Procambarus clarkii (red swamp crayfish): 138351330
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Entry
138351330 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent helicase brm-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138351330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
138351330
03036 Chromosome and associated proteins [BR:
pcla03036
]
138351330
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138351330
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138351330
Chromatin remodeling factors
BAF complex
138351330
PBAF complex
138351330
GBAF(ncBAF) complex
138351330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
QLQ
HDA2-3
BRK
ResIII
DEAD
SnAC
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
138351330
NCBI-ProteinID:
XP_069159131
LinkDB
All DBs
Position
49:16929853..16959332
Genome browser
AA seq
1362 aa
AA seq
DB search
MSAQSPNPGSAASPMGPPQQSLSPMPPPQATSPAVGPPQAPSPMGPPQAPSPMGPPVMSP
GPGVPPTQQGPPGGPGMSPQGGPSPHHSYPQGPQGGQGWPQTAGSYPNSYPPQPQSQQGS
SMGPNSHHPSQGPPGGPSGGGLPPPSGGGPNGPSPSGGSFQQENLNALQKAINTMEDKGL
QNDPRYTDLVNMRAKYGNMNMGPPPPGSGSTSGGSVPPGPPSGPGYGPPGAGVPDAQRAG
LLNPSQMHQLRAQIMAYRCIARNQPVPSHVSALAQGRRAEQDPTRPPGPGLPGPQGPPSG
PPSGPPTGPPAGPPTGPPTGPPTGPPTGPPGVQGPPGPPGPPGPPSMQYPRHPGPMPGVR
PPYNGTGPSQTPPPPSGVMSSQPVPTGPVPGTTPRPQVPPAAVGTTPVPTAGGKTSRVTP
ITKPSGVDPLILLQERENRLAARIAHRIEELSGLPATMAEDLKTKAQIELRALRLLNFQR
QLRAEVVSCNRKDTTLETAINIKAYKRTKRQGLREARITEKLEKQQKLEAERKKRQKHQE
YLNAVLQHGRELKEFHRQNNQKISKLNKSLILHHMNAEREKQKEQERIEKERLRRLMLED
EEGYRKLIDEKKDKRLAYLLTQTDEFIANLTEMVKAHKEDQRLKHREERKKAREERRRXR
EAIADNGEEGDNQKRHIPVMESATGAIVCGLQAPLEENLEAFLTANPGWEILPEEDTESS
DEDESKVEKEKVKEPESTSEEKVEPVLDEDGNPREVVFKKAKVEDDEYKDASGEKNYYSI
AHTIKETVTEQAKMMVNGLLKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALLT
YLIETKKNNGPYLIIVPLSTISNWALEXEKWAPTVQVVTYKGSPQVRRIVQSQMRATKLN
VLLTTYEYIIKDKAVLSKLRWKYMIIDEGHRMKNHHCKLTQTLNTFYNAPHRLLLTGTPL
QNKLPELWXLLYFLLPSIFKSCSTXEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP
FLLRRLKREVEAQLPDKVEYIIKCEMSGLQHVLYRSMQTRGVMLCAEDKKGQKSNTKALM
NTIMQLRKLCNHPFMFQHIEEAYCNHTGFAGGIVQGPDLYRASGKFELLDRILPKLKTSD
HRVLLFCQMTQLMTIMEDYLMYKGFKYLRLDGMTKSEDRGELLRLFNTSREYFLFLLSTR
AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNTVEERILAA
ARYKLNMDEKVIQAGMFDQKSTGSDRRQFLQAILSNDNEDDEEEDEAPDDETINQMIARG
EDEFEIFQKIDDERKKESTRPRLMAEDELPEWMLREEDSVSV
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcaaagtcccaatcctgggagtgcagcatccccaatgggtccgccccagcag
tccctttctcctatgcctccaccccaggctacatctccagccgttgggccacctcaggct
ccatctccaatgggtccaccacaggcaccatcacccatgggtcctccagtaatgtcacca
ggtcctggtgtaccaccaacacagcagggacctccagggggccctggcatgtcacctcag
ggtggaccaagccctcaccactcttaccctcagggtccacaaggaggccagggttggcca
caaactgctggttcatatcccaacagttatcctccacagcctcaatcacagcagggatca
tcgatgggccctaacagtcaccacccttcccagggtcctcccggtggcccttcaggtggt
ggactgcctccaccaagtggtggtggaccaaatggtccgagtccaagtggtggtagcttt
cagcaggagaaccttaatgctttgcaaaaagctatcaacacaatggaggacaagggttta
caaaatgatccacgttatactgatttagttaacatgagggctaagtatggtaatatgaat
atgggtccaccaccaccaggcagtggttctacaagtggtggtagtgttccaccaggccct
ccaagtggacctggatatggccctcctggtgctggggtccctgatgcacaaagagcaggt
ttgctaaatccttcacaaatgcatcagcttcgggcccaaataatggcctatcgttgcatt
gctcgtaatcaaccagttccaagccacgtgtctgctcttgctcagggtcgccgggctgaa
caagaccctactcggccacctggacctggtcttcctggaccacaaggacccccaagtgga
