccagcagcag
gctcagcttgctgctgctcaggcccaggcccatgctcagatgcatgcacactttcaagct
caagcccaagcccattctcaggctcaggccatcccacgacctcaggctgggcctccacca
gttgaaaatgtttccttggagaagatgcaggaaaaagctcgcagatggcaacagcttcac
aataagaagtatgcagaaaaaaggaagtttggctttattgatgtgcagaaagaagagatg
cctccagaacacatccgcaagattattcgtgaccatggtgacatgtcaagccgtaaatac
cgtcatgacaagcgtgtatatttgggagcactaaagttcatgccccatgctgtactgaag
ttgcttgaaaacatgccaatgccttgggaacagataagggatgtccaggttctgtaccat
atcaccggagcaatcacatttgtcaacgagatcccatgggtgattgagccagtctacatc
tcccagtggtctaccatgtggatgatgatgcgacgagaaaagagagatcgacgacacttc
aagaggatgagatttcctccatttgatgacgaggagccacctctggattttgcagataat
gtgttggatgtagaaccacttgaagccattcaaatggaattagaccctgaggaagatgtg
gaggttgcagattggttttatgagcacaagcctctaatagatacaaagcacgttaatggc
cctacatatcgcaagtggcgtctgactcttcctcaaatggctacgttgtatcgacttgca
aatcaattgctaacagatgtttctgataacaattacttttatctgtttgatttgaagtct
ttcttcacagcaaaggcattgaatatggctttacctggtggaccaaagtttgaaccatta
attaaggatatgaaccctgctgatgaagactggaatgaatttaatgatataaacaagatc
attgtgcgccaccaagtgcgaacagagtacagaatagctttcccgtatctgtttaacaac
atgccccagtatgttcatctcagctggtatcatactccagttgttctttacatcaaaaca
gaggaccctgacctcccagccttttattttgatcctctgattaaccccatctctcaccgc
aacactgtgaaaggggaggttctgttaccagatgatgatgaggactttgaattaccagaa
gatgtagatgcactactgaaggaatggcagctttatgatgatgcaactgccaatggtatt
gccttgttgtgggggccccggccattcaacatgcgttctggcacaatgagaagagctatc
gatgtccctctggttaagatgtggtatcgtgagcattgccctccaggtcaaccagttaag
gtacgtgtgtcataccagaagctgttgaagtattatgtcctgaatgctctgaagcaccgt
ccacccaaagctcagaaaaagcgctacttgttccgttctttcaaagccaccaagtttttc
cagactacaactttagattgggttgaggttggcctacaagtctgccgtcaggggtataac
atgctcaatctccttattcatcgcaaaaatcttaattatttgcacttggattacaacttc
aacttgaaacctgttaaaaccctgacaactaaagaacgaaagaagtcaaggtttggaaat
gcatttcacttatgtcgtgaaattttgagattaacaaaattggtggttgatgctcatgtg
caatacaggctaaacaatgtcgatgcatttcagctagcagatggccttcagtacattttt
gcacatgttggtcagctgactggtatgtataggtacaaatacaaactcatgagacagata
agaatgtgcaaagatctcaagcatgtcatctactacaggttcaacacaggtcaagtaggt
aaaggccctggttgtggtttttgggctccagggtggagggtttggcttttcttcatgagg
ggaattaccccactgttagagcgctggctgggtaacctcctctctcgtcagtttgaaggc
cgacatagtaaaggtgtggccaagactgtgaccaagcagcgagtagaatctcattttgat
cttgagttacgagcctcagttatgcatgacatactggatatgatgccagagggtatcaaa
caaaataaagctcgaaccattcttcagcatttatctgaggcctggcgatgctggaaagca
aacattccctggaaagtacctggccttccaacacccattgagaatatgattcttcgttat
gtgaagatgaaggcagattggtggaccaacacggctcattacaaccgtgaacgtattcgc
cgtggtgcaacagtagacaaaactgtttgcaaaaagaatatgggtcgacttacacggtta
tatctgaaatctgaacaggaacgacagcacaactaccagaaagatggaccttacatcagt
cctgaggaagccgttgccatttacactaccacagtccattggctagagtcacggcgcttt
gctcccattccttttccaccactctcttacaaacatgacacaaaattgcttatcctggct
ttggaaagactaaaagaagcatacagtgtaaaatcacgcttaaatcaatctcagagagag
gagttgggcctcattgaacaagcttatgataaccctcacgaggccctgtctcgtataaag
cgtcatttgctaactcagagagctttcaaggaggtaggcattgaattcatggacctgtac
agtcatttaattcctgtttatgatgtggagcctcttgagaaaattacagatgcttatctg
gatcagtacctctggtatgaagcagataagcgccgtctgttcccaccatgggttaaacct
ggcgactcagaaccaccaccacttcttgtgtataagtggtgccaaggaattaataacctt
actgatgtttgggatacagctgatggagagtgcaatgtaatgttggagtcaaagtatgag
aagctgtatgaaaagattgatcttactctgcttaacaggttgttgagattgatagtggac
cataatattgctgattacatgacagctaagaacaatgtagatattaactataaagacatg
aatcatactaaccgttatggcattatccgaggtctgcaatttgcttcttttattgtacag
tattatggtctagtaatggacttgctggtcctgggtctgaaacgtgcagcagacatgtct
ggtcctcctcaaatgcccaatgatttcttaaatttccaggatgttgccacagaaacgcag
catcccatcagactttactcccgatatattgacagaatacacatattcttccgcttttcg
gctgaagaggcaaaagatctcatccaacgctatcttacagagcatcctgatccaaataat
gagaatattgtaggttacaacaataagaagtgttggccaagggatgcaaggatgagactc
atgaaacacgatgtcaacttggggcgtgctgtgttctgggacataaaaaacagattgcct
cgatctgtcacaaccatcaactgggagaattcatttgtgtctgtgtattctaaagacaac
cctaatcttttattcaacatgtctggctttgaatgtcgtattttacccaaatgtcgcatg
acccatgaggagttcaagcacagggatggtgtgtggaacttgcagaatgaagtaaccaaa
gaacgaacttcacagtgcttcttgcgggtagatgatgaatccatgcagagattccacaat
cgtgtcagacaaattctcatggcctctggttctacaacatttacaaagattgtcaacaaa
tggaatacagcattgattggtctcatgacatattaccgagagagtgtagttaacactcaa
gagcttttagatctactggttaaatgtgaaaataagattcagacacgtattaagattggc
ttgaattccaagatgccctccagatttcccccagtagtattttacactccaaaagaattg
ggaggccttggtatgttgtcaatgggtcatgtgctcattccgcaatctgatctgcgatgg
agcaagcaaactgacgtaggtataacccactttagatctggaatgagtcatgatgaagac
caacttattcctaacctctatagatacattcaaccttgggaaacagagttccttgactca
cagagagtgtgggcagaatatgccctgaagagacaagaagcaactgcacaaaatcgtcgt
cttactctagaagatttggaagattcttgggatagaggtattcctaggatcaacacgctt
tttcaaaaagatcgtcacaccctggcttatgacaaaggatggagaatacgtacagagttt
aagcagtatcaggtgcttaagcaaaatccattctggtggacacatcagcgccacgatggt
aaactgtggaatttgaataactatcgtactgatatgatccaagcactgggtggtgtagag
gggattttagaacatacactcttcaaaggcacctactttcccacatgggaggggttgttt
tgggaaaaagcatctggttttgaagagagcatgaaatacaagaaactgactaatgcccaa
aggtctggtcttaaccaaatccccaaccgtaggtttactctttggtggtcaccaaccatt
aacagagccaatgtgtatgtaggcttccaggtacaacttgatctgacaggcatattcatg
catggcaaaattcctactctcaagatttccctcatccagattttccgtgcccatctttgg
caaaagatccatgaatctgtggtaatggatctttgtcaagtctttgatcaagaacttgat
gctctagaaattgaaactgtacaaaaggagaccatacatcctaggaagtcatacaagatg
aattcctcatgtgcagacatcttgttgtttgcggcatacaaatggaattattcaaagcct
tcacttctggcagattcaaaggatacgatggatggatcaaccacacaaaagtactggatt
gatgttcagctaagatggggtgactatgattctcatgatgttgaacgttatgcaagagca
aagttcttggactacactactgataacatgtctttatacccatctccaacaggtgtgttg
attgcaattgatttagcttataacctacatagtgcatatggcaactggttcccaggtgcc
aaacctttgatacagcaagccatggcaaagatcatgaaagccaacccagctctctatgtg
ctacgcgaacgcatccgcaagggtcttcagctttattcttctgaacccacagaaccatac
ctctcttctcagaattatggtgaattattctctaatcaaattatttggtttgtggatgat
accaatgtatacagagtaactattcataagacctttgagggtaatttgacaacaaagcca
atcaatggtgcaattttcatcttcaatccacgtacaggtcagctcttcttaaagatcatt
cacacatctgtgtgggcaggtcaaaagcgtcttggtcagttggctaaatggaaaacagct
gaggaagttgctgccttaattagatctttgcctgtagaagagcagccaaaacagatcatt
gtaactcgaaaaggtatgttggatcctcttgaggtgcatttgcttgattttcccaatatt
gtgatcaagggctcagagctacaactgcctttccaggcttgccttaaggtagagaaattt
ggtgatcttatccttaaagctactgaaccccagatggttttgtttaatctttatgatgat
tggctcaaaaatatatcatcttacacagccttctctcgtcttattcttatattacgagct
cttcatgtcaataatgaccgtacaaaggttcttttgaaaccagacaagaccactattaca
gaacctcaccatatttggccctctcttacagatgaagactgggttaaagttgaagtacag
ctcaaagatcttattcttgctgattatggtaaaaagaacaatgtgaatgtagcatctctt
actcagtcagaaatcagagatatcattcttggtatggaaattagtgcaccatcagcacaa
cgacagcagattgcagaaattgagaaacagactaaagaacagtctcagcttactgccaca
actaccagaactgtcaataagcatggtgatgaaataatcacctctactaccagcaactat
gaaactgcaacgttcagtagcaagacagaatggagagtaagagcaatttctgctacaaat
cttcatttgagaacaaattacatctatgtatcttctgatgacataaaggagactggattc
acttacatcttgcccaaaaatgtgttgaaaaaatttatcatcatctctgatcttcgcaca
caaatagcaggctacctgtatggtattagtcccccagacaaccctcaagtaaaagaaatc
cggtgtattgtcatgccaccacaatggggaacacatcagatggttcacctgccacataag
ctgcctactcatgaatttttgaatgaattagagcctctgggatggattcatacccaacct
aatgaattgccacagctttctccccatgatattaccacacatgccactgtgatggctgat
aatagttcatggaccacagaccgtacaatagttattacatgttcattcacgccagggtct
tgttcattgcaagcatacaagctcacgccatctggttttgaatggggtcgcaacaacaaa
gacatgggcaataatcccaaaggttatttgccttcccattacgaaaaagttcaaatgctg
ctttcagatcgcttcctggggcttttcatgactcctttgcaagcttcttggaattacaat
ttcatgggagtacggcatgatcccaatatgaagtatgacttacaattggctagtcctaaa
gaattctatcatgaggttcatcgtccggctcatttccttaacttttcatccctggatgaa
gcagacacagctggagcagacagagacaactcgttggagtaa
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