ccaccaagtggaccaccaactggccctccagcaggtcctcctactggccctccaactgga
ccaccaactggacctcccactggacctcctggtgttcagggtccaccaggcccaccagga
ccccctggaccacccagtatgcagtatccaagacaccctggaccaatgccaggggtgcgg
ccaccatacaatggaacaggcccatcacagacaccacccccaccatctggtgtcatgagc
tcccaacctgtaccaactggacctgtacctgggaccaccccaaggcctcaggtgcctcca
gcagctgttgggacaacccctgtgcctactgctggtggcaaaacgagccgtgttactcct
attactaagccctctggggtggatcccttgatacttctacaggagagagaaaacagatta
gctgcacgtattgctcatcgaattgaagaattgagtggccttccagcgacaatggcggaa
gatttaaaaacaaaagctcagattgagcttcgagcattacgcttactcaatttccaacgc
caattaagggccgaggttgtaagctgcaatcgaaaagatacaactttagaaaccgctatt
aatataaaggcatacaagagaaccaaacggcaaggtctgagagaagctcgtattactgaa
aaactagaaaagcaacagaaattagaggccgagcgaaagaagcggcaaaagcaccaagaa
taccttaatgcagtgctacagcatggtagagaactgaaggagttccatcgccaaaataat
cagaagattagtaaattaaataagtctctcatactgcaccatatgaatgctgagagagag
aagcaaaaggaacaggagcgcatagagaaggaacggttgaggcgcctcatgctggaggat
gaggaaggctatcgtaaattgattgatgaaaagaaagataaacgtttagcgtaccttctc
actcagactgacgagtttattgccaacctgacagagatggtcaaagctcataaagaggat
cagcgactgaaacatcgagaagagaggaagaaagctcgtgaggaacgtcgtcgtngccgg
gaggccattgctgataatggtgaagagggcgacaatcagaagcggcatattcctgttatg
gaatcggcgaccggagccattgtttgtggcttacaggctcctctggaggaaaatcttgaa
gcatttttgactgccaatcctggctgggaaattctacccgaggaagatacagagtcgtct
gatgaagatgaatcaaaagtagaaaaggaaaaagtgaaagagcctgagtcaacaagtgaa
gaaaaagtagaaccggtcctagatgaagatggcaatcccagggaggtggtgttcaagaag
gccaaggtggaggatgatgagtacaaagatgcatcgggagagaagaactattactccata
gctcacaccattaaggaaactgtaacagagcaagccaaaatgatggtcaatggacttctc
aaagaatatcaagtgaagggtcttgagtggcttgtgtccttgtataacaataatcttaat
ggtatcctggctgatgagatgggcctgggaaaaactatccagactattgcacttctcaca
tacttaattgagaccaagaagaataatggaccatatctcatcattgtacccctctccacc
atatctaattgggctcttgagnttgaaaaatgggctccaactgttcaggttgtgacttac
aaagggtcacctcaggttcggcggattgttcaaagtcagatgagagccacgaagctcaat
gttttgctcaccacatatgaatatattataaaggataaagcagtgttatccaagttgcga
tggaaatacatgataatcgacgagggtcaccgcatgaagaaccaccattgcaaacttaca
cagacactgaacacgttctacaatgcaccacatcgcttattgctgacgggaacaccactt
cagaacaagctgccggagctatggnctcttctatacttccttcttccatccatctttaaa
tcttgctctacanttgagcagtggttcaatgctccctttgcaactactggtgaaaaggtt
gaattaaatgaagaagaaactatcttgatcattcggcgtctgcataaagttcttaggcca
tttttactacgtcgactcaagagagaagttgaggcccaattaccagacaaggtggaatac
atcatcaagtgtgaaatgtcgggtctacaacatgttttataccgctccatgcagacaagg
ggagtcatgttgtgtgctgaagataagaaaggtcagaagagtaataccaaggctctcatg
aacaccattatgcagcttcgtaaactttgtaaccatcccttcatgttccaacacattgag
gaagcctattgcaatcatactggatttgcaggtggcattgttcagggaccagatctatac
cgtgcatctggcaaatttgagcttctagaccggatcttgcctaaactgaagaccagtgat
caccgagtgctgctcttctgccagatgacacagcttatgactattatggaggattacctc
atgtataaaggcttcaaatacttgagacttgatggtatgactaaatcagaagaccgtggt
gagcttttacgtctattcaatacatctagagaatatttcttgttcctgttgtcgacccgt
gcaggtggtttaggactgaacctccagtctgccgacacagttatcattttcgattcagat
tggaatccacaccaggatcttcaggcccaagatcgtgcccatcgtattggccagaaaaat
gaggtgagagtgttgcgtctgatgactgtgaacaccgttgaagaacgtatcttggcggct
gctcggtataaactcaacatggatgagaaggttattcaagcgggtatgtttgatcagaag
tctactggatctgatcgacgacagttccttcaggctattctttccaatgacaatgaagat
gatgaagaagaggatgaagccccagacgatgaaactattaatcagatgattgctcgtgga
gaagatgaatttgaaatctttcagaaaattgatgacgaaagaaagaaggaatcaactagg
ccacgtcttatggccgaggatgaattacccgagtggatgttgagggaggaagattcagta
agtgtttaa
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integrated database retrieval system
